BLASTX nr result

ID: Glycyrrhiza23_contig00021386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021386
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein ...   426   e-117
gb|AFK38781.1| unknown [Lotus japonicus]                              424   e-117
ref|NP_001242859.1| uncharacterized protein LOC100783349 [Glycin...   350   7e-97
ref|XP_003530943.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   342   3e-95
ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   352   6e-95

>ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula]
           gi|355525088|gb|AET05542.1| Pre-mRNA-splicing factor
           SPF27-like protein [Medicago truncatula]
           gi|388502546|gb|AFK39339.1| unknown [Medicago
           truncatula]
          Length = 261

 Score =  426 bits (1096), Expect = e-117
 Identities = 209/252 (82%), Positives = 221/252 (87%)
 Frame = -1

Query: 794 SMGDRSNGEVLMLEAPPSYAGSSSSNAEIIDALPYIDDDYGDPRVKLEVDRLVEDEMRRS 615
           S    SNG+VLMLEAPPSY  SS S+AEIIDALPYIDDDY DPRVK+EVDRLVE+EMRRS
Sbjct: 9   SSNSNSNGDVLMLEAPPSYGRSSHSDAEIIDALPYIDDDYSDPRVKIEVDRLVEEEMRRS 68

Query: 614 SKKPTDFLKDFPPLPNSNFQGYPMIAREYERVRAGRSPVPLDRSRYELEIPPVNKRTDET 435
           SKKP DFLKDFPPLP+SNF  YPMI REYERVRAGR PV LDRSRYELE PPVNKR DET
Sbjct: 69  SKKPADFLKDFPPLPSSNFHDYPMIGREYERVRAGRPPVSLDRSRYELEAPPVNKRNDET 128

Query: 434 AWKXXXXXXXXXXQYQTMRMENLDLLLKYGPDAWKQHNQRLEVYLSRMQKLAQEQNEKIE 255
           AWK          QYQT+RMENLDLL K+GPDAWKQHNQRLEVYLSRMQKLAQEQN+KIE
Sbjct: 129 AWKLAIQRAQRLLQYQTIRMENLDLLFKHGPDAWKQHNQRLEVYLSRMQKLAQEQNDKIE 188

Query: 254 KVNRERKYHQQNTAYELNALSMQWKDLCQKNIDIRAACASVETRINELKREAAERGWNLD 75
           KVNRERKYHQQNTAYELNALSMQW +LCQKNIDI+  CASVET +NEL+REAAERGWNLD
Sbjct: 189 KVNRERKYHQQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAERGWNLD 248

Query: 74  AITENGQLANSE 39
           AITENGQLANSE
Sbjct: 249 AITENGQLANSE 260


>gb|AFK38781.1| unknown [Lotus japonicus]
          Length = 248

 Score =  424 bits (1091), Expect = e-117
 Identities = 211/246 (85%), Positives = 220/246 (89%), Gaps = 1/246 (0%)
 Frame = -1

Query: 773 GEVLMLEAPPSYAG-SSSSNAEIIDALPYIDDDYGDPRVKLEVDRLVEDEMRRSSKKPTD 597
           GEVLMLEAPPSY G   SS+AEIIDALPYIDDDYGDPRVK+EVDRLVEDEMRRSSKKP D
Sbjct: 2   GEVLMLEAPPSYGGLPRSSDAEIIDALPYIDDDYGDPRVKVEVDRLVEDEMRRSSKKPAD 61

Query: 596 FLKDFPPLPNSNFQGYPMIAREYERVRAGRSPVPLDRSRYELEIPPVNKRTDETAWKXXX 417
           FLKDFPPLP SN +GYPMIAREYERVRAGR PV +DRSRYELEIPP+NKR DETAWK   
Sbjct: 62  FLKDFPPLPTSNLEGYPMIAREYERVRAGRPPVSIDRSRYELEIPPLNKRNDETAWKHAL 121

Query: 416 XXXXXXXQYQTMRMENLDLLLKYGPDAWKQHNQRLEVYLSRMQKLAQEQNEKIEKVNRER 237
                  QYQ MRMEN++LLLKYGPDAWKQHN RLEVYL RMQKLAQEQNEKIEKVNRER
Sbjct: 122 QRAQRLLQYQMMRMENIELLLKYGPDAWKQHNHRLEVYLLRMQKLAQEQNEKIEKVNRER 181

Query: 236 KYHQQNTAYELNALSMQWKDLCQKNIDIRAACASVETRINELKREAAERGWNLDAITENG 57
           KYHQQNTAYELNALS QW +LCQKNIDI AACASVETRINELKREAAERGWNLDAI+ENG
Sbjct: 182 KYHQQNTAYELNALSTQWNELCQKNIDINAACASVETRINELKREAAERGWNLDAISENG 241

Query: 56  QLANSE 39
           QLANSE
Sbjct: 242 QLANSE 247


>ref|NP_001242859.1| uncharacterized protein LOC100783349 [Glycine max]
           gi|255642441|gb|ACU21484.1| unknown [Glycine max]
          Length = 221

 Score =  350 bits (898), Expect(2) = 7e-97
 Identities = 175/205 (85%), Positives = 179/205 (87%), Gaps = 1/205 (0%)
 Frame = -1

Query: 791 MGDRSNGEVLMLEAPPSYAGSSSSNAEIIDALPYIDDDYGDPRVKLEVDRLVEDEMRRSS 612
           M D SNG VLMLEAPPSY   + SNAEIIDALPYIDDDY DPRVKLEVDRLVEDEMRRS+
Sbjct: 1   MADGSNGGVLMLEAPPSYGRPTGSNAEIIDALPYIDDDYADPRVKLEVDRLVEDEMRRST 60

