BLASTX nr result
ID: Glycyrrhiza23_contig00021336
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00021336 (224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003623963.1| Mediator of RNA polymerase II transcription ... 119 3e-25 ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806... 110 9e-23 ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782... 100 1e-19 ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781... 96 4e-18 ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263... 74 2e-11 >ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid dehydrogenase, lipoyl-binding site [Medicago truncatula] gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] Length = 2270 Score = 119 bits (298), Expect = 3e-25 Identities = 59/74 (79%), Positives = 63/74 (85%) Frame = +1 Query: 1 LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTAASGKSKQQ 180 LPPSTRCSFSCQPPSV+ +SLA LQ NI NS NS S+ QR+PVP SRTAASGKSKQQ Sbjct: 2151 LPPSTRCSFSCQPPSVANSSLASLQSNIKNSGSNSGSLATSQRSPVPLSRTAASGKSKQQ 2210 Query: 181 DNDFEVDPWTLLED 222 DNDFEVDPWTLLED Sbjct: 2211 DNDFEVDPWTLLED 2224 >ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max] Length = 2279 Score = 110 bits (276), Expect = 9e-23 Identities = 52/74 (70%), Positives = 57/74 (77%) Frame = +1 Query: 1 LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTAASGKSKQQ 180 LPPS RCSFSCQ P+V ++L LQPN TNS FNS S +PQRN VP SRT SGKSKQ Sbjct: 2157 LPPSIRCSFSCQLPTVPASALVSLQPNTTNSGFNSGSSTVPQRNLVPSSRTTTSGKSKQH 2216 Query: 181 DNDFEVDPWTLLED 222 DND +VDPWTLLED Sbjct: 2217 DNDLDVDPWTLLED 2230 >ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max] Length = 2235 Score = 100 bits (250), Expect = 1e-19 Identities = 54/76 (71%), Positives = 59/76 (77%), Gaps = 2/76 (2%) Frame = +1 Query: 1 LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA--ASGKSK 174 L PS RCS SCQPPS+S ++L LQP+ITN NSSS IPQRNPV SR A ASGKSK Sbjct: 2112 LIPSMRCSLSCQPPSISNSALVCLQPSITNPGSNSSSSTIPQRNPV-LSRVASNASGKSK 2170 Query: 175 QQDNDFEVDPWTLLED 222 QQDND E+DPWTLLED Sbjct: 2171 QQDNDLEIDPWTLLED 2186 >ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max] Length = 2240 Score = 95.5 bits (236), Expect = 4e-18 Identities = 53/76 (69%), Positives = 57/76 (75%), Gaps = 2/76 (2%) Frame = +1 Query: 1 LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA--ASGKSK 174 L PS RCS SCQPPSVS ++L LQP+ITN NSSS IPQRN V SR A ASGKSK Sbjct: 2117 LIPSMRCSLSCQPPSVSNSALVCLQPSITNPGSNSSSSTIPQRNSV-LSRVASNASGKSK 2175 Query: 175 QQDNDFEVDPWTLLED 222 QDND E+DPWTLLED Sbjct: 2176 LQDNDLEIDPWTLLED 2191 >ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera] Length = 2272 Score = 73.6 bits (179), Expect = 2e-11 Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 4/78 (5%) Frame = +1 Query: 1 LPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTAASGKSK-- 174 L PS RCS SCQPPSVS ++A LQP+++ F+ + N QRN S GK K Sbjct: 2149 LVPSGRCSISCQPPSVSSAAVASLQPSLSFPAFHPGNTNQSQRN---SSSLVRPGKLKNM 2205 Query: 175 --QQDNDFEVDPWTLLED 222 QQD+D E+DPWTLLED Sbjct: 2206 PLQQDHDIEIDPWTLLED 2223