BLASTX nr result

ID: Glycyrrhiza23_contig00021205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021205
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [M...   301   7e-80
ref|XP_003547218.1| PREDICTED: uncharacterized protein LOC100817...   295   7e-78
ref|XP_003541655.1| PREDICTED: uncharacterized protein LOC100778...   289   4e-76
ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_002516852.1| pax transcription activation domain interact...    97   5e-18

>ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [Medicago truncatula]
            gi|355483067|gb|AES64270.1| Mediator of DNA damage
            checkpoint protein [Medicago truncatula]
          Length = 1155

 Score =  301 bits (772), Expect = 7e-80
 Identities = 159/247 (64%), Positives = 187/247 (75%)
 Frame = +2

Query: 2    GDIFSRRKEDFFEDGTQGPRSLPGFRKIKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLG 181
            G I+ RRKE FFEDGT  PRSLPG RKIKSRRP  D++EEE+S+IP KRKTA  S+S+LG
Sbjct: 356  GGIYLRRKEYFFEDGTHRPRSLPGCRKIKSRRPKGDEEEEEQSSIPVKRKTAARSESRLG 415

Query: 182  MHNLKIRDNTIQEITRELKRNLANELDEQLNSSCSRGEMEPNANEDGQEMLDVGLDTQMA 361
            MHNLKIRD+ IQ  TR+L+RN+A+ELDEQ++++CSRGEM PN+NE G EMLDVG+DTQ+A
Sbjct: 416  MHNLKIRDDNIQGATRKLERNIADELDEQVDANCSRGEMGPNSNEVGHEMLDVGVDTQIA 475

Query: 362  AEAMEALCNTGDIVDHVANDATRVTRSRSTYQLNNSSIGKRRAVTSNQHSGQYDRKRKVD 541
            AEAMEAL NT ++VDHV NDATRVTRSRS+YQLNNSS GK   VT  +H+G+YDRKRKVD
Sbjct: 476  AEAMEALYNTVEVVDHVTNDATRVTRSRSSYQLNNSSTGKMGPVTPKEHTGKYDRKRKVD 535

Query: 542  VKSDLQTSDLSXXXXXXXXXXXXDNVMSRSKKSKLNAEGXXXXXXXXXXXXXXXXXXEQR 721
            VKS LQTS LS             NV+SRSKKSKLNAEG                  E+R
Sbjct: 536  VKSVLQTSGLSKKCTKKVGQCEKSNVVSRSKKSKLNAEGNQTSGANENGRIVSSPVGERR 595

Query: 722  KAAGALK 742
            K+A ALK
Sbjct: 596  KSAKALK 602


>ref|XP_003547218.1| PREDICTED: uncharacterized protein LOC100817763 [Glycine max]
          Length = 1147

 Score =  295 bits (755), Expect = 7e-78
 Identities = 160/247 (64%), Positives = 181/247 (73%)
 Frame = +2

Query: 2    GDIFSRRKEDFFEDGTQGPRSLPGFRKIKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLG 181
            GDIF RRKEDFF+   + PRSLPGF+K K  R NDDK+++++ +IP+KRKTAVHSDSKLG
Sbjct: 362  GDIFLRRKEDFFKGEMRRPRSLPGFQKSKVHRLNDDKEDKKQFSIPNKRKTAVHSDSKLG 421

Query: 182  MHNLKIRDNTIQEITRELKRNLANELDEQLNSSCSRGEMEPNANEDGQEMLDVGLDTQMA 361
            MH LK+RDN I E T  LKRNLANELDEQ N+ CSRGEMEPNAN   QEMLDVGLDTQMA
Sbjct: 422  MHILKVRDNIIPEATM-LKRNLANELDEQFNTDCSRGEMEPNANACAQEMLDVGLDTQMA 480

Query: 362  AEAMEALCNTGDIVDHVANDATRVTRSRSTYQLNNSSIGKRRAVTSNQHSGQYDRKRKVD 541
            AEAMEALCN GDIVDHVAN+AT VTRS  TY+LNNSS GK  + +S + S QYDRKRKVD
Sbjct: 481  AEAMEALCNVGDIVDHVANNATHVTRSGLTYKLNNSSTGKVGSGSSKERSVQYDRKRKVD 540

Query: 542  VKSDLQTSDLSXXXXXXXXXXXXDNVMSRSKKSKLNAEGXXXXXXXXXXXXXXXXXXEQR 721
            VKS LQTS LS            DN+M+RSK+SKLNAEG                   QR
Sbjct: 541  VKSKLQTSGLSKKSTKEVKQCTEDNMMTRSKRSKLNAEGNQTSSANENGRVSLSPIIAQR 600

Query: 722  KAAGALK 742
            K+ GALK
Sbjct: 601  KSDGALK 607


>ref|XP_003541655.1| PREDICTED: uncharacterized protein LOC100778695 [Glycine max]
          Length = 803

 Score =  289 bits (740), Expect = 4e-76
 Identities = 157/247 (63%), Positives = 178/247 (72%)
 Frame = +2

Query: 2    GDIFSRRKEDFFEDGTQGPRSLPGFRKIKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLG 181
            GDIF RRKEDFF+     PRSLPGF+K K  R NDDK+++++ +IP++RKTAVHSDSKLG
Sbjct: 367  GDIFLRRKEDFFKGEMHRPRSLPGFQKSKVCRLNDDKEDKKQLSIPNRRKTAVHSDSKLG 426

