BLASTX nr result
ID: Glycyrrhiza23_contig00021531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00021531
(670 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003619828.1| Pentatricopeptide repeat-containing protein ... 375 e-102
gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana] 249 3e-64
gb|AAF16672.1|AC012394_21 hypothetical protein; 84465-87513 [Ara... 249 3e-64
ref|NP_001185409.1| pentatricopeptide repeat-containing protein ... 249 3e-64
ref|NP_001031285.4| pentatricopeptide repeat-containing protein ... 249 3e-64
>ref|XP_003619828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494843|gb|AES76046.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 895
Score = 375 bits (964), Expect = e-102
Identities = 189/221 (85%), Positives = 203/221 (91%)
Frame = -1
Query: 664 MYLPATISASIEQQIFCMGNKKAMSAEINGLNGQKHSLLMKVFRWSFNDIIHGCAKQKNY 485
MYLP +SAS EQQI CM +KKA S EINGLNG+KHSL MKV RWSFNDIIHGCA +KNY
Sbjct: 318 MYLPNIVSASKEQQIICMDDKKAKSGEINGLNGKKHSLPMKVLRWSFNDIIHGCANEKNY 377
Query: 484 VLAWKLILQMQNLGLQPSSHTYDGIIRAVVSQRSFGDAMGVLQKMQQENLKPYDSTLATL 305
+LAWKLILQMQ+LGLQPSSHTY+G+IRA+VSQR FGDAM +L+KMQQENLK DSTLATL
Sbjct: 378 MLAWKLILQMQSLGLQPSSHTYNGLIRAIVSQRRFGDAMRMLKKMQQENLKLVDSTLATL 437
Query: 304 SVTCSKELQLDLAESLLNQISECLHPHPYNALLASCDALNQPERAVRVFAKMMQIKLLPD 125
SV S+ELQLDLAESLLNQISECL+PHPYNALLASCDALNQPERAVRVFAKM +IKLLPD
Sbjct: 438 SVAFSRELQLDLAESLLNQISECLYPHPYNALLASCDALNQPERAVRVFAKMRKIKLLPD 497
Query: 124 MRTYELLFSLFGTVNAPYEDSNMLSQVDAAKRINAIERDMA 2
MRTYELLFSLFG VNAPYEDSNMLSQVDAAKRINAIERDMA
Sbjct: 498 MRTYELLFSLFGIVNAPYEDSNMLSQVDAAKRINAIERDMA 538
>gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana]
Length = 800
Score = 249 bits (636), Expect = 3e-64
Identities = 124/188 (65%), Positives = 148/188 (78%)
Frame = -1
Query: 568 GQKHSLLMKVFRWSFNDIIHGCAKQKNYVLAWKLILQMQNLGLQPSSHTYDGIIRAVVSQ 389
G L ++V RWSFND+IH C + KN LA +L+LQMQNLGL PSSHTYDG IRAV
Sbjct: 274 GHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFP 333
Query: 388 RSFGDAMGVLQKMQQENLKPYDSTLATLSVTCSKELQLDLAESLLNQISECLHPHPYNAL 209
+ M +L+ MQQ+NLKPYDSTLAT++ CSK LQ+DLAE LL+QISEC + +P+N L
Sbjct: 334 EGYEYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNL 393
Query: 208 LASCDALNQPERAVRVFAKMMQIKLLPDMRTYELLFSLFGTVNAPYEDSNMLSQVDAAKR 29
LA+ D+L+QPERAVRV A+M ++KL PDMRTYELLFSLFG VNAPYE+ NMLSQVD KR
Sbjct: 394 LAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKR 453
Query: 28 INAIERDM 5
INAIE DM
Sbjct: 454 INAIEMDM 461
>gb|AAF16672.1|AC012394_21 hypothetical protein; 84465-87513 [Arabidopsis thaliana]
Length = 558
Score = 249 bits (636), Expect = 3e-64
Identities = 124/188 (65%), Positives = 148/188 (78%)
Frame = -1
Query: 568 GQKHSLLMKVFRWSFNDIIHGCAKQKNYVLAWKLILQMQNLGLQPSSHTYDGIIRAVVSQ 389
G L ++V RWSFND+IH C + KN LA +L+LQMQNLGL PSSHTYDG IRAV
Sbjct: 61 GHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFP 120
Query: 388 RSFGDAMGVLQKMQQENLKPYDSTLATLSVTCSKELQLDLAESLLNQISECLHPHPYNAL 209
+ M +L+ MQQ+NLKPYDSTLAT++ CSK LQ+DLAE LL+QISEC + +P+N L
Sbjct: 121 EGYEYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNL 180
Query: 208 LASCDALNQPERAVRVFAKMMQIKLLPDMRTYELLFSLFGTVNAPYEDSNMLSQVDAAKR 29
LA+ D+L+QPERAVRV A+M ++KL PDMRTYELLFSLFG VNAPYE+ NMLSQVD KR
Sbjct: 181 LAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKR 240
Query: 28 INAIERDM 5
INAIE DM
Sbjct: 241 INAIEMDM 248
>ref|NP_001185409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197699|gb|AEE35820.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 801
Score = 249 bits (636), Expect = 3e-64
Identities = 124/188 (65%), Positives = 148/188 (78%)
Frame = -1
Query: 568 GQKHSLLMKVFRWSFNDIIHGCAKQKNYVLAWKLILQMQNLGLQPSSHTYDGIIRAVVSQ 389
G L ++V RWSFND+IH C + KN LA +L+LQMQNLGL PSSHTYDG IRAV
Sbjct: 318 GHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFP 377
Query: 388 RSFGDAMGVLQKMQQENLKPYDSTLATLSVTCSKELQLDLAESLLNQISECLHPHPYNAL 209
+ M +L+ MQQ+NLKPYDSTLAT++ CSK LQ+DLAE LL+QISEC + +P+N L
Sbjct: 378 EGYEYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNL 437
Query: 208 LASCDALNQPERAVRVFAKMMQIKLLPDMRTYELLFSLFGTVNAPYEDSNMLSQVDAAKR 29
LA+ D+L+QPERAVRV A+M ++KL PDMRTYELLFSLFG VNAPYE+ NMLSQVD KR
Sbjct: 438 LAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKR 497
Query: 28 INAIERDM 5
INAIE DM
Sbjct: 498 INAIEMDM 505
>ref|NP_001031285.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197698|gb|AEE35819.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 249 bits (636), Expect = 3e-64
Identities = 124/188 (65%), Positives = 148/188 (78%)
Frame = -1
Query: 568 GQKHSLLMKVFRWSFNDIIHGCAKQKNYVLAWKLILQMQNLGLQPSSHTYDGIIRAVVSQ 389
G L ++V RWSFND+IH C + KN LA +L+LQMQNLGL PSSHTYDG IRAV
Sbjct: 322 GHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFP 381
Query: 388 RSFGDAMGVLQKMQQENLKPYDSTLATLSVTCSKELQLDLAESLLNQISECLHPHPYNAL 209
+ M +L+ MQQ+NLKPYDSTLAT++ CSK LQ+DLAE LL+QISEC + +P+N L
Sbjct: 382 EGYEYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNL 441
Query: 208 LASCDALNQPERAVRVFAKMMQIKLLPDMRTYELLFSLFGTVNAPYEDSNMLSQVDAAKR 29
LA+ D+L+QPERAVRV A+M ++KL PDMRTYELLFSLFG VNAPYE+ NMLSQVD KR
Sbjct: 442 LAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKR 501
Query: 28 INAIERDM 5
INAIE DM
Sbjct: 502 INAIEMDM 509