BLASTX nr result

ID: Glycyrrhiza23_contig00021303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021303
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36559.1| unknown [Lotus japonicus]                              104   8e-21
ref|NP_001239633.1| uncharacterized protein LOC100787459 [Glycin...    88   6e-16
ref|XP_003552261.1| PREDICTED: chlorophyll synthase, chloroplast...    84   1e-14
ref|XP_003547859.1| PREDICTED: chlorophyll synthase, chloroplast...    78   8e-13
gb|AEI83422.1| chlorophyll synthase [Camellia sinensis]                63   3e-08

>gb|AFK36559.1| unknown [Lotus japonicus]
          Length = 219

 Score =  104 bits (259), Expect = 8e-21
 Identities = 55/70 (78%), Positives = 61/70 (87%)
 Frame = +1

Query: 31  MASLVNMVSVSPRVLSPXXXXXXXSLQARPVLAPFSVSLTRRRLTIRAAETDANEVKSEA 210
           MASLVNMVSVSPR+LSP       S+Q+RPVL+PFS S TRRRLT+RAAETDANEVKS+A
Sbjct: 1   MASLVNMVSVSPRILSPTTTRAP-SVQSRPVLSPFSDSFTRRRLTVRAAETDANEVKSQA 59

Query: 211 PDKAPAKNGS 240
           PDKAPAKNGS
Sbjct: 60  PDKAPAKNGS 69


>ref|NP_001239633.1| uncharacterized protein LOC100787459 [Glycine max]
           gi|255647387|gb|ACU24159.1| unknown [Glycine max]
          Length = 377

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/70 (67%), Positives = 55/70 (78%)
 Frame = +1

Query: 31  MASLVNMVSVSPRVLSPXXXXXXXSLQARPVLAPFSVSLTRRRLTIRAAETDANEVKSEA 210
           MASL+NMVSV PR+ SP       SLQARPVL PFSVS +RRRL+IRA ETD NEV+S+A
Sbjct: 1   MASLLNMVSVPPRI-SPTSHTRIASLQARPVLPPFSVSFSRRRLSIRATETDTNEVQSQA 59

Query: 211 PDKAPAKNGS 240
           P  AP+K+GS
Sbjct: 60  PGAAPSKDGS 69


>ref|XP_003552261.1| PREDICTED: chlorophyll synthase, chloroplastic-like [Glycine max]
          Length = 377

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/70 (64%), Positives = 54/70 (77%)
 Frame = +1

Query: 31  MASLVNMVSVSPRVLSPXXXXXXXSLQARPVLAPFSVSLTRRRLTIRAAETDANEVKSEA 210
           MASL+NMVSV  R+ SP       SLQ+RPVL PFSVS +RRRL+IRA ETD NEV+S+A
Sbjct: 1   MASLLNMVSVPSRI-SPSSHTRTTSLQSRPVLPPFSVSFSRRRLSIRATETDTNEVQSQA 59

Query: 211 PDKAPAKNGS 240
           P  AP+K+GS
Sbjct: 60  PGTAPSKDGS 69


>ref|XP_003547859.1| PREDICTED: chlorophyll synthase, chloroplastic-like isoform 1
           [Glycine max]
          Length = 378

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = +1

Query: 31  MASLVNMVSVSPRVLSPXXXXXXXSLQARPVLAPFSVSLTRRRLTIRAAETDANE-VKSE 207
           MASL+NMVSV PR+ SP       SLQARPVL  FSVS +RRR +IRA ETD NE ++S+
Sbjct: 1   MASLLNMVSVPPRI-SPTSHTRITSLQARPVLPAFSVSFSRRRQSIRATETDTNEAIQSQ 59

Query: 208 APDKAPAKNGS 240
           AP  AP+K+GS
Sbjct: 60  APGAAPSKDGS 70


>gb|AEI83422.1| chlorophyll synthase [Camellia sinensis]
          Length = 374

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +1

Query: 31  MASLVNMVSVSPRVLSPXXXXXXXSLQARPVLAPFSVSLTRRRLTIRAAETDANE-VKSE 207
           MASL+N VS S R+ +         L+ R V  P S+SLTRRRLT+RA ETDANE +K+E
Sbjct: 1   MASLLNTVS-SIRLSNAKTNR----LRTRTVPPPISLSLTRRRLTVRATETDANEAIKAE 55

Query: 208 APDKAPAKNGS 240
           APDKAP  +GS
Sbjct: 56  APDKAPVASGS 66


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