BLASTX nr result

ID: Glycyrrhiza23_contig00021369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021369
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like...   108   3e-22
ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi...    90   2e-16
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...    84   1e-14
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    72   6e-11
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]    72   6e-11

>ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
          Length = 522

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/73 (72%), Positives = 58/73 (79%)
 Frame = +2

Query: 221 PSEQPPYFLSEPINQPFPPPTTVRSDSFNFNDKALRVSPSXXXXXXXXXXVFFISGLLHL 400
           P EQPPYFLSEP N PFPP TTVRSDSF+ ND+AL+VSPS          VFFISGLLHL
Sbjct: 5   PPEQPPYFLSEP-NPPFPPTTTVRSDSFSLNDRALKVSPSILLIIIILAIVFFISGLLHL 63

Query: 401 LVRFLWRPQSRDP 439
           LVRFLWRPQ+R+P
Sbjct: 64  LVRFLWRPQTREP 76


>ref|XP_003610233.1| RING finger protein [Medicago truncatula]
           gi|355511288|gb|AES92430.1| RING finger protein
           [Medicago truncatula]
          Length = 511

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 8/96 (8%)
 Frame = +2

Query: 176 MGRSFLQGKGD-TFLPPS--EQPPYFLSEPINQPFPPPT--TVRSDS---FNFNDKALRV 331
           MGRSF   +GD TF+ PS  EQPPY+     + PFPP T  T+RS++   F+FN+  L+V
Sbjct: 1   MGRSFEPFQGDNTFMIPSPLEQPPYYFQP--HPPFPPITVSTLRSNNNSNFSFNNSTLKV 58

Query: 332 SPSXXXXXXXXXXVFFISGLLHLLVRFLWRPQSRDP 439
           SP           VFFISGLLHLLVRFLWRPQSRDP
Sbjct: 59  SPGILIIITILAIVFFISGLLHLLVRFLWRPQSRDP 94


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/62 (67%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = +2

Query: 257 INQPFPP-PTTVRSDSFNFNDKALRVSPSXXXXXXXXXXVFFISGLLHLLVRFLWRPQSR 433
           I +P PP P TVRSDSF+FND+AL+VSPS          VFFISGLLHLLVRFLWRPQ+R
Sbjct: 23  IPRPTPPFPPTVRSDSFSFNDRALKVSPSILLIIIILAIVFFISGLLHLLVRFLWRPQTR 82

Query: 434 DP 439
           +P
Sbjct: 83  EP 84


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/91 (48%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
 Frame = +2

Query: 188 FLQGKGDTFLPPSEQPPYFLSEPINQPFPPPTTVR-------SDSFNFNDKALRVSPSXX 346
           FLQ K +T+L PS+QP YFLS+P      PP           SD FN N K   +SPS  
Sbjct: 5   FLQSKENTYLSPSQQP-YFLSQP------PPQQQNNNLDGSSSDGFNLNSK---ISPSVL 54

Query: 347 XXXXXXXXVFFISGLLHLLVRFLWRPQSRDP 439
                   +FF+SGLLHLLVRFL RP +RDP
Sbjct: 55  LIIIILAIIFFVSGLLHLLVRFLLRPPNRDP 85


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/103 (40%), Positives = 54/103 (52%)
 Frame = +2

Query: 131 KVAIFREFFSL*LDNMGRSFLQGKGDTFLPPSEQPPYFLSEPINQPFPPPTTVRSDSFNF 310
           KVA+   F  L  +NM     Q +   F  PSE P +     ++QP PPP   +S  +N 
Sbjct: 31  KVAVLVSFLHLSFENMDSVLFQIQEKAFNSPSESPAF-----LSQPPPPPANFQSGDYNL 85

Query: 311 NDKALRVSPSXXXXXXXXXXVFFISGLLHLLVRFLWRPQSRDP 439
           N K   VSPS          +FF+SGLLHLLVRFL R  +R+P
Sbjct: 86  NSK---VSPSILLIIIILAIIFFVSGLLHLLVRFLLRQPNREP 125


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