BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021150
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    93   3e-17
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/93 (62%), Positives = 75/93 (80%)
 Frame = -3

Query: 281 LSQRRIEDAYKLLVDMVLNNRASPQQGTYEELIENLLGIGKFEEALDLLCLMRKHKYPPL 102
           L Q+RI+DAYKLLV++V  +  SP+ GTY +LI+NLLGIGK EEALDL CLMR H++ P+
Sbjct: 491 LGQKRIDDAYKLLVEIVSKHGTSPRHGTYAKLIDNLLGIGKLEEALDLHCLMRNHEFTPI 550

Query: 101 NQPVVRYISKSGTVEDAEKFLKAWSTGSPQSHS 3
            +P V+YISK G++EDA KFLK  S G+P+SHS
Sbjct: 551 IEPFVQYISKFGSIEDAIKFLK--SKGTPRSHS 581


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/92 (59%), Positives = 67/92 (72%)
 Frame = -3

Query: 281 LSQRRIEDAYKLLVDMVLNNRASPQQGTYEELIENLLGIGKFEEALDLLCLMRKHKYPPL 102
           LSQ+RIE AY+L+ ++    R SP Q TY++LIE LLG+ KFEEAL+LL LM+ H YPP 
Sbjct: 487 LSQKRIEGAYELVAEISRKCRISPWQATYKKLIEKLLGVMKFEEALELLRLMKSHNYPPY 546

Query: 101 NQPVVRYISKSGTVEDAEKFLKAWSTGSPQSH 6
           + P V YISK G+VEDAE FLKA S  S  SH
Sbjct: 547 HLPFVPYISKFGSVEDAEAFLKALSVKSYPSH 578


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/93 (53%), Positives = 62/93 (66%)
 Frame = -3

Query: 281 LSQRRIEDAYKLLVDMVLNNRASPQQGTYEELIENLLGIGKFEEALDLLCLMRKHKYPPL 102
           LSQ+RI+ AYKLLV+MV      P Q TY+ +I  LLG+ K EEA++LL LM+K  YPP 
Sbjct: 488 LSQKRIDGAYKLLVEMVNTAHLVPWQATYKLMINKLLGVRKLEEAINLLHLMKKQNYPPF 547

Query: 101 NQPVVRYISKSGTVEDAEKFLKAWSTGSPQSHS 3
            +P + YISK GTVEDA +FL A S     S S
Sbjct: 548 PEPFIEYISKFGTVEDAGEFLNALSAKKYPSQS 580


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = -3

Query: 281 LSQRRIEDAYKLLVDMVLNNRASPQQGTYEELIENLLGIGKFEEALDLLCLMRKHKYPPL 102
           LSQ+RI+ AY L +DMV   R  P Q TY+ LIE LL + K EEAL+LL LM++H +PP 
Sbjct: 486 LSQKRIDGAYTLFMDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPPF 545

Query: 101 NQPVVRYISKSGTVEDAEKFLKAWS 27
            +P V+YIS+ GTV+DA  FLKA S
Sbjct: 546 PEPFVQYISRFGTVDDAADFLKALS 570


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/85 (56%), Positives = 57/85 (67%)
 Frame = -3

Query: 281 LSQRRIEDAYKLLVDMVLNNRASPQQGTYEELIENLLGIGKFEEALDLLCLMRKHKYPPL 102
           LSQR+++ AY  LV+MV   R  P Q TY+ LIE LL + K EEA DLL LM+KH YPP 
Sbjct: 335 LSQRKMDGAYTFLVEMVNKLRLVPWQATYKLLIEKLLQVRKLEEATDLLRLMKKHNYPPF 394

Query: 101 NQPVVRYISKSGTVEDAEKFLKAWS 27
            +P  +YISK GTVEDA  F K  S
Sbjct: 395 PEPFDQYISKFGTVEDAVNFFKVLS 419