BLASTX nr result
ID: Glycyrrhiza23_contig00021197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00021197
(1743 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containi... 851 0.0
ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containi... 851 0.0
ref|XP_003614153.1| Pentatricopeptide repeat-containing protein ... 834 0.0
ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containi... 814 0.0
emb|CBI14894.3| unnamed protein product [Vitis vinifera] 800 0.0
>ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 851 bits (2199), Expect = 0.0
Identities = 426/546 (78%), Positives = 472/546 (86%), Gaps = 1/546 (0%)
Frame = +3
Query: 3 GEIVHLAKNLPQNLTLEEALAVYEGR-VSEKXXXXXXXXXXXXXXXXXXXXXXYFFQWMR 179
GEIV LA+NLPQNLTLEEALA YEGR VSEK YFFQWMR
Sbjct: 160 GEIVQLARNLPQNLTLEEALAEYEGRRVSEKECWEVLKLLGDEQLLVCCL---YFFQWMR 216
Query: 180 SQEPSLVTPRACTLLFPLLGRAKMGDKLMVLFRNLPSNKEFRDACVYNAAISGLLSSGRY 359
SQEPSLVTPRACT+LFPLLG+AKMGDKLMVLF NLPS++EFRD+ VYNAAISGLLSS RY
Sbjct: 217 SQEPSLVTPRACTVLFPLLGKAKMGDKLMVLFTNLPSSREFRDSHVYNAAISGLLSSARY 276
Query: 360 EDAWKVYESMEKDDIHPDHVTCTIMITVMRKLGHSAKDAWQFFEKMNTKGVGWSEEVLGA 539
EDAWKVYESME D++ PDHVTC+IM+ VMRKLGHSAKDAWQFFEKMN KGV W EEVLGA
Sbjct: 277 EDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGA 336
Query: 540 LIKSFCIEGLLSEALIIQSEMEKNGVSSNAIVYNTMMDAYCKSNRVEEAEGLFVEMRAKG 719
LIKSFC+EGL+SEALII SE+EK GVSSN IVYNT+MDAYCKSNRVEEAEGLFVEM+ KG
Sbjct: 337 LIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKG 396
Query: 720 IKPTAATFNILMHAYSRRMQPKIVENLLAEMQDAGLKPNAISYTCLISAYGRQKKMSDMA 899
IKPT ATFNILM+AYSR+MQP+IVE L+AEMQ+ GLKPNA SYTC+ISAYG+QK MSDMA
Sbjct: 397 IKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMA 456
Query: 900 ADAFLKMEKVGIKPTSQSYTALIHAYSISGWHEKAYLAFENMRREGLKPSIETYTTLLDA 1079
ADAFLKM+K GIKPTS SYTALIHAYS+SGWHEKAY AFENM+REG+KPSIETYT LLDA
Sbjct: 457 ADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDA 516
Query: 1080 FRRAGDAQTLMKIWKLMMSEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPT 1259
FRRAGD QTLMKIWKLM EKV GT VTFN LVDGFAK G Y EARDVIS+F VGL PT
Sbjct: 517 FRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLHPT 576
Query: 1260 VMTYNMLMNAYARRGQHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKHAFFCHK 1439
VMTYNMLMNAYAR G+HSKLP+LL EMAAHNLKPDSVTYSTMIYAF+ V+DF AFF H+
Sbjct: 577 VMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQ 636
Query: 1440 QMVKSGQVMDYSSYQKLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKRKKDEFWKYK 1619
+MVKSGQVMD SYQKLRA+L+ KA KNRKDR +++G++++KM ++K KRKKDE WKY+
Sbjct: 637 EMVKSGQVMDVDSYQKLRAVLDAKAAIKNRKDRRSMIGVVRNKMGVVKPKRKKDELWKYR 696
Query: 1620 KRHVKK 1637
KRHVK+
Sbjct: 697 KRHVKQ 702
>ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 851 bits (2198), Expect = 0.0
Identities = 425/545 (77%), Positives = 471/545 (86%)
Frame = +3
