BLASTX nr result

ID: Glycyrrhiza23_contig00021246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021246
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48620.1| unknown [Lotus japonicus]                              183   5e-44
ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago...   173   4e-41
ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycin...   164   2e-38
emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group] gi|3...   107   3e-21
ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protei...   103   4e-20

>gb|AFK48620.1| unknown [Lotus japonicus]
          Length = 161

 Score =  183 bits (464), Expect = 5e-44
 Identities = 95/119 (79%), Positives = 105/119 (88%), Gaps = 1/119 (0%)
 Frame = -2

Query: 639 MAAMREISATLLSISK-PHASPFQLLFLRRNTSKVFVKGLAFSTTEEKLAEAFSQYGNVL 463
           MAA+REI  +L+S+SK  HASP QL FLR  TSK+FVKGLAFSTTE+KLAEAFSQYG VL
Sbjct: 37  MAAVREICGSLMSLSKLQHASPSQLPFLRTMTSKIFVKGLAFSTTEDKLAEAFSQYGKVL 96

Query: 462 KADIVLNKGKNRSKGFGYVTFAKEEEARKAQIGMNRKILHGRVLYVDMEPSDKQKQSFS 286
           KADIVLN+ K RSKGFGYVTFAKEE+A+KAQIGMNRKILHGRVLYVDMEP DK K+S S
Sbjct: 97  KADIVLNRAKTRSKGFGYVTFAKEEDAQKAQIGMNRKILHGRVLYVDMEPPDKHKKSIS 155


>ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
           gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding
           protein [Medicago truncatula]
          Length = 134

 Score =  173 bits (439), Expect = 4e-41
 Identities = 90/114 (78%), Positives = 100/114 (87%)
 Frame = -2

Query: 639 MAAMREISATLLSISKPHASPFQLLFLRRNTSKVFVKGLAFSTTEEKLAEAFSQYGNVLK 460
           MA +  IS++LLS SKP  S F+ LFLRR TSK+FVKGLAFSTTEEKLAEAFSQYGNV+K
Sbjct: 1   MATLGGISSSLLSHSKPCTSVFRHLFLRRITSKIFVKGLAFSTTEEKLAEAFSQYGNVVK 60

Query: 459 ADIVLNKGKNRSKGFGYVTFAKEEEARKAQIGMNRKILHGRVLYVDMEPSDKQK 298
           ADIVLNK K R KGFGYVTFA+EEEARKAQIGMN KILHGRVLYVDM+P ++QK
Sbjct: 61  ADIVLNKAKKRCKGFGYVTFAEEEEARKAQIGMNGKILHGRVLYVDMDPPNEQK 114


>ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
           gi|255631468|gb|ACU16101.1| unknown [Glycine max]
          Length = 113

 Score =  164 bits (416), Expect = 2e-38
 Identities = 86/113 (76%), Positives = 98/113 (86%), Gaps = 1/113 (0%)
 Frame = -2

Query: 639 MAAMREISATLLS-ISKPHASPFQLLFLRRNTSKVFVKGLAFSTTEEKLAEAFSQYGNVL 463
           MA+MRE S  +LS + KPHASP QLLFLR  TSKVFVKGLAFSTTEE+LA+AFSQYG+VL
Sbjct: 1   MASMREFSRVILSHLKKPHASPSQLLFLRTMTSKVFVKGLAFSTTEEELAKAFSQYGSVL 60

Query: 462 KADIVLNKGKNRSKGFGYVTFAKEEEARKAQIGMNRKILHGRVLYVDMEPSDK 304
           KA+I+LNK KNRSKGFGYV FAKEEEA KAQI MN KILHGRV+YVD++  +K
Sbjct: 61  KANIILNKAKNRSKGFGYVIFAKEEEACKAQIDMNGKILHGRVIYVDVQLPNK 113


>emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
           gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa
           Japonica Group] gi|116309334|emb|CAH66418.1| H0622F05.1
           [Oryza sativa Indica Group] gi|116309399|emb|CAH66476.1|
           OSIGBa0137L20.5 [Oryza sativa Indica Group]
          Length = 137

 Score =  107 bits (267), Expect = 3e-21
 Identities = 62/128 (48%), Positives = 83/128 (64%), Gaps = 3/128 (2%)
 Frame = -2

Query: 645 LLMAAMREISATLLSISKP---HASPFQLLFLRRNTSKVFVKGLAFSTTEEKLAEAFSQY 475
           + MAA+RE S  L+S  +    +A PF L   R  T ++F+ GL+   TE+ LAEAFSQY
Sbjct: 1   MAMAALREASRRLVSRRESPAAYARPFLLTHSRGITYRLFIGGLSQFATEDSLAEAFSQY 60

Query: 474 GNVLKADIVLNKGKNRSKGFGYVTFAKEEEARKAQIGMNRKILHGRVLYVDMEPSDKQKQ 295
           G VL+A IV +K  NR KGFG+V FA EE A KA+  MN K+L+GRV+YVD+  +   + 
Sbjct: 61  GQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNGKVLNGRVIYVDIAKAKMNRT 120

Query: 294 SFSSEEAT 271
           + SS  AT
Sbjct: 121 TDSSPRAT 128


>ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
           gi|296084877|emb|CBI28286.3| unnamed protein product
           [Vitis vinifera]
          Length = 111

 Score =  103 bits (258), Expect = 4e-20
 Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
 Frame = -2

Query: 639 MAAMREISATLLSISK--PHASPFQLLFLRRNTSKVFVKGLAFSTTEEKLAEAFSQYGNV 466
           MA+ R IS T L  S   P+    QL+F R   S +FVKG++FSTTE+ LAEAFSQ+G V
Sbjct: 1   MASFRGISDTFLRFSSLNPYLLSSQLIFCRGIASTLFVKGISFSTTEKTLAEAFSQFGEV 60

Query: 465 LKADIVLNKGKNRSKGFGYVTFAKEEEARKAQIGMNRKILHGRVLYVD 322
           ++A I+++K K R KGF YVTF +E+EA KA   MN K++ GR + VD
Sbjct: 61  VEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTEMNGKVVDGRTVLVD 108


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