BLASTX nr result

ID: Glycyrrhiza23_contig00021235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021235
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent R...   523   e-146
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...   470   e-130
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   468   e-129
ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arab...   457   e-126
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...   455   e-126

>ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
            [Glycine max]
          Length = 707

 Score =  523 bits (1348), Expect = e-146
 Identities = 257/295 (87%), Positives = 278/295 (94%)
 Frame = -3

Query: 1030 LLDLGFRKDIEKIVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHKYVDTVGMGCVETP 851
            LLDLGFRKD+EKIVDCLPRQRQSLLFSAT+PKEVRR+SQLVLKREHKYVDTVGMGCVETP
Sbjct: 405  LLDLGFRKDVEKIVDCLPRQRQSLLFSATMPKEVRRVSQLVLKREHKYVDTVGMGCVETP 464

Query: 850  VQVKQSYIIAPHESHFQIVHHLLKEHILQAPDYKVIVFCITGMVTSLMYHLLREMKLNVR 671
            V+VKQSY+IAPHESHFQ+VH +LKEHILQ PDYKVIVFC+TGMVTSLMY+LLREMK+NVR
Sbjct: 465  VKVKQSYLIAPHESHFQLVHQILKEHILQTPDYKVIVFCVTGMVTSLMYNLLREMKMNVR 524

Query: 670  EIHSRKSQLYRTRISNEFKESKQMILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHXX 491
            EIHSRK QLYRTRIS+EF+ESKQ+ILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIH  
Sbjct: 525  EIHSRKPQLYRTRISDEFRESKQLILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHRL 584

Query: 490  XXXXXXXXXXXGILLIAPWEEYFLDEIKDLPLKEFPLPDIDPHTKLKIEHSMAKIDNDIK 311
                       G+LLIAPWEEYFLDEIKDLPL+ FPLPDI+PHTKLKIE+SMAKIDNDIK
Sbjct: 585  GRTGREDKEGEGVLLIAPWEEYFLDEIKDLPLQNFPLPDINPHTKLKIENSMAKIDNDIK 644

Query: 310  EAAYHAWLGYYNSIREVGREKTTIAELASRFSESIGLQRPPALFRKTALKMGLKD 146
            EAAYHAWLGYYNSIRE+GREKTT+AELA+RFSESIGLQRPPALFRKTA+KMGLKD
Sbjct: 645  EAAYHAWLGYYNSIREIGREKTTMAELANRFSESIGLQRPPALFRKTAIKMGLKD 699


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  470 bits (1210), Expect = e-130
 Identities = 225/295 (76%), Positives = 262/295 (88%)
 Frame = -3

Query: 1030 LLDLGFRKDIEKIVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHKYVDTVGMGCVETP 851
            LLDLGFRKD+EKI+DCLPRQRQSLLFSATIPKEVRRISQLVLKREH +++TVG+GCVETP
Sbjct: 496  LLDLGFRKDMEKILDCLPRQRQSLLFSATIPKEVRRISQLVLKREHAFINTVGVGCVETP 555

Query: 850  VQVKQSYIIAPHESHFQIVHHLLKEHILQAPDYKVIVFCITGMVTSLMYHLLREMKLNVR 671
             ++KQS++++PH  HFQ+VHHLLKEHILQAPDYKVIVFC TGMVTSLMY LLREM +NVR
Sbjct: 556  AKIKQSFLVSPHRLHFQVVHHLLKEHILQAPDYKVIVFCTTGMVTSLMYLLLREMNMNVR 615

Query: 670  EIHSRKSQLYRTRISNEFKESKQMILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHXX 491
            E+HSRK QLYRTR+SNEF+ESK++ILV+SDVS+RGMNYPDVTLVIQVGIP DRE YIH  
Sbjct: 616  EMHSRKPQLYRTRVSNEFRESKRLILVTSDVSARGMNYPDVTLVIQVGIPYDREHYIHRL 675

