BLASTX nr result

ID: Glycyrrhiza23_contig00021352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021352
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   617   e-174
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   578   e-163
ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   448   e-123
ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   448   e-123
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...   446   e-123

>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  617 bits (1592), Expect = e-174
 Identities = 311/371 (83%), Positives = 327/371 (88%)
 Frame = +2

Query: 2    LHHAEQNKDFSTELIRKIEEXXXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRK 181
            LHHAEQNKDFSTELIRKIEE                RFRSISSLKYQIQT LDQLEASRK
Sbjct: 954  LHHAEQNKDFSTELIRKIEEAISGTSNNSKSSRVTARFRSISSLKYQIQTALDQLEASRK 1013

Query: 182  VLLDRLLEIDHTMEKPKDEDIERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKN 361
            +LLDRLLEID TMEKPK+EDIERVGKCRNCQPNCDGPPC+LCELDELFQDYEARLFVLKN
Sbjct: 1014 MLLDRLLEIDQTMEKPKEEDIERVGKCRNCQPNCDGPPCILCELDELFQDYEARLFVLKN 1073

Query: 362  ERGGIISSAEEAVDFQKKSFALNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVSRS 541
            ERGGIISSAEEAVDFQKK+FALNHFL             DIGHEESKKRNVGQRVVVS+S
Sbjct: 1074 ERGGIISSAEEAVDFQKKNFALNHFLSKLSQSNHSSTVSDIGHEESKKRNVGQRVVVSKS 1133

Query: 542  ASELELILGVIKNYCKARLGRDSFSAATKHLHIFEGMRKEFVHARSLALAQAQYLRAHDE 721
            ASELELILGV+KNYCK+RLGRDS SAATKHLH+FEGMRKEF HARSLALAQA YLRAHDE
Sbjct: 1134 ASELELILGVLKNYCKSRLGRDSVSAATKHLHVFEGMRKEFGHARSLALAQAMYLRAHDE 1193

Query: 722  IKMAVSRLHLRANEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYLKGLVQ 901
            IKMAVSRLHLRANEDDKSLDALGENEL+AASSNFSHDKFMS  +LSQIKGKLRYLKGLVQ
Sbjct: 1194 IKMAVSRLHLRANEDDKSLDALGENELAAASSNFSHDKFMSLTMLSQIKGKLRYLKGLVQ 1253

Query: 902  SKQKLPLESPDSSSFTQETTAMSNSTEEKGVLISKTDEETCPVCQEKLGNQRMVFQCGHV 1081
            SKQKL  ESP SSSFT+ETTA  NSTEEK  L+SK+D+ETCP+CQEKLG Q+MVFQCGHV
Sbjct: 1254 SKQKLQFESPTSSSFTRETTATPNSTEEKDALLSKSDDETCPICQEKLGKQKMVFQCGHV 1313

Query: 1082 TCCKCLFAMTE 1114
            TCCKCLFAMTE
Sbjct: 1314 TCCKCLFAMTE 1324


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
            gi|355516770|gb|AES98393.1| ATP-dependent helicase,
            putative [Medicago truncatula]
          Length = 1764

 Score =  578 bits (1491), Expect = e-163
 Identities = 297/371 (80%), Positives = 316/371 (85%)
 Frame = +2

Query: 2    LHHAEQNKDFSTELIRKIEEXXXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRK 181
            LHHAE++KDFSTELIRKIEE                RFRSISSL Y+IQTGLDQL ASRK
Sbjct: 1079 LHHAEKDKDFSTELIRKIEESISGNSNNSKSSRLAARFRSISSLTYEIQTGLDQLVASRK 1138

Query: 182  VLLDRLLEIDHTMEKPKDEDIERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKN 361
            V+LDRLLEID TME PKDEDIERVGKCRNCQPNCDGPPCVLCELDELFQ YEARLFVLKN
Sbjct: 1139 VVLDRLLEIDQTMENPKDEDIERVGKCRNCQPNCDGPPCVLCELDELFQHYEARLFVLKN 1198

Query: 362  ERGGIISSAEEAVDFQKKSFALNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVSRS 541
            ERG IISSAEEAVDFQKKSFA NHFL             DI +EES+KRNVGQ+VV SRS
Sbjct: 1199 ERGDIISSAEEAVDFQKKSFARNHFLSNLSQSNQSSSVSDIDNEESRKRNVGQKVVTSRS 1258

Query: 542  ASELELILGVIKNYCKARLGRDSFSAATKHLHIFEGMRKEFVHARSLALAQAQYLRAHDE 721
            AS LE++LGVIKNYCK R G+DS SAATKHLHI EGMRKEFV+ARSLA AQAQYLRAHDE
Sbjct: 1259 ASILEVLLGVIKNYCKTRFGKDSASAATKHLHILEGMRKEFVYARSLASAQAQYLRAHDE 1318

Query: 722  IKMAVSRLHLRANEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYLKGLVQ 901
            IKMAVSRLHLR NEDDKSLDALGENEL AASSNFS +KFMS ALLSQIKGKLRYLKGLVQ
Sbjct: 1319 IKMAVSRLHLRENEDDKSLDALGENELYAASSNFSQEKFMSLALLSQIKGKLRYLKGLVQ 1378

Query: 902  SKQKLPLESPDSSSFTQETTAMSNSTEEKGVLISKTDEETCPVCQEKLGNQRMVFQCGHV 1081
            SKQKLP ESPD+SS TQ+T +MSNSTEEKG LI KT EE+CP+CQEKLG++RMVFQCGHV
Sbjct: 1379 SKQKLPSESPDNSSCTQDTNSMSNSTEEKGELIPKTYEESCPICQEKLGHKRMVFQCGHV 1438

Query: 1082 TCCKCLFAMTE 1114
            TCCKCL AMTE
Sbjct: 1439 TCCKCLVAMTE 1449


>ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            SHPRH-like [Cucumis sativus]
          Length = 1520

 Score =  448 bits (1152), Expect = e-123
 Identities = 229/372 (61%), Positives = 277/372 (74%), Gaps = 1/372 (0%)
 Frame = +2

Query: 2    LHHAEQNKDFSTELIRKIEEXXXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRK 181
            +HHAEQNKDFS ELIRKIEE                RFRSIS+LKY +Q+GLD LEASRK
Sbjct: 1036 VHHAEQNKDFSHELIRKIEEAVSGNLNNSKSRVGS-RFRSISALKYHVQSGLDLLEASRK 1094

Query: 182  VLLDRLLEIDHTMEKPKDEDIERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKN 361
            V+LDRLLEID TM+ PK+EDIERV  CR CQ + +GPPCVLCELDELFQ+YEARLF L  
Sbjct: 1095 VVLDRLLEIDQTMKSPKEEDIERVRYCRICQADSNGPPCVLCELDELFQEYEARLFRLNK 1154

Query: 362  ERGGIISSAEEAVDFQKKSFALNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVSRS 541
             +GG+++S EEAV+ QKK  ALN F               +GHEE  KR+ G++V+VS+ 
Sbjct: 1155 VQGGMVTSVEEAVEAQKKKSALNRFYWSLLQQNKNSSSSKVGHEEPNKRDAGEKVMVSKH 1214

Query: 542  ASELELILGVIKNYCKARLGRDSFSAATKHLHIFEGMRKEFVHARSLALAQAQYLRAHDE 721
             SELE++LGVIKN+CK +LG++S +AA K LH+ E MRKE+ HARSLA+AQAQ L AHDE
Sbjct: 1215 PSELEVVLGVIKNFCKTQLGKESIAAANKQLHLLEHMRKEYGHARSLAIAQAQVLNAHDE 1274

Query: 722  IKMAVSRLHLRA-NEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYLKGLV 898
            IKMA +RL LR  ++DD S   + E+EL AAS  +S DKFMS A+LS++KGKLRYLKGLV
Sbjct: 1275 IKMATTRLSLRGDDDDDSSAFTISEHELPAASVQYSSDKFMSLAMLSRVKGKLRYLKGLV 1334

Query: 899  QSKQKLPLESPDSSSFTQETTAMSNSTEEKGVLISKTDEETCPVCQEKLGNQRMVFQCGH 1078
            QSKQ +PL+S    + TQE    S +TE+K    SK DEE+CPVCQEKL NQ+MVFQCGH
Sbjct: 1335 QSKQTIPLDSSSDLALTQEPAITSTATEQKNENTSKADEESCPVCQEKLNNQKMVFQCGH 1394

Query: 1079 VTCCKCLFAMTE 1114
            +TCCKCLFAMTE
Sbjct: 1395 ITCCKCLFAMTE 1406


>ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Cucumis sativus]
          Length = 1520

 Score =  448 bits (1152), Expect = e-123
 Identities = 229/372 (61%), Positives = 277/372 (74%), Gaps = 1/372 (0%)
 Frame = +2

Query: 2    LHHAEQNKDFSTELIRKIEEXXXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRK 181
            +HHAEQNKDFS ELIRKIEE                RFRSIS+LKY +Q+GLD LEASRK
Sbjct: 1036 VHHAEQNKDFSHELIRKIEEAVSGNLNNSKSRVGS-RFRSISALKYHVQSGLDLLEASRK 1094

Query: 182  VLLDRLLEIDHTMEKPKDEDIERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKN 361
            V+LDRLLEID TM+ PK+EDIERV  CR CQ + +GPPCVLCELDELFQ+YEARLF L  
Sbjct: 1095 VVLDRLLEIDQTMKSPKEEDIERVRYCRICQADSNGPPCVLCELDELFQEYEARLFRLNK 1154

