BLASTX nr result

ID: Glycyrrhiza23_contig00021479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021479
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago trunca...    90   2e-16
ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like...    88   8e-16
ref|XP_003520283.1| PREDICTED: 54S ribosomal protein L12, mitoch...    86   2e-15
ref|XP_003548868.1| PREDICTED: 50S ribosomal protein L7/L12-like...    84   9e-15
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...    72   5e-11

>ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago truncatula]
           gi|355523407|gb|AET03861.1| 50S ribosomal protein L12-2
           [Medicago truncatula] gi|388508470|gb|AFK42301.1|
           unknown [Medicago truncatula]
          Length = 195

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/76 (67%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
 Frame = +1

Query: 1   ELPIAMLMVPGMGIRGVPRGVPXXXXXXXXXXXXXXXXXX--TAFDVKLDGFEAASKIKV 174
           ELPI MLMVPGMGIRG+PRGV                     TAFDVKLDGF+AASKIKV
Sbjct: 84  ELPIMMLMVPGMGIRGMPRGVGGGKGGGGSEKGGEVKKVEEKTAFDVKLDGFDAASKIKV 143

Query: 175 IKEVRTFTSLGLKEAK 222
           IKEVR+FTSLGLKEAK
Sbjct: 144 IKEVRSFTSLGLKEAK 159


>ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 194

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/74 (66%), Positives = 52/74 (70%)
 Frame = +1

Query: 1   ELPIAMLMVPGMGIRGVPRGVPXXXXXXXXXXXXXXXXXXTAFDVKLDGFEAASKIKVIK 180
           ELPIAMLMVPGMG   VPRGVP                  T FDVKL+GF+AA+KIKVIK
Sbjct: 88  ELPIAMLMVPGMG---VPRGVPNGGGGGAAGVAEVKAVEKTVFDVKLEGFDAATKIKVIK 144

Query: 181 EVRTFTSLGLKEAK 222
           EVRTFTSLGLKEAK
Sbjct: 145 EVRTFTSLGLKEAK 158


>ref|XP_003520283.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Glycine
           max]
          Length = 199

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/75 (65%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
 Frame = +1

Query: 1   ELPIAMLMVPGMGI-RGVPRGVPXXXXXXXXXXXXXXXXXXTAFDVKLDGFEAASKIKVI 177
           ELPIAMLMVPGMG+ RG+PRG                    TAFDVKL+GF+AA+KIKVI
Sbjct: 90  ELPIAMLMVPGMGVPRGIPRGAAKGGGAATGGAEVKAAEK-TAFDVKLEGFDAAAKIKVI 148

Query: 178 KEVRTFTSLGLKEAK 222
           KEVRTFTSLGLKEAK
Sbjct: 149 KEVRTFTSLGLKEAK 163


>ref|XP_003548868.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 191

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/74 (63%), Positives = 51/74 (68%)
 Frame = +1

Query: 1   ELPIAMLMVPGMGIRGVPRGVPXXXXXXXXXXXXXXXXXXTAFDVKLDGFEAASKIKVIK 180
           ELPIAM+MVPGMG   VPRGVP                  TAFDVKL+GF+ A+KIKVIK
Sbjct: 85  ELPIAMVMVPGMG---VPRGVPKGGGGGTVGVAEVKAAEKTAFDVKLEGFDVAAKIKVIK 141

Query: 181 EVRTFTSLGLKEAK 222
           EVR FTSLGLKEAK
Sbjct: 142 EVRMFTSLGLKEAK 155


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
 Frame = +1

Query: 1   ELPIAMLMVPGMGI---RGVPRGVPXXXXXXXXXXXXXXXXXXTAFDVKLDGFEAASKIK 171
           E+P+  +M+PGMG    RG  +G P                  TAFDVKLD F+AASKIK
Sbjct: 96  EMPVMTMMMPGMGFGGFRGAGKGGPGAKGVEEKKEEK------TAFDVKLDAFDAASKIK 149

Query: 172 VIKEVRTFTSLGLKEAK 222
           +IKEVRTFT+LGLKEAK
Sbjct: 150 IIKEVRTFTNLGLKEAK 166


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