BLASTX nr result

ID: Glycyrrhiza23_contig00021371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021371
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44686.1| unknown [Lotus japonicus]                              123   1e-26
ref|XP_003527522.1| PREDICTED: RING-H2 finger protein ATL52-like...    88   8e-16
ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like...    83   3e-14
ref|XP_004138996.1| PREDICTED: RING-H2 finger protein ATL51-like...    82   6e-14

>gb|AFK44686.1| unknown [Lotus japonicus]
          Length = 302

 Score =  123 bits (309), Expect = 1e-26
 Identities = 77/148 (52%), Positives = 93/148 (62%), Gaps = 11/148 (7%)
 Frame = +1

Query: 1   NESLRLLPKCNHAFHLPCIDPWLKSHSTCPLCRSNI------MEAPTSINISALEYQRRS 162
           NESLRLLPKCNHAFHLPCIDPWLKSHS+CPLCRSNI      MEAP S+ I+A E+Q R+
Sbjct: 161 NESLRLLPKCNHAFHLPCIDPWLKSHSSCPLCRSNIAPVITSMEAPASVTINASEHQLRN 220

Query: 163 DVVVTIIXXXXXXXXXXXXXXXXXXGVISLLGDEAVVPKLSVEE-EAREQLDYCTS---R 330
           + VV II                   V+   GD  VVPK+SVE+      +++C +   R
Sbjct: 221 NDVVVIIQSSELIRTQQQEV------VVDFGGD--VVPKVSVEDGHGGVNVEHCCNSQRR 272

Query: 331 SVYVADILNESESDTESQREVSD-IGSS 411
            V VADIL+E + D E Q+  SD IGSS
Sbjct: 273 RVSVADILSEGDDDIELQKVGSDIIGSS 300


>ref|XP_003527522.1| PREDICTED: RING-H2 finger protein ATL52-like [Glycine max]
          Length = 226

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 11/71 (15%)
 Frame = +1

Query: 1   NESLRLLPKCNHAFHLPCIDPWLKSHSTCPLCRSNI-----------MEAPTSINISALE 147
           NE+LRLLPKCNHAFHLPCID WLKSH+TCPLCRS++           ME P  + ++AL 
Sbjct: 146 NENLRLLPKCNHAFHLPCIDTWLKSHATCPLCRSSVTACPNPNPNSSMEPPPRVIVNALG 205

Query: 148 YQRRSDVVVTI 180
           +Q RS+ VV +
Sbjct: 206 HQLRSNHVVVV 216


>ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|222857605|gb|EEE95152.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 59/163 (36%), Positives = 75/163 (46%), Gaps = 37/163 (22%)
 Frame = +1

Query: 1   NESLRLLPKCNHAFHLPCIDPWLKSHSTCPLCRSNI-------MEAPT----------SI 129
           NESLRLLPKC+HAFHLPCID WLKSH++CPLCR+NI        EAP             
Sbjct: 149 NESLRLLPKCSHAFHLPCIDTWLKSHASCPLCRANIAPANILPSEAPAVPEPVQENLPRT 208

Query: 130 NISALEYQRRSDVVVTIIXXXXXXXXXXXXXXXXXXGVISL-LGDEAVVPKLSVEEE--- 297
           N+S L+YQ  ++  V +I                  GV+SL +GD+   PK  V ++   
Sbjct: 209 NVSTLQYQHGTNDAVLVI-------QDLEGSTFRQEGVVSLVIGDD--TPKTPVNQDLES 259

Query: 298 ----------------AREQLDYCTSRSVYVADILNESESDTE 378
                            R      +     +ADIL  SE D E
Sbjct: 260 SQTGTELQISDPIQPLRRSVSSSFSQNHTSIADILRTSEDDDE 302


>ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
           gi|449487632|ref|XP_004157723.1| PREDICTED: RING-H2
           finger protein ATL51-like [Cucumis sativus]
          Length = 382

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/76 (56%), Positives = 49/76 (64%), Gaps = 15/76 (19%)
 Frame = +1

Query: 1   NESLRLLPKCNHAFHLPCIDPWLKSHSTCPLCRSNI-----MEAPTS-------INISAL 144
           NESLRLLPKC+HAFHLPCID WLKSHSTCPLCRSNI        PT           SA 
Sbjct: 154 NESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSNISPTNLFSTPTQEIQTTQHFVSSAF 213

Query: 145 EYQ---RRSDVVVTII 183
           +YQ   R +D +V ++
Sbjct: 214 QYQHQHRTNDTIVVVV 229


>ref|XP_004138996.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
           gi|449517886|ref|XP_004165975.1| PREDICTED: RING-H2
           finger protein ATL51-like [Cucumis sativus]
          Length = 365

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   NESLRLLPKCNHAFHLPCIDPWLKSHSTCPLCRSNIMEA-PTSINISALEYQRRSDVVVT 177
           NESLRLLPKC+HAFHL CID WLKS S+CPLCR NI    P   +++AL Y+  SD  V 
Sbjct: 155 NESLRLLPKCSHAFHLACIDTWLKSSSSCPLCRCNIASTNPPPPSVTALGYRHSSDAAVV 214

Query: 178 II 183
           +I
Sbjct: 215 VI 216


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