Query: 490  XXXXXXXXXXXGILLIAPWEEYFLDEIKDLPLKEFPLPDIDPHTKLKIEHSMAKIDNDIK 311
                       GILL+APWEEYFL+E+KDLPL++FPLP ID  T  K+E SM+KID+ +K
Sbjct: 676  GRTGREGKDGEGILLLAPWEEYFLNELKDLPLEKFPLPQIDSETNFKMEESMSKIDSSVK 735

Query: 310  EAAYHAWLGYYNSIREVGREKTTIAELASRFSESIGLQRPPALFRKTALKMGLKD 146
            E AYHAWLGYYNSIRE+GR+KTT+ ELA++FSESIGL +PP+LFRKTALKMGLKD
Sbjct: 736  EGAYHAWLGYYNSIREIGRDKTTLVELANQFSESIGLHKPPSLFRKTALKMGLKD 790


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 771

 Score =  468 bits (1204), Expect = e-129
 Identities = 224/295 (75%), Positives = 260/295 (88%)
 Frame = -3

Query: 1030 LLDLGFRKDIEKIVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHKYVDTVGMGCVETP 851
            LLDLGFRKD+EKI+DCLPR+R SL+FSATIPKEVRRISQLVLKREH ++DTVG+G VETP
Sbjct: 469  LLDLGFRKDVEKIIDCLPRERHSLMFSATIPKEVRRISQLVLKREHAFIDTVGLGSVETP 528

Query: 850  VQVKQSYIIAPHESHFQIVHHLLKEHILQAPDYKVIVFCITGMVTSLMYHLLREMKLNVR 671
             +VKQ  ++ PHE HFQ+VHH LKEHILQ PDYKVIVFC TGMVTSLMY LLREMK+NV+
Sbjct: 529  SKVKQFSVVVPHELHFQVVHHFLKEHILQTPDYKVIVFCTTGMVTSLMYTLLREMKMNVK 588

Query: 670  EIHSRKSQLYRTRISNEFKESKQMILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHXX 491
            EIHSRK QLYRTR+S+EF+ES++ ILVSSDVS+RGMNYPDVTLVIQVG+P+DREQYIH  
Sbjct: 589  EIHSRKPQLYRTRVSDEFRESRRSILVSSDVSARGMNYPDVTLVIQVGLPTDREQYIHRL 648

Query: 490  XXXXXXXXXXXGILLIAPWEEYFLDEIKDLPLKEFPLPDIDPHTKLKIEHSMAKIDNDIK 311
                       GILL+APWEEYFLDE++DLPL + P+PDIDP TKLK+E SM+KID+ +K
Sbjct: 649  GRTGREGKDGEGILLLAPWEEYFLDELEDLPLDKLPIPDIDPETKLKVEDSMSKIDSSVK 708

Query: 310  EAAYHAWLGYYNSIREVGREKTTIAELASRFSESIGLQRPPALFRKTALKMGLKD 146
            EAAYHAWLGYYNSIR++GR+KTT+ ELA+RF ESIGLQRPP LFRKTALKMGLK+
Sbjct: 709  EAAYHAWLGYYNSIRKIGRDKTTLVELANRFCESIGLQRPPPLFRKTALKMGLKN 763


>ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arabidopsis lyrata subsp.
            lyrata] gi|297332258|gb|EFH62676.1| hypothetical protein
            ARALYDRAFT_893124 [Arabidopsis lyrata subsp. lyrata]
          Length = 808

 Score =  457 bits (1176), Expect = e-126
 Identities = 220/294 (74%), Positives = 257/294 (87%)
 Frame = -3

Query: 1030 LLDLGFRKDIEKIVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHKYVDTVGMGCVETP 851
            LLDLGFR+D+EKI+DCLPRQRQSLLFSATIPKEVRR+SQLVLKR+H Y+DT+G+GCVET 
Sbjct: 506  LLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETH 565

