BLASTX nr result

ID: Glycyrrhiza23_contig00021183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021183
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520541.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   135   1e-29
ref|XP_003625295.1| Ubiquitin ligase SINAT3 [Medicago truncatula...   126   5e-27
ref|NP_001240996.1| uncharacterized protein LOC100813966 [Glycin...   124   2e-26
gb|ACU14801.1| unknown [Glycine max]                                  124   2e-26
emb|CCG06552.1| E3 ubiquitin ligase-like protein [Lotus japonicus]    123   3e-26

>ref|XP_003520541.1| PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Glycine max]
          Length = 374

 Score =  135 bits (339), Expect = 1e-29
 Identities = 65/80 (81%), Positives = 72/80 (90%)
 Frame = +2

Query: 440 KDKYFRSGTAMAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKSSVGLNGKNGIS 619
           + KY RSG AMAPG SVFKEVLESHL+SSDYE GKAK EAKSNST TKSS+GL+GK+GIS
Sbjct: 56  RKKYCRSGLAMAPGSSVFKEVLESHLMSSDYEMGKAKSEAKSNSTSTKSSIGLSGKSGIS 115

Query: 620 SKNGVHDLLGCPVCKNLMYP 679
           S NGV++LLGCPVCKNLMYP
Sbjct: 116 SNNGVYELLGCPVCKNLMYP 135


>ref|XP_003625295.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|355500310|gb|AES81513.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 310

 Score =  126 bits (316), Expect = 5e-27
 Identities = 62/71 (87%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
 Frame = +2

Query: 470 MAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKS-SVGLNGKNGISSKNGVHDLL 646
           MAPGG +FKEVLESHLL+SDYETGKAK EAK NST TKS SVGLNGK+G SSKNGVHDLL
Sbjct: 1   MAPGGGIFKEVLESHLLTSDYETGKAKSEAKINSTLTKSTSVGLNGKHGTSSKNGVHDLL 60

Query: 647 GCPVCKNLMYP 679
           GCPVCKNLMYP
Sbjct: 61  GCPVCKNLMYP 71


>ref|NP_001240996.1| uncharacterized protein LOC100813966 [Glycine max]
           gi|255646961|gb|ACU23950.1| unknown [Glycine max]
          Length = 309

 Score =  124 bits (311), Expect = 2e-26
 Identities = 60/70 (85%), Positives = 65/70 (92%)
 Frame = +2

Query: 470 MAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKSSVGLNGKNGISSKNGVHDLLG 649
           MAPG SVFKEVLESHL+SSDYETGKAK EAKSN T TKSSVGL+GK+GISS NGV++LLG
Sbjct: 1   MAPGSSVFKEVLESHLMSSDYETGKAKSEAKSNITSTKSSVGLSGKSGISSNNGVYELLG 60

Query: 650 CPVCKNLMYP 679
           CPVCKNLMYP
Sbjct: 61  CPVCKNLMYP 70


>gb|ACU14801.1| unknown [Glycine max]
          Length = 213

 Score =  124 bits (310), Expect = 2e-26
 Identities = 59/70 (84%), Positives = 65/70 (92%)
 Frame = +2

Query: 470 MAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKSSVGLNGKNGISSKNGVHDLLG 649
           MAPG SVFKEVLESHL+SSDYE GKAK EAKSNST TKSS+GL+GK+GISS NGV++LLG
Sbjct: 1   MAPGSSVFKEVLESHLMSSDYEMGKAKSEAKSNSTSTKSSIGLSGKSGISSNNGVYELLG 60

Query: 650 CPVCKNLMYP 679
           CPVCKNLMYP
Sbjct: 61  CPVCKNLMYP 70


>emb|CCG06552.1| E3 ubiquitin ligase-like protein [Lotus japonicus]
          Length = 309

 Score =  123 bits (309), Expect = 3e-26
 Identities = 61/70 (87%), Positives = 63/70 (90%)
 Frame = +2

Query: 470 MAPGGSVFKEVLESHLLSSDYETGKAKFEAKSNSTFTKSSVGLNGKNGISSKNGVHDLLG 649
           MAPGG VFKEVLESHLLSSDYETGKAK EAKS+STF KSSVG  GKN ISSKNGV+DLL 
Sbjct: 1   MAPGGGVFKEVLESHLLSSDYETGKAKSEAKSSSTFPKSSVGSTGKNEISSKNGVYDLLK 60

Query: 650 CPVCKNLMYP 679
           CPVCKNLMYP
Sbjct: 61  CPVCKNLMYP 70


Top