BLASTX nr result

ID: Glycyrrhiza23_contig00021453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021453
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598630.1| E3 ubiquitin-protein ligase SINAT5 [Medicago...   231   7e-59
ref|XP_003546723.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   215   3e-54
ref|XP_003542831.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   215   3e-54
emb|CCG06553.1| E3 ubiquitin ligase-like protein [Lotus japonicus]    211   4e-53
ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   204   9e-51

>ref|XP_003598630.1| E3 ubiquitin-protein ligase SINAT5 [Medicago truncatula]
           gi|158516796|gb|ABW70161.1| SINA3 [Medicago truncatula]
           gi|355487678|gb|AES68881.1| E3 ubiquitin-protein ligase
           SINAT5 [Medicago truncatula]
          Length = 304

 Score =  231 bits (588), Expect = 7e-59
 Identities = 113/143 (79%), Positives = 114/143 (79%)
 Frame = -3

Query: 430 MASGNPFFDDIRSRSGVDPPQIEXXXXXXXXXXXXXXXXXXPPQIEESTEIPELVNDHIQ 251
           M S NPFFDDIRSR GVDPPQ E                       ESTEIPELVND IQ
Sbjct: 1   MTSSNPFFDDIRSRPGVDPPQTE-----------------------ESTEIPELVNDPIQ 37

Query: 250 TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGN 71
           T +KPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGN
Sbjct: 38  TVVKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGN 97

Query: 70  IRCLALEKVAASLELPCKYQGFG 2
           IRCLALEKVAASLELPCKYQGFG
Sbjct: 98  IRCLALEKVAASLELPCKYQGFG 120


>ref|XP_003546723.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Glycine max]
          Length = 304

 Score =  215 bits (548), Expect = 3e-54
 Identities = 106/143 (74%), Positives = 112/143 (78%)
 Frame = -3

Query: 430 MASGNPFFDDIRSRSGVDPPQIEXXXXXXXXXXXXXXXXXXPPQIEESTEIPELVNDHIQ 251
           MAS N FFDDIRS+  VDPPQ +                       EST++ ELVND  Q
Sbjct: 1   MASSNLFFDDIRSKVDVDPPQND-----------------------ESTDVGELVNDPAQ 37

Query: 250 TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGN 71
           TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHT+CSGCKPRVH+RCPTCRHELGN
Sbjct: 38  TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97

Query: 70  IRCLALEKVAASLELPCKYQGFG 2
           IRCLALEKVAASLELPCKYQGFG
Sbjct: 98  IRCLALEKVAASLELPCKYQGFG 120


>ref|XP_003542831.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Glycine max]
          Length = 304

 Score =  215 bits (548), Expect = 3e-54
 Identities = 106/143 (74%), Positives = 112/143 (78%)
 Frame = -3

Query: 430 MASGNPFFDDIRSRSGVDPPQIEXXXXXXXXXXXXXXXXXXPPQIEESTEIPELVNDHIQ 251
           MAS N FFDDIRS+  VDPPQ E                       EST++ EL+ND  Q
Sbjct: 1   MASSNLFFDDIRSKVDVDPPQNE-----------------------ESTDVGELLNDPAQ 37

Query: 250 TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGN 71
           TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHT+CSGCKPRVH+RCPTCRHELGN
Sbjct: 38  TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97

Query: 70  IRCLALEKVAASLELPCKYQGFG 2
           IRCLALEKVAASLELPCKYQGFG
Sbjct: 98  IRCLALEKVAASLELPCKYQGFG 120


>emb|CCG06553.1| E3 ubiquitin ligase-like protein [Lotus japonicus]
          Length = 304

 Score =  211 bits (538), Expect = 4e-53
 Identities = 104/143 (72%), Positives = 109/143 (76%)
 Frame = -3

Query: 430 MASGNPFFDDIRSRSGVDPPQIEXXXXXXXXXXXXXXXXXXPPQIEESTEIPELVNDHIQ 251
           MAS NP FDDIRS++ VDPPQ E                       E T + ELVND  Q
Sbjct: 1   MASSNPLFDDIRSKADVDPPQNE-----------------------ELTGVIELVNDTAQ 37

Query: 250 TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGN 71
             LKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHT+CSGCKPRVH+RCPTCRHELGN
Sbjct: 38  ATLKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97

Query: 70  IRCLALEKVAASLELPCKYQGFG 2
           IRCLALEKVAASLELPCKYQGFG
Sbjct: 98  IRCLALEKVAASLELPCKYQGFG 120


>ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
           gi|147807603|emb|CAN68850.1| hypothetical protein
           VITISV_003067 [Vitis vinifera]
           gi|297742680|emb|CBI35133.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score =  204 bits (518), Expect = 9e-51
 Identities = 101/143 (70%), Positives = 107/143 (74%)
 Frame = -3

Query: 430 MASGNPFFDDIRSRSGVDPPQIEXXXXXXXXXXXXXXXXXXPPQIEESTEIPELVNDHIQ 251
           MASGN +FDD+RS+S V                        PPQ E+  E+ E VND  Q
Sbjct: 1   MASGNTYFDDMRSKSEV----------------------IDPPQSEDMMEVSEHVNDPAQ 38

Query: 250 TALKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGN 71
           T LKPN TVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVH+RCPTCRHELGN
Sbjct: 39  TTLKPNVTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGN 98

Query: 70  IRCLALEKVAASLELPCKYQGFG 2
           IRCLALEKVAASLELPCKYQ FG
Sbjct: 99  IRCLALEKVAASLELPCKYQSFG 121


Top