BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021231
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                   550   e-154
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...   550   e-154
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    91   5e-16
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    77   8e-12
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    75   2e-11

>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  550 bits (1417), Expect = e-154
 Identities = 270/387 (69%), Positives = 306/387 (79%), Gaps = 11/387 (2%)
 Frame = +1

Query: 1    DRDIQYLKDNYIWADSTVSISMDLAQLHHRYDRSEWWGILVCLVIEDVVSS-PSRDYRVG 177
            DRDIQYLKDNYIWADSTVSIS+++AQL  RYDRSEWWG+LV LVIEDVVSS PS+DYRVG
Sbjct: 855  DRDIQYLKDNYIWADSTVSISINMAQLRQRYDRSEWWGLLVSLVIEDVVSSTPSQDYRVG 914

Query: 178  WISKVPTINNILHQLCHKLLEHGFISGIPNHKYPHLLVLYIPVPKS-RWSYVQDXXXXXX 354
            WISKVP  N+IL QL  KLLEHGFISG+PN K+PHLLVLYIPVP + RWSYVQD      
Sbjct: 915  WISKVPATNHILRQLFQKLLEHGFISGVPNSKHPHLLVLYIPVPAAFRWSYVQDKFQLIF 974

Query: 355  XXXXXXXXXXXXXCGWRVICKEDAEVWRRKLSECNTSSANQCVPRNNCLSSSP------- 513
                         CGWR++CKEDA++ R KLSEC+ SSA Q V R NCLSSS        
Sbjct: 975  FSSSLKSKLVIKKCGWRILCKEDAQLMRTKLSECSISSAKQYVSRGNCLSSSSSSSSSDY 1034

Query: 514  -FASWRWISNLKVPQNRKTFLLAILCDRLPSIARCRFCSLEGATTIHVLRDCRRACAIWS 690
               SWRWIS LKVP+  KTFLLA+LC+RLP+IA+CRFCS+EGATTIHVLRDCRRACAIW 
Sbjct: 1035 LITSWRWISRLKVPRRHKTFLLAVLCERLPTIAKCRFCSMEGATTIHVLRDCRRACAIWV 1094

Query: 691  QMVPPEVHDEFFSMSLHDWMHRFLRKPWLPNNCGDYDVDCLRFTVTTSLLWKD-GNNSIP 867
            QMVPP++ DEFFS+SLHDWMHRFLR+ WLPN   DYD DCL+F+VTT LLWKD G+NSIP
Sbjct: 1095 QMVPPQMQDEFFSISLHDWMHRFLRRSWLPNIREDYDADCLKFSVTTFLLWKDGGDNSIP 1154

Query: 868  EGGSLTDDGLFSMIQSLVQEYARVLHLNKEEGSSSLRHFIKLNVDGCCMDSPGNAGYGGL 1047
            EG SLTD+GL+S+I+SLVQE+           +S  R FIKLNVDGCCMD+P +AGYGGL
Sbjct: 1155 EGDSLTDNGLYSIIKSLVQEH-----------TSPTRRFIKLNVDGCCMDNPRSAGYGGL 1203

Query: 1048 LRDVEGKWLGGFYGSLGITTNMKAELY 1128
             RDV+G WLGGFYGSLG TT MKAELY
Sbjct: 1204 FRDVDGNWLGGFYGSLGFTTKMKAELY 1230


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
            gi|355500090|gb|AES81293.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1579

 Score =  550 bits (1417), Expect = e-154
 Identities = 270/387 (69%), Positives = 306/387 (79%), Gaps = 11/387 (2%)
 Frame = +1

Query: 1    DRDIQYLKDNYIWADSTVSISMDLAQLHHRYDRSEWWGILVCLVIEDVVSS-PSRDYRVG 177
            DRDIQYLKDNYIWADSTVSIS+++AQL  RYDRSEWWG+LV LVIEDVVSS PS+DYRVG
Sbjct: 1038 DRDIQYLKDNYIWADSTVSISINMAQLRQRYDRSEWWGLLVSLVIEDVVSSTPSQDYRVG 1097