Query: 611 KKPTDFLKDFPPLPNSNFQ-GYPMIAREYERVRAGRSPVPLDRSRYELEIPPVNKRTDET 435
           KKPTDFLKDFPPLPNSNFQ  YPMIAREYERVRAGR PV LDRSRYELE+PP NKR DET
Sbjct: 61  KKPTDFLKDFPPLPNSNFQQNYPMIAREYERVRAGRPPVALDRSRYELEMPPANKRNDET 120

Query: 434 AWKXXXXXXXXXXQYQTMRMENLDLLLKYGPDAWKQHNQRLEVYLSRMQKLAQEQNEKIE 255
           AWK          QYQ MRMENLDL+LKYGPD WKQHNQRLEVYLSRMQKLAQEQNEKIE
Sbjct: 121 AWKQALHRAQHLLQYQIMRMENLDLMLKYGPDTWKQHNQRLEVYLSRMQKLAQEQNEKIE 180

Query: 254 KVNRERKYHQQNTAYELNALSMQWK 180
           KVNRERKYHQQNTAYELNALSMQWK
Sbjct: 181 KVNRERKYHQQNTAYELNALSMQWK 205



 Score = 30.8 bits (68), Expect(2) = 7e-97
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -3

Query: 183 EGSLSEKYRHQSCVCFS 133
           +G+LSE+Y HQ C+CFS
Sbjct: 205 KGALSEEYGHQCCLCFS 221


>ref|XP_003530943.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SPF27
           homolog [Glycine max]
          Length = 220

 Score =  342 bits (878), Expect(2) = 3e-95
 Identities = 169/203 (83%), Positives = 177/203 (87%)
 Frame = -1

Query: 791 MGDRSNGEVLMLEAPPSYAGSSSSNAEIIDALPYIDDDYGDPRVKLEVDRLVEDEMRRSS 612
           M D S+GE+LMLEAP SY  SS S+AEIIDALPYIDDDY DPRVKLEVDRLVEDEMRRS+
Sbjct: 1   MADGSSGEILMLEAPASYGRSSDSDAEIIDALPYIDDDYADPRVKLEVDRLVEDEMRRST 60

Query: 611 KKPTDFLKDFPPLPNSNFQGYPMIAREYERVRAGRSPVPLDRSRYELEIPPVNKRTDETA 432
           KKPTDFL DFPPLPNS FQ YPMIAREYERVRAGR PV LDRSRY+LE+PP NKR DETA
Sbjct: 61  KKPTDFLNDFPPLPNSIFQNYPMIAREYERVRAGRPPVALDRSRYDLEMPPPNKRNDETA 120

Query: 431 WKXXXXXXXXXXQYQTMRMENLDLLLKYGPDAWKQHNQRLEVYLSRMQKLAQEQNEKIEK 252
           WK          QYQ +RMENLDL+LKYGPD WKQHNQRLEVYLSRMQKLAQEQNEKIEK
Sbjct: 121 WKQALHRAQRLLQYQIIRMENLDLMLKYGPDTWKQHNQRLEVYLSRMQKLAQEQNEKIEK 180

Query: 251 VNRERKYHQQNTAYELNALSMQW 183
           VNRERKYHQQNTAYELNALSMQW
Sbjct: 181 VNRERKYHQQNTAYELNALSMQW 203



 Score = 33.1 bits (74), Expect(2) = 3e-95
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -3

Query: 180 GSLSEKYRHQSCVCFS 133
           G+LSE+YRHQ C+CFS
Sbjct: 205 GALSEEYRHQCCLCFS 220


>ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Vitis vinifera]
          Length = 256

 Score =  352 bits (903), Expect = 6e-95
 Identities = 172/247 (69%), Positives = 199/247 (80%)
 Frame = -1

Query: 779 SNGEVLMLEAPPSYAGSSSSNAEIIDALPYIDDDYGDPRVKLEVDRLVEDEMRRSSKKPT 600
           ++G++LMLEAPP     +S  AE IDALPYIDDDYG P+VK EVDRLVEDEMRRSSKKP+
Sbjct: 3   NDGDILMLEAPPQ----ASRPAEFIDALPYIDDDYGHPKVKEEVDRLVEDEMRRSSKKPS 58

Query: 599 DFLKDFPPLPNSNFQGYPMIAREYERVRAGRSPVPLDRSRYELEIPPVNKRTDETAWKXX 420
           DFLKD PPLP   F  +PM+AREYERVRAG+ PV LD SRY LE+PP+NKR DETAWK  
Sbjct: 59  DFLKDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAWKHA 118

Query: 419 XXXXXXXXQYQTMRMENLDLLLKYGPDAWKQHNQRLEVYLSRMQKLAQEQNEKIEKVNRE 240
                   Q+Q +R+ENL+L+ K+G D WKQHNQRLE YLSRMQ LA EQNEKIE VNRE
Sbjct: 119 LQKAQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETVNRE 178

Query: 239 RKYHQQNTAYELNALSMQWKDLCQKNIDIRAACASVETRINELKREAAERGWNLDAITEN 60
           RKYHQQNTA+ELNALS QWK+LC+KNI+IR ACA +E  I EL+REAAERGWNLDA  +N
Sbjct: 179 RKYHQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDANIDN 238

Query: 59  GQLANSE 39
           G L++SE
Sbjct: 239 GSLSHSE 245


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