Query: 3 GEIVHLAKNLPQNLTLEEALAVYEGRVSEKXXXXXXXXXXXXXXXXXXXXXXYFFQWMRS 182
GEIV LA+NL QNLTLEEALA YEGRVSEK YFFQWMRS
Sbjct: 169 GEIVQLARNLTQNLTLEEALAEYEGRVSEKDCWEVLKLLGEEQLLVCCL---YFFQWMRS 225
Query: 183 QEPSLVTPRACTLLFPLLGRAKMGDKLMVLFRNLPSNKEFRDACVYNAAISGLLSSGRYE 362
QEPSLVTPRACT+LFPLLG+A+MGDKLM+LF NLPS +EFRD VYNAAISGLLSSGR E
Sbjct: 226 QEPSLVTPRACTVLFPLLGKARMGDKLMLLFTNLPSGREFRDVHVYNAAISGLLSSGRCE 285
Query: 363 DAWKVYESMEKDDIHPDHVTCTIMITVMRKLGHSAKDAWQFFEKMNTKGVGWSEEVLGAL 542
DAWKVYESME D++ PDHVTC+IM+ VMRKLGHSAKDAWQFFEKMN KGV W EEVLGAL
Sbjct: 286 DAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGAL 345
Query: 543 IKSFCIEGLLSEALIIQSEMEKNGVSSNAIVYNTMMDAYCKSNRVEEAEGLFVEMRAKGI 722
IKSFC+EGL+SEALII SE+EK GVSSNAIVYNT+MDAYCKSNRVEEAEGLF+EM+ KGI
Sbjct: 346 IKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKGI 405
Query: 723 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDAGLKPNAISYTCLISAYGRQKKMSDMAA 902
K T ATFNILM+AYSR+MQP+IVE L+AEMQDAGLKPNA SYTCLISAYG+QK MSDMAA
Sbjct: 406 KHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAA 465
Query: 903 DAFLKMEKVGIKPTSQSYTALIHAYSISGWHEKAYLAFENMRREGLKPSIETYTTLLDAF 1082
DAFLKM+K GIKPTS SYTALIHAYS+SGWHEKAY AFENM+REG+KPSIETYT LLDAF
Sbjct: 466 DAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAF 525
Query: 1083 RRAGDAQTLMKIWKLMMSEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTV 1262
RRAGD QTLMKIWKLM KV GT VTFN LVDGFAK G Y EARDVIS+F VGL PTV
Sbjct: 526 RRAGDTQTLMKIWKLMRRYKVEGTRVTFNTLVDGFAKHGHYKEARDVISKFANVGLHPTV 585
Query: 1263 MTYNMLMNAYARRGQHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKHAFFCHKQ 1442
MTYNMLMNAYAR GQHSKLP+LL EMAAHNLKPDSVTYSTMIYAF+ V+DF AFF H++
Sbjct: 586 MTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQE 645
Query: 1443 MVKSGQVMDYSSYQKLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKRKKDEFWKYKK 1622
MVKSGQV+D++SYQKLRA+L+ KA KNRKDR +L+G++++KM ++K KRKKDE WKY+K
Sbjct: 646 MVKSGQVIDFNSYQKLRAILDAKAAIKNRKDRRSLIGVVRNKMGVVKPKRKKDELWKYRK 705
Query: 1623 RHVKK 1637
RHVK+
Sbjct: 706 RHVKQ 710
>ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 691
Score = 834 bits (2155), Expect = 0.0
Identities = 419/538 (77%), Positives = 461/538 (85%)
Frame = +3
Query: 6 EIVHLAKNLPQNLTLEEALAVYEGRVSEKXXXXXXXXXXXXXXXXXXXXXXYFFQWMRSQ 185
EI+HLA+NLPQNLTLEEAL Y+ RVSEK Y FQWMRSQ
Sbjct: 150 EILHLARNLPQNLTLEEALEEYDKRVSEKECLKVMEILGEEQLVVCCL---YLFQWMRSQ 206
Query: 186 EPSLVTPRACTLLFPLLGRAKMGDKLMVLFRNLPSNKEFRDACVYNAAISGLLSSGRYED 365
EPSLVTP+ T LFPLLGRA+MGDKLMVLFRNLPS+KEFR+ VYNAAISGLL GRY+D
Sbjct: 207 EPSLVTPKVYTTLFPLLGRARMGDKLMVLFRNLPSSKEFRNVRVYNAAISGLLYDGRYKD 266
Query: 366 AWKVYESMEKDDIHPDHVTCTIMITVMRKLGHSAKDAWQFFEKMNTKGVGWSEEVLGALI 545
AWKVYESME D + PDHVTC+IMI MRKLGHSAKDAWQFFEKMN KGV W +E GALI
Sbjct: 267 AWKVYESMETDGVLPDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWGKEAFGALI 326
Query: 546 KSFCIEGLLSEALIIQSEMEKNGVSSNAIVYNTMMDAYCKSNRVEEAEGLFVEMRAKGIK 725
