BLASTX nr result

ID: Glycyrrhiza23_contig00021301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021301
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610624.1| Histone deacetylase [Medicago truncatula] gi...   248   2e-63
ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus ...   230   4e-58
ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|1...   227   3e-57
emb|CBI22472.3| unnamed protein product [Vitis vinifera]              222   8e-56
ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis...   222   8e-56

>ref|XP_003610624.1| Histone deacetylase [Medicago truncatula]
           gi|355511959|gb|AES93582.1| Histone deacetylase
           [Medicago truncatula] gi|388516653|gb|AFK46388.1|
           unknown [Medicago truncatula]
          Length = 140

 Score =  248 bits (632), Expect = 2e-63
 Identities = 113/130 (86%), Positives = 122/130 (93%)
 Frame = +2

Query: 134 GLSQEDYDLIYGSESGWVEARTSCDHLASLSADLTHIPTPDTPCNRCQHPSENWLCLSCK 313
           GLS+EDYDLI+GS+SGWV+ARTSC HL SLS DLTHIPTPDTPCNRCQHPSENWLCLSCK
Sbjct: 11  GLSEEDYDLIHGSQSGWVDARTSCHHLHSLSNDLTHIPTPDTPCNRCQHPSENWLCLSCK 70

Query: 314 DVLCSRFVNKHMLQHSRETNHSLALSFSDLSVWCFSCDAYLDAQVIVQLRPVYEVAYILK 493
           DVLC RFVN+HMLQH RETNHS+ALSFSDLSVWCFSCDAYLDAQVI QLRPV+EVAYILK
Sbjct: 71  DVLCGRFVNRHMLQHFRETNHSVALSFSDLSVWCFSCDAYLDAQVIQQLRPVHEVAYILK 130

Query: 494 FGEPPPLRAN 523
           F EPPP+ A+
Sbjct: 131 FDEPPPVVAS 140


>ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus communis]
           gi|223533136|gb|EEF34894.1| histone deacetylase hda2,
           putative [Ricinus communis]
          Length = 159

 Score =  230 bits (586), Expect = 4e-58
 Identities = 104/130 (80%), Positives = 118/130 (90%), Gaps = 1/130 (0%)
 Frame = +2

Query: 134 GLSQEDYDL-IYGSESGWVEARTSCDHLASLSADLTHIPTPDTPCNRCQHPSENWLCLSC 310
           GL ++D  + +YGSESGWVEA+TSCDHL SLS+DL+HI TPDTPC+RCQHPSENWLCLSC
Sbjct: 18  GLEEDDELMTVYGSESGWVEAKTSCDHLGSLSSDLSHISTPDTPCHRCQHPSENWLCLSC 77

Query: 311 KDVLCSRFVNKHMLQHSRETNHSLALSFSDLSVWCFSCDAYLDAQVIVQLRPVYEVAYIL 490
           KDVLCSRFVNKHMLQH  +T+H +ALS+SDLSVWCF+CDAYLDAQVI+QLRPVYE AYIL
Sbjct: 78  KDVLCSRFVNKHMLQHYHQTHHCVALSYSDLSVWCFACDAYLDAQVIMQLRPVYETAYIL 137

Query: 491 KFGEPPPLRA 520
           KFGE PP RA
Sbjct: 138 KFGEAPPFRA 147


>ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|118483848|gb|ABK93815.1|
           unknown [Populus trichocarpa]
           gi|222850311|gb|EEE87858.1| predicted protein [Populus
           trichocarpa]
          Length = 160

 Score =  227 bits (578), Expect = 3e-57
 Identities = 99/126 (78%), Positives = 116/126 (92%)
 Frame = +2

Query: 143 QEDYDLIYGSESGWVEARTSCDHLASLSADLTHIPTPDTPCNRCQHPSENWLCLSCKDVL 322
           ++D + +YG+ESGWVEARTSCDHLASLS+DL HIPTPDTPCNRCQHPSENWLCLSCKDVL
Sbjct: 18  EDDENDMYGAESGWVEARTSCDHLASLSSDLAHIPTPDTPCNRCQHPSENWLCLSCKDVL 77

Query: 323 CSRFVNKHMLQHSRETNHSLALSFSDLSVWCFSCDAYLDAQVIVQLRPVYEVAYILKFGE 502
           CSRFVNKHMLQH  +T+H LALS+SDLS+WCF+CD+YLDA+VI+QL+PV E A+ILKFGE
Sbjct: 78  CSRFVNKHMLQHFHQTSHCLALSYSDLSIWCFACDSYLDARVIIQLKPVSETAHILKFGE 137

Query: 503 PPPLRA 520
            PP R+
Sbjct: 138 APPFRS 143


>emb|CBI22472.3| unnamed protein product [Vitis vinifera]
          Length = 153

 Score =  222 bits (566), Expect = 8e-56
 Identities = 97/130 (74%), Positives = 112/130 (86%)
 Frame = +2

Query: 146 EDYDLIYGSESGWVEARTSCDHLASLSADLTHIPTPDTPCNRCQHPSENWLCLSCKDVLC 325
           ED + +YG+ESGWVEARTSCDHLASLS+DL HIPTP+TPCNRC +PSENWLCL CK+VLC
Sbjct: 17  EDEEFLYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEVLC 76

Query: 326 SRFVNKHMLQHSRETNHSLALSFSDLSVWCFSCDAYLDAQVIVQLRPVYEVAYILKFGEP 505
           SRFVNKHML+H ++ NH LALS+SDLS+WCFSCDAYLDAQ I+QL PVYE AYILKFG+ 
Sbjct: 77  SRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQA 136

Query: 506 PPLRANQHPA 535
           PP     + A
Sbjct: 137 PPFPTTDNQA 146


>ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
          Length = 154

 Score =  222 bits (566), Expect = 8e-56
 Identities = 97/130 (74%), Positives = 112/130 (86%)
 Frame = +2

Query: 146 EDYDLIYGSESGWVEARTSCDHLASLSADLTHIPTPDTPCNRCQHPSENWLCLSCKDVLC 325
           ED + +YG+ESGWVEARTSCDHLASLS+DL HIPTP+TPCNRC +PSENWLCL CK+VLC
Sbjct: 18  EDEEFLYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEVLC 77

Query: 326 SRFVNKHMLQHSRETNHSLALSFSDLSVWCFSCDAYLDAQVIVQLRPVYEVAYILKFGEP 505
           SRFVNKHML+H ++ NH LALS+SDLS+WCFSCDAYLDAQ I+QL PVYE AYILKFG+ 
Sbjct: 78  SRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQA 137

Query: 506 PPLRANQHPA 535
           PP     + A
Sbjct: 138 PPFPTTDNQA 147


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