BLASTX nr result

ID: Glycyrrhiza23_contig00021336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021336
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   119   3e-25
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   110   9e-23
ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...   100   1e-19
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...    96   4e-18
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...    74   2e-11

>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
            truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
            dehydrogenase, lipoyl-binding site [Medicago truncatula]
            gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II
            transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/74 (79%), Positives = 63/74 (85%)
 Frame = +1

Query: 1    LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTAASGKSKQQ 180
            LPPSTRCSFSCQPPSV+ +SLA LQ NI NS  NS S+   QR+PVP SRTAASGKSKQQ
Sbjct: 2151 LPPSTRCSFSCQPPSVANSSLASLQSNIKNSGSNSGSLATSQRSPVPLSRTAASGKSKQQ 2210

Query: 181  DNDFEVDPWTLLED 222
            DNDFEVDPWTLLED
Sbjct: 2211 DNDFEVDPWTLLED 2224


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/74 (70%), Positives = 57/74 (77%)
 Frame = +1

Query: 1    LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTAASGKSKQQ 180
            LPPS RCSFSCQ P+V  ++L  LQPN TNS FNS S  +PQRN VP SRT  SGKSKQ 
Sbjct: 2157 LPPSIRCSFSCQLPTVPASALVSLQPNTTNSGFNSGSSTVPQRNLVPSSRTTTSGKSKQH 2216

Query: 181  DNDFEVDPWTLLED 222
            DND +VDPWTLLED
Sbjct: 2217 DNDLDVDPWTLLED 2230


>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score =  100 bits (250), Expect = 1e-19
 Identities = 54/76 (71%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +1

Query: 1    LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA--ASGKSK 174
            L PS RCS SCQPPS+S ++L  LQP+ITN   NSSS  IPQRNPV  SR A  ASGKSK
Sbjct: 2112 LIPSMRCSLSCQPPSISNSALVCLQPSITNPGSNSSSSTIPQRNPV-LSRVASNASGKSK 2170

Query: 175  QQDNDFEVDPWTLLED 222
            QQDND E+DPWTLLED
Sbjct: 2171 QQDNDLEIDPWTLLED 2186


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/76 (69%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
 Frame = +1

Query: 1    LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA--ASGKSK 174
            L PS RCS SCQPPSVS ++L  LQP+ITN   NSSS  IPQRN V  SR A  ASGKSK
Sbjct: 2117 LIPSMRCSLSCQPPSVSNSALVCLQPSITNPGSNSSSSTIPQRNSV-LSRVASNASGKSK 2175

Query: 175  QQDNDFEVDPWTLLED 222
             QDND E+DPWTLLED
Sbjct: 2176 LQDNDLEIDPWTLLED 2191


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
 Frame = +1

Query: 1    LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTAASGKSK-- 174
            L PS RCS SCQPPSVS  ++A LQP+++   F+  + N  QRN    S     GK K  
Sbjct: 2149 LVPSGRCSISCQPPSVSSAAVASLQPSLSFPAFHPGNTNQSQRN---SSSLVRPGKLKNM 2205

Query: 175  --QQDNDFEVDPWTLLED 222
              QQD+D E+DPWTLLED
Sbjct: 2206 PLQQDHDIEIDPWTLLED 2223


Top