KSFC+EGLLSEALIIQSEMEK G+SSNAIVYNT+MDAYCKSNRVEEAEGLFVEM+AKGIK
Sbjct: 327 KSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIK 386
Query: 726 PTAATFNILMHAYSRRMQPKIVENLLAEMQDAGLKPNAISYTCLISAYGRQKKMSDMAAD 905
PTA TFNILM+AYSRRMQPKIVE+LLAEM+D GLKPNA SYTCLISAYGRQKKMSDMAAD
Sbjct: 387 PTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSDMAAD 446
Query: 906 AFLKMEKVGIKPTSQSYTALIHAYSISGWHEKAYLAFENMRREGLKPSIETYTTLLDAFR 1085
AFLKM+KVGIKPTS SYTA+IHAYS+SGWHEKAY FENM REG+KPSIETYTTLLDAFR
Sbjct: 447 AFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFR 506
Query: 1086 RAGDAQTLMKIWKLMMSEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTVM 1265
R GD +TLMKIWKLMMSEKV GT VTFNILVDGFAKQG +MEARDVISEFGK+GLQPTVM
Sbjct: 507 RVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQPTVM 566
Query: 1266 TYNMLMNAYARRGQHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKHAFFCHKQM 1445
TYNML+NAYAR G S +PQLL EM A L+PDS+TYST+IYAFV V+DFK AFF HK+M
Sbjct: 567 TYNMLINAYARGGLDSNIPQLLKEMEALRLRPDSITYSTVIYAFVRVRDFKRAFFYHKEM 626
Query: 1446 VKSGQVMDYSSYQKLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKRKKDEFWKYK 1619
VKSG VMD SSY+KLRA+L+VK +KN+ D++A+ GII +M MK+KRKKDEFWKYK
Sbjct: 627 VKSGYVMDISSYRKLRAILDVKVADKNKSDKVAMYGIINKQMGFMKNKRKKDEFWKYK 684
>ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 814 bits (2102), Expect = 0.0
Identities = 417/546 (76%), Positives = 464/546 (84%), Gaps = 1/546 (0%)
Frame = +3
Query: 3 GEIVHLAKNLPQNLTLEEALAVYEGRVSEKXXXXXXXXXXXXXXXXXXXXXXYFFQWMRS 182
GEIV LA+NLPQNLTLEEALA YEGR SEK FFQWM
Sbjct: 150 GEIVELARNLPQNLTLEEALAEYEGRFSEKECWEVLEILGEEHLLLCCVC---FFQWMSL 206
Query: 183 QEPSLVTPRACTLLFPLLGRAKMGDKLMVLFRNLPSNKEFRDACVYNAAISGLLSSGRYE 362
QEPSLVTPRACT+LFPLLG+ MGD++M LFRNLPS+ EFRD VYNA ISGLLSSGR E
Sbjct: 207 QEPSLVTPRACTVLFPLLGKGGMGDEVMDLFRNLPSSNEFRDVHVYNATISGLLSSGRSE 266
Query: 363 DAWKVYESMEKDDIHPDHVTCTIMITVMRKLGHSAKDAWQFFEKMNTKGVGWSEEVLGAL 542
DAWKVYESME ++IHPDH+TC+IM+TVMR+LGHSAKDAWQFFEKMN KGV WSEEVLGAL
Sbjct: 267 DAWKVYESMETENIHPDHMTCSIMVTVMRELGHSAKDAWQFFEKMNRKGVRWSEEVLGAL 326
Query: 543 IKSFCIEGLLSEALIIQSEMEKNGVSSNAIVYNTMMDAYCKSNRVEEAEGLFVEMRAKGI 722
I SFC+EGL +ALIIQSEMEK GVSS+AIVYNT+MDA+CKSN +E AEGLFVEM+AKGI
Sbjct: 327 INSFCVEGLRRQALIIQSEMEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEMKAKGI 386
Query: 723 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDAGLKPNAISYTCLISAYGRQKKMSDM-A 899
KP AAT+NILMHAYSRRMQPKIVE LL EMQD GLKPNA SYTCLI AYG+QK MSDM A
Sbjct: 387 KPIAATYNILMHAYSRRMQPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAA 446
Query: 900 ADAFLKMEKVGIKPTSQSYTALIHAYSISGWHEKAYLAFENMRREGLKPSIETYTTLLDA 1079
ADAFLKM+KVG+KPTSQSYTALIHAYS+SG HEKAY AFENM+ EG+KPSIETYTTLL+A
Sbjct: 447 ADAFLKMKKVGVKPTSQSYTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIETYTTLLNA 506
Query: 1080 FRRAGDAQTLMKIWKLMMSEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPT 1259
