BLASTX nr result

ID: Glycyrrhiza23_contig00021136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021136
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   248   1e-63
ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   247   2e-63
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   226   4e-57
emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]   212   6e-53
ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   212   7e-53

>ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1197

 Score =  248 bits (632), Expect = 1e-63
 Identities = 123/151 (81%), Positives = 135/151 (89%), Gaps = 3/151 (1%)
 Frame = -2

Query: 723  EDTPQPNTKIEEPKLLGFNSGSNEKVLLKSGPYGFYVQLGEDRKGYIPKRASLSHIKDVD 544
            ED  QPNT+IEEPKLLG  SGSNEKVLLKSGPYG YVQLGEDRKGYIP+RAS+SHIKDVD
Sbjct: 1047 EDASQPNTRIEEPKLLGVTSGSNEKVLLKSGPYGVYVQLGEDRKGYIPRRASVSHIKDVD 1106

Query: 543  SVTLEDALELLQYPLTLGNHPKDGQPVILKVARVGFCVRHRHTIASVPKNMKPSDVTFEK 364
            S+TL+DALE+LQYPLTLGNHPKDGQPVIL++AR GFCVRHR TIAS+PKN+KPSDVT EK
Sbjct: 1107 SITLKDALEVLQYPLTLGNHPKDGQPVILRLARAGFCVRHRRTIASIPKNVKPSDVTLEK 1166

Query: 363  ALELLSGKDVRRCGRP-KGKNK--AEAVEAF 280
            ALE LSG DVRR GRP KGK+K   E +EAF
Sbjct: 1167 ALEYLSGDDVRRSGRPKKGKSKVEVEVIEAF 1197


>ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1070

 Score =  247 bits (631), Expect = 2e-63
 Identities = 119/146 (81%), Positives = 131/146 (89%)
 Frame = -2

Query: 723  EDTPQPNTKIEEPKLLGFNSGSNEKVLLKSGPYGFYVQLGEDRKGYIPKRASLSHIKDVD 544
            ED  QPN+++EEPKLLG  SGS EKVLLKSGPYG YVQLGEDRKGYIPKRAS+SHIKDVD
Sbjct: 920  EDASQPNSRVEEPKLLGVTSGSYEKVLLKSGPYGVYVQLGEDRKGYIPKRASVSHIKDVD 979

Query: 543  SVTLEDALELLQYPLTLGNHPKDGQPVILKVARVGFCVRHRHTIASVPKNMKPSDVTFEK 364
            S+TL+DALE+LQYPLTLGNHPKDGQPVILK+AR G CVRHR T+ASVPKN+KPSDVT EK
Sbjct: 980  SITLKDALEVLQYPLTLGNHPKDGQPVILKLARAGLCVRHRRTVASVPKNVKPSDVTLEK 1039

Query: 363  ALELLSGKDVRRCGRPKGKNKAEAVE 286
            ALE LSG DVRR GRPKGK+K + VE
Sbjct: 1040 ALEYLSGDDVRRSGRPKGKSKVQEVE 1065


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223532629|gb|EEF34415.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  226 bits (576), Expect = 4e-57
 Identities = 111/145 (76%), Positives = 126/145 (86%)
 Frame = -2

Query: 723  EDTPQPNTKIEEPKLLGFNSGSNEKVLLKSGPYGFYVQLGEDRKGYIPKRASLSHIKDVD 544
            E+TPQ N  +EEPKLLG +  S EKVLLK+GPYGFY+QLGEDRKGY PKRAS+SHIKDVD
Sbjct: 924  EETPQ-NNSVEEPKLLGVHPVSTEKVLLKNGPYGFYLQLGEDRKGYTPKRASVSHIKDVD 982

Query: 543  SVTLEDALELLQYPLTLGNHPKDGQPVILKVARVGFCVRHRHTIASVPKNMKPSDVTFEK 364
            ++TLEDALELL+YP+TLGNHPKDG P+ILK+A+VGF VRHR TIASVPKNMKP +V+ EK
Sbjct: 983  NITLEDALELLRYPVTLGNHPKDGHPIILKLAKVGFAVRHRRTIASVPKNMKPDNVSLEK 1042

Query: 363  ALELLSGKDVRRCGRPKGKNKAEAV 289
            ALELLSG DVRR GRPK K K E V
Sbjct: 1043 ALELLSGDDVRRSGRPKRKPKVEEV 1067


>emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]
          Length = 672

 Score =  212 bits (540), Expect = 6e-53
 Identities = 98/146 (67%), Positives = 123/146 (84%)
 Frame = -2

Query: 723 EDTPQPNTKIEEPKLLGFNSGSNEKVLLKSGPYGFYVQLGEDRKGYIPKRASLSHIKDVD 544
           E+    +   EEPK+LG + GS+EK+LLK+GPYGFY+QLGEDRKGY+PKRAS+SHIKDV 
Sbjct: 62  EEVASQDKTFEEPKVLGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLPKRASVSHIKDVG 121

Query: 543 SVTLEDALELLQYPLTLGNHPKDGQPVILKVARVGFCVRHRHTIASVPKNMKPSDVTFEK 364
           S+TLEDALELL+YP+TLGNHP D  PV+LK+A+ GF +RHR TIA VPKN+KP+D+T EK
Sbjct: 122 SITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPKNIKPNDITLEK 181

Query: 363 ALELLSGKDVRRCGRPKGKNKAEAVE 286
           AL+LL GKDV++ GRPK K K EA++
Sbjct: 182 ALKLLLGKDVKQSGRPKNKKKQEAMQ 207


>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  212 bits (539), Expect = 7e-53
 Identities = 99/147 (67%), Positives = 121/147 (82%)
 Frame = -2

Query: 723  EDTPQPNTKIEEPKLLGFNSGSNEKVLLKSGPYGFYVQLGEDRKGYIPKRASLSHIKDVD 544
            E+    +   EEPK LG + GS+EK+LLK+GPYGFY+QLGEDRKGY+PKRAS+SHIKDV 
Sbjct: 1038 EEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLPKRASVSHIKDVG 1097

Query: 543  SVTLEDALELLQYPLTLGNHPKDGQPVILKVARVGFCVRHRHTIASVPKNMKPSDVTFEK 364
            S+TLEDALELL+YP+TLGNHP D  PV+LK+A+ GF +RHR TIA VPKN+KP+D+T EK
Sbjct: 1098 SITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPKNIKPNDITLEK 1157

Query: 363  ALELLSGKDVRRCGRPKGKNKAEAVEA 283
            AL+LL GKDV++ GRPK K K E  EA
Sbjct: 1158 ALKLLLGKDVKQSGRPKNKKKQEVYEA 1184


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