Query: 362  ERGGIISSAEEAVDFQKKSFALNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVSRS 541
             +GG+++S EEAV+ QKK  ALN F               +GHEE  KR+ G++V+VS+ 
Sbjct: 1155 VQGGMVTSVEEAVEAQKKKSALNRFYWSLLQQNKNSSSSKVGHEEPNKRDAGEKVMVSKH 1214

Query: 542  ASELELILGVIKNYCKARLGRDSFSAATKHLHIFEGMRKEFVHARSLALAQAQYLRAHDE 721
             SELE++LGVIKN+CK +LG++S +AA K LH+ E MRKE+ HARSLA+AQAQ L AHDE
Sbjct: 1215 PSELEVVLGVIKNFCKTQLGKESIAAANKQLHLLEHMRKEYGHARSLAIAQAQVLNAHDE 1274

Query: 722  IKMAVSRLHLRA-NEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYLKGLV 898
            IKMA +RL LR  ++DD S   + E+EL AAS  +S DKFMS A+LS++KGKLRYLKGLV
Sbjct: 1275 IKMATTRLSLRGDDDDDSSAFTISEHELPAASVQYSSDKFMSLAMLSRVKGKLRYLKGLV 1334

Query: 899  QSKQKLPLESPDSSSFTQETTAMSNSTEEKGVLISKTDEETCPVCQEKLGNQRMVFQCGH 1078
            QSKQ +PL+S    + TQE    S +TE+K    SK DEE+CPVCQEKL NQ+MVFQCGH
Sbjct: 1335 QSKQTIPLDSSSDLALTQEPAITSTATEQKNENTSKADEESCPVCQEKLNNQKMVFQCGH 1394

Query: 1079 VTCCKCLFAMTE 1114
            +TCCKCLFAMTE
Sbjct: 1395 ITCCKCLFAMTE 1406


>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
            gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
            helicase, putative [Ricinus communis]
          Length = 1588

 Score =  446 bits (1146), Expect = e-123
 Identities = 235/371 (63%), Positives = 273/371 (73%)
 Frame = +2

Query: 2    LHHAEQNKDFSTELIRKIEEXXXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRK 181
            L+HAE NKDF  +LI+KIEE                +FRSI++LKY IQT LDQLEASRK
Sbjct: 950  LYHAELNKDFKRDLIKKIEEAVSGTLNNSRSSRIASQFRSIAALKYHIQTRLDQLEASRK 1009

Query: 182  VLLDRLLEIDHTMEKPKDEDIERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKN 361
             LLDRLLEID TM +PK+ DIERV  CR CQ   DGP C+ CELDELFQDYEARLF L  
Sbjct: 1010 TLLDRLLEIDLTMGQPKEADIERVRFCRICQAVDDGPICLHCELDELFQDYEARLFRLNK 1069

Query: 362  ERGGIISSAEEAVDFQKKSFALNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVSRS 541
             RG II+SAEEAVD QKK+ ALN F              D  ++ SK+R+ G+RVVVS+S
Sbjct: 1070 LRGDIITSAEEAVDLQKKNSALNRFYWNLSGTNRSSTSSDDANDASKRRDAGERVVVSKS 1129

Query: 542  ASELELILGVIKNYCKARLGRDSFSAATKHLHIFEGMRKEFVHARSLALAQAQYLRAHDE 721
             SELE++LGV+K+YCK +LG++  SAA+K LHI EGMRKE+ HARSLA+AQAQ L AHDE
Sbjct: 1130 PSELEVVLGVVKSYCKIQLGKEGISAASKQLHILEGMRKEYSHARSLAVAQAQILHAHDE 1189

Query: 722  IKMAVSRLHLRANEDDKSLDALGENELSAASSNFSHDKFMSEALLSQIKGKLRYLKGLVQ 901
            IKMA SRLHLR NEDD SLDALG NEL +AS   S +KF+S  LLS+IKG+LRYLKGLV 
Sbjct: 1190 IKMATSRLHLRENEDDNSLDALGPNELESASVLQSSEKFISLTLLSRIKGRLRYLKGLVL 1249

Query: 902  SKQKLPLESPDSSSFTQETTAMSNSTEEKGVLISKTDEETCPVCQEKLGNQRMVFQCGHV 1081
            SKQK P ES  +SS TQE   MS S E+    + K DEE CP+CQEK+ NQ+MVFQCGHV
Sbjct: 1250 SKQKPPPESSSNSSLTQEMATMSTSEEKMSDDLPKDDEEACPICQEKMHNQKMVFQCGHV 1309

Query: 1082 TCCKCLFAMTE 1114
            TCCKCLFAMTE
Sbjct: 1310 TCCKCLFAMTE 1320


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