FR AGDAQTLM+IWKLM+SEKV GT TFNILVDGFAKQG +MEAR+VISEFGKVGL+PT
Sbjct: 507 FRHAGDAQTLMEIWKLMISEKVEGTGATFNILVDGFAKQGLFMEAREVISEFGKVGLKPT 566
Query: 1260 VMTYNMLMNAYARRGQHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKHAFFCHK 1439
V+TYNML+NAYAR GQHSKLPQLL EMA LKPDSVTYSTMI+AFV V+DF+ AFF HK
Sbjct: 567 VVTYNMLINAYARGGQHSKLPQLLKEMAVLKLKPDSVTYSTMIFAFVRVRDFRRAFFYHK 626
Query: 1440 QMVKSGQVMDYSSYQKLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKRKKDEFWKYK 1619
QM+KSGQ+MD SYQ L+ALLE + KN KD +LLGIIKSKM + K +R+KDEFWK+K
Sbjct: 627 QMIKSGQMMDGGSYQTLQALLETRPARKN-KDWSSLLGIIKSKMGV-KVRRQKDEFWKFK 684
Query: 1620 KRHVKK 1637
KRHV+K
Sbjct: 685 KRHVRK 690
>emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 800 bits (2067), Expect = 0.0
Identities = 402/548 (73%), Positives = 456/548 (83%), Gaps = 3/548 (0%)
Frame = +3
Query: 3 GEIVHLAKNLPQNLTLEEALAVYEGRVSEKXXXXXXXXXXXXXXXXXXXXXXYFFQWMRS 182
GEI+H A+NLP+N TL E L Y GRV E+ YFF+WM
Sbjct: 143 GEILHFARNLPENSTLGEVLGPYVGRVGERECVEVLGLMCEEDLVMGCL---YFFEWMGL 199
Query: 183 QEPSLVTPRACTLLFPLLGRAKMGDKLMVLFRNLPSNKEFRDACVYNAAISGLLSSGRYE 362
QEPSLVT RAC+LLFP+LGRA MGD LMVL RNLP ++FRD +YN+AISGL S GRY+
Sbjct: 200 QEPSLVTARACSLLFPMLGRAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYD 259
Query: 363 DAWKVYESMEKDDIHPDHVTCTIMITVMRKLGHSAKDAWQFFEKMNTKGVGWSEEVLGAL 542
DAWKVY+ ME ++I PDHVTC+IMITVMRK GHSAKDAW+FF++MN KGV WS EVLGAL
Sbjct: 260 DAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGAL 319
Query: 543 IKSFCIEGLLSEALIIQSEMEKNGVSSNAIVYNTMMDAYCKSNRVEEAEGLFVEMRAKGI 722
IKSFC EGL +EALIIQSEMEK G+SSNAIVYNT+MDAY KSNRVEEAEGLF EM+AKG+
Sbjct: 320 IKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGV 379
Query: 723 KPTAATFNILMHAYSRRMQPKIVENLLAEMQDAGLKPNAISYTCLISAYGRQKKMSDMAA 902
PT+AT+NILM AYSRRMQP+I+ENLL EMQD GL+PN SYTCLISAYGRQKKMSDMAA
Sbjct: 380 MPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAA 439
Query: 903 DAFLKMEKVGIKPTSQSYTALIHAYSISGWHEKAYLAFENMRREGLKPSIETYTTLLDAF 1082
DAFL+M+KVGIKPTS SYTALIHAYS+ GWHEKAY AFENM+REG+KPSIETYT LLDAF
Sbjct: 440 DAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAF 499
Query: 1083 RRAGDAQTLMKIWKLMMSEKVVGTPVTFNILVDGFAKQGQYMEARDVISEFGKVGLQPTV 1262
RRAGD QTLMKIWKLM+S+K+ GT VTFNIL+DGFAKQG YMEARDVI EFGK+G QPTV
Sbjct: 500 RRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTV 559
Query: 1263 MTYNMLMNAYARRGQHSKLPQLLNEMAAHNLKPDSVTYSTMIYAFVCVQDFKHAFFCHKQ 1442
MTYNMLMNAYAR GQHS+LPQLL EM + NLKPDS+TYSTMIYA+V V+DFK AFF HKQ
Sbjct: 560 MTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFYHKQ 619
Query: 1443 MVKSGQVMDYSSYQKLRALLEVKAGEKNRKDRIALLGIIKSKMLIMKDKR-KKDEFWKYK 1619
MVKSGQV D SYQKLR++L+VKA KNRKDR A+LGI+ S M ++K K+ KKDEFWK K
Sbjct: 620 MVKSGQVPDPQSYQKLRSILDVKAATKNRKDRSAILGIVNSNMGLLKPKKGKKDEFWKNK 679
Query: 1620 K--RHVKK 1637
K R ++K
Sbjct: 680 KGQRRIQK 687