Query: 178  WISKVPTINNILHQLCHKLLEHGFISGIPNHKYPHLLVLYIPVPKS-RWSYVQDXXXXXX 354
            WISKVP  N+IL QL  KLLEHGFISG+PN K+PHLLVLYIPVP + RWSYVQD      
Sbjct: 1098 WISKVPATNHILRQLFQKLLEHGFISGVPNSKHPHLLVLYIPVPAAFRWSYVQDKFQLIF 1157

Query: 355  XXXXXXXXXXXXXCGWRVICKEDAEVWRRKLSECNTSSANQCVPRNNCLSSSP------- 513
                         CGWR++CKEDA++ R KLSEC+ SSA Q V R NCLSSS        
Sbjct: 1158 FSSSLKSKLVIKKCGWRILCKEDAQLMRTKLSECSISSAKQYVSRGNCLSSSSSSSSSDY 1217

Query: 514  -FASWRWISNLKVPQNRKTFLLAILCDRLPSIARCRFCSLEGATTIHVLRDCRRACAIWS 690
               SWRWIS LKVP+  KTFLLA+LC+RLP+IA+CRFCS+EGATTIHVLRDCRRACAIW 
Sbjct: 1218 LITSWRWISRLKVPRRHKTFLLAVLCERLPTIAKCRFCSMEGATTIHVLRDCRRACAIWV 1277

Query: 691  QMVPPEVHDEFFSMSLHDWMHRFLRKPWLPNNCGDYDVDCLRFTVTTSLLWKD-GNNSIP 867
            QMVPP++ DEFFS+SLHDWMHRFLR+ WLPN   DYD DCL+F+VTT LLWKD G+NSIP
Sbjct: 1278 QMVPPQMQDEFFSISLHDWMHRFLRRSWLPNIREDYDADCLKFSVTTFLLWKDGGDNSIP 1337

Query: 868  EGGSLTDDGLFSMIQSLVQEYARVLHLNKEEGSSSLRHFIKLNVDGCCMDSPGNAGYGGL 1047
            EG SLTD+GL+S+I+SLVQE+           +S  R FIKLNVDGCCMD+P +AGYGGL
Sbjct: 1338 EGDSLTDNGLYSIIKSLVQEH-----------TSPTRRFIKLNVDGCCMDNPRSAGYGGL 1386

Query: 1048 LRDVEGKWLGGFYGSLGITTNMKAELY 1128
             RDV+G WLGGFYGSLG TT MKAELY
Sbjct: 1387 FRDVDGNWLGGFYGSLGFTTKMKAELY 1413


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
            transferase, Ribonuclease H fold [Medicago truncatula]
          Length = 729

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
 Frame = +1

Query: 493  NCLSSSPFA---SWRWISNLKVPQNRKTFLLAILCDRLPSIAR-----------CRFCSL 630
            N    +PFA    W+ + N K P   +TF+      R+ +  R           C  C+ 
Sbjct: 451  NLQQENPFAVGGDWKTLWNWKGPHRIQTFIWLAAHGRILTNYRRSKWGVGISPTCPCCAR 510

Query: 631  EGATTIHVLRDCRRACAIWSQMVPPEVHDEFFSMSLHDWMHRFLRKPWLPNNCGDYDVDC 810
            E  T IHVLRDC  +  +W +++P      FFS    +W+   L K  + +N   +    
Sbjct: 511  EDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREWVFNNLNKKGIGDNPATWQT-- 568

Query: 811  LRFTVTTSLLWKDGNNSIPEGGSLTDDGLFSMIQSL---VQEYARVLHLNKEEGSSSL-- 975
              F  T   LW   N SI E G         +IQ     +++  +++H +  +  +    
Sbjct: 569  -TFMTTCWYLWNWRNKSIFEIGFQRPSNPTLVIQKFTREIEDNTKLVHKSSHQKETIYIG 627

