BLASTX nr result

ID: Glycyrrhiza23_contig00021123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021123
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinu...   169   3e-40
ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   167   8e-40
ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   167   8e-40
ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein lig...   167   1e-39
ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39

>ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223544118|gb|EEF45643.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 393

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/83 (95%), Positives = 82/83 (98%)
 Frame = -3

Query: 271 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 92
           NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGF
Sbjct: 224 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283

Query: 91  GDSDKSSKMVPQRVQLLAGEDIV 23
           GD+DKSSKMVPQ+V LLAGEDIV
Sbjct: 284 GDNDKSSKMVPQKVNLLAGEDIV 306


>ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = -3

Query: 271 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 92
           NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD GEVYGWGRGEHGRLGF
Sbjct: 224 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGF 283

Query: 91  GDSDKSSKMVPQRVQLLAGEDIV 23
           GD+DKSSKMVPQ+VQLL+GE+IV
Sbjct: 284 GDNDKSSKMVPQKVQLLSGEEIV 306


>ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = -3

Query: 271 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 92
           NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD GEVYGWGRGEHGRLGF
Sbjct: 224 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGF 283

Query: 91  GDSDKSSKMVPQRVQLLAGEDIV 23
           GD+DKSSKMVPQ+VQLL+GE+IV
Sbjct: 284 GDNDKSSKMVPQKVQLLSGEEIV 306


>ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  167 bits (422), Expect = 1e-39
 Identities = 80/83 (96%), Positives = 81/83 (97%)
 Frame = -3

Query: 271 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 92
           NEYGQLGTGDTQPRSQPI VQGLS LTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF
Sbjct: 228 NEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 287

Query: 91  GDSDKSSKMVPQRVQLLAGEDIV 23
           GDSDKSSKMVPQ+VQLLAGEDIV
Sbjct: 288 GDSDKSSKMVPQKVQLLAGEDIV 310


>ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|222870779|gb|EEF07910.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/83 (93%), Positives = 80/83 (96%)
 Frame = -3

Query: 271 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 92
           NEYGQLGTGDTQPRSQPI VQGLSGLTLVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGF
Sbjct: 224 NEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283

Query: 91  GDSDKSSKMVPQRVQLLAGEDIV 23
           GD+DKSSKMVPQRV LL GEDIV
Sbjct: 284 GDNDKSSKMVPQRVNLLVGEDIV 306


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