BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021222
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
ref|XP_003603286.1| Pentatricopeptide repeat-containing protein ...   128   6e-28
ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    79   3e-13

>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  167 bits (424), Expect = 6e-40
 Identities = 85/126 (67%), Positives = 96/126 (76%)
 Frame = +2

Query: 2   SVSSCCALTGINFYVLSKNGFLGETNFVKMKTLSKGSLGNWKKRGKSHLGHPVSGTKCCA 181
           S+SSCCA +G N YV+S NGF GET F KMK+   GS   WKK GK  LG  V  T+C A
Sbjct: 15  SLSSCCAFSGTNVYVMSNNGFFGETPFFKMKSFPNGSSVIWKKHGKRQLGLRVFETRC-A 73

Query: 182 REVVVVNGKSKAKVSSEEVIGILKSISDPSSALSYFKLVSQLPNFVHTTDACDYMLELLS 361
            EVVVVNGKSK+ VSSEEVIG LKSISDP+SALSYFK+VSQLPN VHT + C+YMLE L 
Sbjct: 74  HEVVVVNGKSKSSVSSEEVIGALKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLR 133

Query: 362 AHGRIE 379
            HGR+E
Sbjct: 134 VHGRVE 139


>ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492334|gb|AES73537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  128 bits (321), Expect = 6e-28
 Identities = 76/132 (57%), Positives = 92/132 (69%), Gaps = 7/132 (5%)
 Frame = +2

Query: 5   VSSCCALTGINFYVLSKNGFLGETNFVKMKTLSKGSLGNWKKRGKSHLGHPV--SGTKCC 178
           +S C  LT  NFYVL+ +G    TNFVK+KTLS GSL N KK G + +GH    + T+C 
Sbjct: 18  MSFCYTLTDTNFYVLTNHGG-PTTNFVKIKTLSNGSLLNLKKHGTTRVGHRAFRTITRCN 76

Query: 179 A-REVVVVNG----KSKAKVSSEEVIGILKSISDPSSALSYFKLVSQLPNFVHTTDACDY 343
              ++VVVN     K+K  VS EEV+ ILKSISDP+SA SYFK+VSQL NFVHTTDAC+Y
Sbjct: 77  HDNDLVVVNNGKRKKNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNY 136

Query: 344 MLELLSAHGRIE 379
           MLE+L    RIE
Sbjct: 137 MLEILREQRRIE 148


>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 59/134 (44%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
 Frame = +2

Query: 2   SVSSCC-------ALTGINFYVLSKNGFLGETNFVKMKTLSKGSLGNWKKRGKSHLGHPV 160
           S SSCC       A+TG    VLS N  LG      +K L  G   NWKK  K  +G  V
Sbjct: 8   SSSSCCSKFKYGCAVTGTKPSVLSCNESLGGIKIGNLKVLPSGCRVNWKKHRKKQVG--V 65

Query: 161 SGTKCCAR-EVVVVNGKSKAKVSSEEVIGILKSISDPSSALSYFKLVSQLPNFVHTTDAC 337
            G    +  +VVVV  K ++ +SSEEV  +LKSISDP+ A S+F  V+++P  +HTT+ C
Sbjct: 66  CGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETC 125

Query: 338 DYMLELLSAHGRIE 379
           +Y+LE+L AH R+E
Sbjct: 126 NYVLEMLRAHRRVE 139


>ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|222854685|gb|EEE92232.1|
           predicted protein [Populus trichocarpa]
          Length = 1115

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/109 (47%), Positives = 66/109 (60%)
 Frame = +2

Query: 53  KNGFLGETNFVKMKTLSKGSLGNWKKRGKSHLGHPVSGTKCCAREVVVVNGKSKAKVSSE 232
           KNG LG   F  ++    GS  NWKK  K  +       K    E +VVNGK +   SS+
Sbjct: 34  KNGSLGGEKFGTLRVFPFGSNVNWKKNNKKQVAFCGFALKS-QNEELVVNGKPRKGSSSD 92

Query: 233 EVIGILKSISDPSSALSYFKLVSQLPNFVHTTDACDYMLELLSAHGRIE 379
           EV+G+L SISDP  AL YFK V +LPN VHTT+ C++MLE+L  H R+E
Sbjct: 93  EVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVE 141


>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
 Frame = +2

Query: 110 SLGNWKKRGKSH-------LGHPVSGTKCCAREVVVVNGKSKAKVSSEEVIGILKSISDP 268
           S+ NWKK  K         L +P         +V+VV GK++ +VS +EV+G+LKS++DP
Sbjct: 51  SMVNWKKHRKKRKDFCRLALQNP--------EQVMVVKGKTEIRVSEDEVLGVLKSMTDP 102

Query: 269 SSALSYFKLVSQLPNFVHTTDACDYMLELLSAHGRIE 379
             ALSYF  +S+ P  +HTT+ C++MLE L  H ++E
Sbjct: 103 IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVE 139