Query: 976  -----RHFIKLNVDGCCMDSPGNAGYGGLLRDVEGKWLGGFYGSLGITTNMKAELY 1128
                   ++KLN DG    S   AG GGLLRD +G+W+ G++  +G+     AE++
Sbjct: 628  WMRPPFGWVKLNCDGAWKGSGTLAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMW 683


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 77.0 bits (188), Expect = 8e-12
 Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 30/266 (11%)
 Frame = +1

Query: 418  EDAEVW-RRKLSECNTSSANQC-----VPRNNCLSSSPFASWRWISNLKVPQNRKTFLLA 579
            EDA +W + K    +T S         VP  + +   P  SW WI NL+VP+  K FL+ 
Sbjct: 82   EDALIWSQNKNGTYSTKSGFHWLLTFRVPATDII---PHPSWSWIWNLQVPEKYK-FLIW 137

Query: 580  ILCDRL-PSIA-----------RCRFCSLEGATTIHVLRDCRRACAIWSQMVPPEVHDEF 723
            + C  + P+++            C  C  E  T +H +RDC  + +IW Q +    +D F
Sbjct: 138  LACQNVVPTLSLLHRRNIAPSPTCARCGEEDETFLHCVRDCHFSRSIW-QKIGFTGNDFF 196

Query: 724  FSMSLHDWMHRFLRKPWLPNNCGDYDVDCLRFTVTTSLLWKDGNNSIPEGGSLTDDGLFS 903
             + S HDW      K  + ++  D     L +       W+  N       +++   LF 
Sbjct: 197  TATSAHDWF-----KIGMSSSLPDIFFGGLWWA------WRHRNLMCLNNETMS---LFR 242

Query: 904  MIQSLVQEYARVLH-LNKEEGSSSLRHFIK----------LNVDGCCMDSPGNAGYGGLL 1050
            +  ++V     +    + EE  +    F+K          LNVDG C+ +P   GYGG+L
Sbjct: 243  LCNNIVSAATYIKSAFDSEENVNHSDRFVKWNNRNHHDHILNVDGSCLGTPSRTGYGGIL 302

Query: 1051 RDVEGKWLGGFYGSLGITTN-MKAEL 1125
            R+  G ++ GF G +  +T+ ++AEL
Sbjct: 303  RNSAGLFISGFSGFIPNSTDILQAEL 328


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
 Frame = +1

Query: 613  CRFCSLEGATTIHVLRDCRRACAIWSQMVPPEVHDEFFSMSLHDWMHRFLRKPWLPNNCG 792
            C+ C     T IH+LRDC     IW++++P      FF+ +L +W++  L      + C 
Sbjct: 508  CQVCKGGDETIIHILRDCPAMYGIWTRIIPRRKRGTFFTQTLLEWVYDNLGDSGKVDGC- 566

Query: 793  DYDVDCLRFTVTTSLLWKDGNNSIPEGGSLTDDGLFSMIQSLVQEYARVLHLNKEEGSSS 972
                 C+R+       W+ GN      G   D     M++ +    + V+  +  EG+S 
Sbjct: 567  --PWSCVRW----GWKWRCGN-VFGVNGKCRD-----MVKFVRDRASEVIQAHLVEGNSG 614

Query: 973  ---------------LRHFIKLNVDGCCMDSPGNAGYGGLLRDVEGKWLGGFYGSLGITT 1107
                              ++KLN DG    +PG A  GG+LR  +G W+GGF  ++GI +
Sbjct: 615  KIRGRIERMVSWVKPAEGWLKLNTDGASKGNPGLATAGGILRQQDGSWIGGFAVNIGICS 674

Query: 1108 NMKAELY 1128
               AEL+
Sbjct: 675  APLAELW 681