BLASTX nr result

ID: Glycyrrhiza23_contig00021561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021561
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ...   143   2e-32
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   135   3e-30
ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30

>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  144 bits (364), Expect = 6e-33
 Identities = 67/73 (91%), Positives = 69/73 (94%)
 Frame = -1

Query: 252 YNMVLKLLIRIGRFDKATEVWENMGDKKFYPSVSTYSVMIHDLCKKKGKLEEACKYFEMM 73
           YNMVLKLLIRIGRFDK TEVWENM DKKFYPSVSTYSVMIH  CKKKGKLEEACKYFEMM
Sbjct: 394 YNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMM 453

Query: 72  VDEGIPPYVTTIE 34
           +DEGIPPYVTT+E
Sbjct: 454 IDEGIPPYVTTVE 466


>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/73 (90%), Positives = 69/73 (94%)
 Frame = -1

Query: 252 YNMVLKLLIRIGRFDKATEVWENMGDKKFYPSVSTYSVMIHDLCKKKGKLEEACKYFEMM 73
           YNMVLKLLIRIGRFDK T+VW NMGDKKFYPSVSTYSVMIH  CKKKGKLEEACKYFEMM
Sbjct: 394 YNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMM 453

Query: 72  VDEGIPPYVTTIE 34
           +DEGIPPYVTT+E
Sbjct: 454 IDEGIPPYVTTVE 466


>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524756|gb|AET05210.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/73 (93%), Positives = 69/73 (94%)
 Frame = -1

Query: 252 YNMVLKLLIRIGRFDKATEVWENMGDKKFYPSVSTYSVMIHDLCKKKGKLEEACKYFEMM 73
           YNMVLKLLIRIGRFDKATEVWE MGDKKFYPSVSTYSVMIH LCKKKGKLEEACKYF MM
Sbjct: 391 YNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMM 450

Query: 72  VDEGIPPYVTTIE 34
           +DEGIPPY TTIE
Sbjct: 451 IDEGIPPYDTTIE 463


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/73 (82%), Positives = 69/73 (94%)
 Frame = -1

Query: 252 YNMVLKLLIRIGRFDKATEVWENMGDKKFYPSVSTYSVMIHDLCKKKGKLEEACKYFEMM 73
           YNM+LKLLIR+GRFD+A EVWE+MG+K FYPSVSTYSVM+H LCKKKGKLEEACKYFEMM
Sbjct: 391 YNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 450

Query: 72  VDEGIPPYVTTIE 34
           +DEGIPPY +T+E
Sbjct: 451 IDEGIPPYSSTVE 463


>ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|222848249|gb|EEE85796.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/73 (79%), Positives = 69/73 (94%)
 Frame = -1

Query: 252 YNMVLKLLIRIGRFDKATEVWENMGDKKFYPSVSTYSVMIHDLCKKKGKLEEACKYFEMM 73
           YNM+LKLL+R+GRFD+ATE+WE+MG++ FYPSVSTYSVMIH LCKKKGKLEEAC+YFE M
Sbjct: 395 YNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETM 454

Query: 72  VDEGIPPYVTTIE 34
           +DEGIPPY +TIE
Sbjct: 455 IDEGIPPYASTIE 467


Top