Query: 182  MHNLKIRDNTIQEITRELKRNLANELDEQLNSSCSRGEMEPNANEDGQEMLDVGLDTQMA 361
            MH LK RDN I E T  LKRNLANELDEQ N+ CSRGEMEPNAN    EMLDVGLDTQMA
Sbjct: 427  MHILKARDNIIPEATM-LKRNLANELDEQFNTDCSRGEMEPNANACAPEMLDVGLDTQMA 485

Query: 362  AEAMEALCNTGDIVDHVANDATRVTRSRSTYQLNNSSIGKRRAVTSNQHSGQYDRKRKVD 541
            AEAMEALCN GDIVDHVANDAT VTRS   Y++NNSS GK  + +S +  GQYD+KRKVD
Sbjct: 486  AEAMEALCNVGDIVDHVANDATHVTRSGLMYKVNNSSTGKVGSGSSKERLGQYDKKRKVD 545

Query: 542  VKSDLQTSDLSXXXXXXXXXXXXDNVMSRSKKSKLNAEGXXXXXXXXXXXXXXXXXXEQR 721
            VKS LQTS LS            DN+M+RSK+SKLNAEG                   QR
Sbjct: 546  VKSKLQTSGLSKKSTKEVRQWTKDNMMTRSKRSKLNAEGNQTSSANENGRVSLSPLIAQR 605

Query: 722  KAAGALK 742
            K+AGALK
Sbjct: 606  KSAGALK 612


>ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|222863432|gb|EEF00563.1|
            predicted protein [Populus trichocarpa]
          Length = 1102

 Score =  105 bits (261), Expect = 1e-20
 Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
 Frame = +2

Query: 2    GDIFSRRKEDFFEDGTQGPRSLPGFRKIKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLG 181
            GDIF RRKE FF     G RS     K K  +    +D E +SN+  +    VHS+SK+ 
Sbjct: 374  GDIFRRRKEMFFGTANLGKRSFMKPSKSKGNQLGVCRDNEGKSNV--QNVIEVHSESKID 431

Query: 182  MHNLKIRDNTIQEITRELKRNLANELDEQLNSSCSRGEMEPNANEDGQEMLDVGLDTQMA 361
            + +L+     +QE    + RNL N+ DEQ  +  S G++E    ++  EMLD+GLDTQMA
Sbjct: 432  LCSLRANKKMMQETETNVSRNLFNKFDEQPEADTSAGQLEALTRKEVPEMLDIGLDTQMA 491

Query: 362  AEAMEALCNTGDIVDHVANDATRVTRSRSTYQLNNSSIGK-RRAVTSNQHS--------- 511
            AEAMEAL +   I     ND  ++    S   +  S   K ++++ S QHS         
Sbjct: 492  AEAMEALFHGEGIAYDATNDGQQIPAVNSKDLMEGSLRSKAKKSIHSKQHSLSNNEDIGV 551

Query: 512  GQYDRKRKVDVKSDLQTSDLS---XXXXXXXXXXXXDNVMSRSKKSKLNA 652
              +  K+ + + + L    L+               D VM+RSK+++ +A
Sbjct: 552  TTHQSKKTLKISAKLGKQSLTPSQKCPENVRKQCDKDVVMTRSKRARSDA 601


>ref|XP_002516852.1| pax transcription activation domain interacting protein, putative
            [Ricinus communis] gi|223543940|gb|EEF45466.1| pax
            transcription activation domain interacting protein,
            putative [Ricinus communis]
          Length = 1178

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 76/230 (33%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
 Frame = +2

Query: 2    GDIFSRRKEDFFEDGTQGPRSLPGFRKIKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLG 181
            GDIF RRKE+F    + G RSL   +  K  + +  +    +S++ +++   VHSDSK+ 
Sbjct: 365  GDIFRRRKEEFLGTRSLGQRSLSKSQMAKGNQLDGYRGNRGKSSVHNEK--VVHSDSKIV 422

Query: 182  MHNLKIRDNTIQEITRELKRNLANELDEQLNSSCSRGEMEPNAN-EDGQEMLDVGLDTQM 358
            +H  K  D    E    +++NL NE DEQ N + S G+ E     +D  E  ++GLDTQM
Sbjct: 423  LHGPKQNDKRAPEADLNIRKNLVNEFDEQSNKATSAGQPEAALTIKDMLEAPNIGLDTQM 482

Query: 359  AAEAMEALCNTGDIVDHVANDATRVTRSRSTYQLNNSSIGKRRAVTSNQ-HSGQYD---- 523
            AAEAM AL N   I +   ND      S    + +    GK+ + +  Q    +YD    
Sbjct: 483  AAEAMAALFNGNGIPNSDGNDVP--GNSEDFLKGSRGRKGKKSSHSKQQSFDKEYDIGVA 540

Query: 524  -----RKRKVDVKSDLQTS-DLSXXXXXXXXXXXXDNVMSRSKKSKLNAE 655
                 + +K+  KS  Q S                D VM+RSK++KL+AE
Sbjct: 541  TRNSSKTKKICDKSSKQPSISYQKHSETFRIELDKDLVMTRSKRAKLDAE 590


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