Query: 850  VQVKQSYIIAPHESHFQIVHHLLKEHILQAPDYKVIVFCITGMVTSLMYHLLREMKLNVR 671
             +VKQS I+APHESHF +V HLLKEHI   PDYK+IVFC TGMVTSLMY LLREMKL+VR
Sbjct: 566  DKVKQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLSVR 625

Query: 670  EIHSRKSQLYRTRISNEFKESKQMILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHXX 491
            EIH+RK QL+RTR+S+EFKESK++ILV+SDVS+RGMNYPDVTLVIQVGIPSDREQYIH  
Sbjct: 626  EIHARKPQLHRTRVSDEFKESKRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRL 685

Query: 490  XXXXXXXXXXXGILLIAPWEEYFLDEIKDLPLKEFPLPDIDPHTKLKIEHSMAKIDNDIK 311
                       G+LLIAPWE YFLDE+KDLPL+  P+PD+D   KL+++ SMAKID  IK
Sbjct: 686  GRTGREGKGGEGLLLIAPWERYFLDELKDLPLEPIPVPDLDSRVKLQVDQSMAKIDTSIK 745

Query: 310  EAAYHAWLGYYNSIREVGREKTTIAELASRFSESIGLQRPPALFRKTALKMGLK 149
            EAAYHAWLGYYNS+RE GR+KTT+AELA+RF  SIGL++PPALFR+TA+KMGLK
Sbjct: 746  EAAYHAWLGYYNSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLK 799


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
            [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
            PREDICTED: putative DEAD-box ATP-dependent RNA helicase
            33-like [Cucumis sativus]
          Length = 813

 Score =  455 bits (1170), Expect = e-126
 Identities = 228/295 (77%), Positives = 254/295 (86%)
 Frame = -3

Query: 1030 LLDLGFRKDIEKIVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHKYVDTVGMGCVETP 851
            LLDLGFRKDIEKIVDCLPRQRQSLLFSATIP+EVRRISQLVLKREH +V+ VG+GCVETP
Sbjct: 511  LLDLGFRKDIEKIVDCLPRQRQSLLFSATIPREVRRISQLVLKREHVFVNNVGIGCVETP 570

Query: 850  VQVKQSYIIAPHESHFQIVHHLLKEHILQAPDYKVIVFCITGMVTSLMYHLLREMKLNVR 671
            VQVKQS +IAPH SHFQIV HLLKEHI   PDYKVIVFC TGMVTSL++ L REMK+NVR
Sbjct: 571  VQVKQSCLIAPHGSHFQIVCHLLKEHISCTPDYKVIVFCTTGMVTSLLHVLFREMKMNVR 630

Query: 670  EIHSRKSQLYRTRISNEFKESKQMILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHXX 491
            E+HSRK QLYRTRIS+EFK+S+Q+ILV+SDVS+RGMNYPDVTLV+Q+GIPSDREQYIH  
Sbjct: 631  EMHSRKPQLYRTRISDEFKQSRQLILVTSDVSARGMNYPDVTLVLQLGIPSDREQYIHRL 690

Query: 490  XXXXXXXXXXXGILLIAPWEEYFLDEIKDLPLKEFPLPDIDPHTKLKIEHSMAKIDNDIK 311
                       GILLIAPWEEYFL+E+KDLPL+   LP +D   KLK+E SMAKID  IK
Sbjct: 691  GRTGREGKEGQGILLIAPWEEYFLEELKDLPLERRRLPQLDSGLKLKVEESMAKIDTSIK 750

Query: 310  EAAYHAWLGYYNSIREVGREKTTIAELASRFSESIGLQRPPALFRKTALKMGLKD 146
            E AYHAWLGYYNSIR +GR+KTT+ EL  +FSESIGLQ PPALFRKTALKMGLKD
Sbjct: 751  EGAYHAWLGYYNSIRGIGRDKTTLVELGKQFSESIGLQNPPALFRKTALKMGLKD 805


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