BLASTX nr result

ID: Glycyrrhiza23_contig00021243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021243
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...   119   7e-32
gb|AFK38641.1| unknown [Medicago truncatula]                          111   1e-22
gb|AFK49226.1| unknown [Lotus japonicus]                               68   2e-09
ref|YP_005090485.1| NADH dehydrogenase subunit 4 (mitochondrion)...    68   2e-09
sp|P93313.2|NU4M_ARATH RecName: Full=NADH-ubiquinone oxidoreduct...    65   1e-08

>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|355477312|gb|AES58515.1| hypothetical protein
           MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score =  119 bits (297), Expect(2) = 7e-32
 Identities = 74/136 (54%), Positives = 81/136 (59%)
 Frame = +2

Query: 182 LFISPVSFRRKGLRIPNPVGGRTALFAPAWLIASPRNDILCAPLTVXXXXXXXXXXXXXX 361
           LFISPVSFRRKGLRIPNPVGGRTALFAPAWLIASPRNDIL AP                 
Sbjct: 196 LFISPVSFRRKGLRIPNPVGGRTALFAPAWLIASPRNDIL-APYR-SRSVFATAGEAVVE 253

Query: 362 XXXXXXXXXNTRLGPFSKI*WKGPAHPKALM*YGNSWLETILMVLISGRNNQNQSPGWLV 541
                       +GP  K   + P+ PK      ++++   LM         NQSPGWLV
Sbjct: 254 AKPIATPTIKYEIGPLLKDLMEWPSPPK------SAYVIWELM---------NQSPGWLV 298

Query: 542 SLVIGDYLAWFGEHLL 589
           SLVIGDYLAWFGEHLL
Sbjct: 299 SLVIGDYLAWFGEHLL 314



 Score = 44.7 bits (104), Expect(2) = 7e-32
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +3

Query: 648 LVWMGVYPKVFLDCMHTYVSNLVQHGKFH 734
           L W G +  VF D MHTYVSNLVQHGKF+
Sbjct: 306 LAWFGEHLLVFPDRMHTYVSNLVQHGKFN 334


>gb|AFK38641.1| unknown [Medicago truncatula]
          Length = 57

 Score =  111 bits (278), Expect = 1e-22
 Identities = 55/56 (98%), Positives = 55/56 (98%)
 Frame = -1

Query: 225 MRRPFLRKETGEIKSYAIDRPFRSDFESIVLSFFIILFEAGRIENEMQKYGKSSKP 58
           MRRPFLRKETGEIKSYAIDRPFRSDFESIVLSFF ILFEAGRIENEMQKYGKSSKP
Sbjct: 1   MRRPFLRKETGEIKSYAIDRPFRSDFESIVLSFFSILFEAGRIENEMQKYGKSSKP 56


>gb|AFK49226.1| unknown [Lotus japonicus]
          Length = 122

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 648 LVWMGVYPKVFLDCMHTYVSNLVQHGKFH 734
           +VWMGVYPKVFLDCMHTYVSNLVQHGKFH
Sbjct: 94  VVWMGVYPKVFLDCMHTYVSNLVQHGKFH 122


>ref|YP_005090485.1| NADH dehydrogenase subunit 4 (mitochondrion) [Lotus japonicus]
           gi|357197349|gb|AET62945.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Lotus japonicus]
          Length = 495

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 648 LVWMGVYPKVFLDCMHTYVSNLVQHGKFH 734
           +VWMGVYPKVFLDCMHTYVSNLVQHGKFH
Sbjct: 467 VVWMGVYPKVFLDCMHTYVSNLVQHGKFH 495


>sp|P93313.2|NU4M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 4; AltName:
           Full=NADH dehydrogenase subunit 4
          Length = 495

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 648 LVWMGVYPKVFLDCMHTYVSNLVQHGKFH 734
           LVWMGVYPKVFLDCMHT VSNLVQHGKFH
Sbjct: 467 LVWMGVYPKVFLDCMHTSVSNLVQHGKFH 495


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