BLASTX nr result

ID: Glycyrrhiza23_contig00021116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021116
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...    83   2e-14
ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1...    82   6e-14
ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...    81   8e-14
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...    78   7e-13
emb|CBI22162.3| unnamed protein product [Vitis vinifera]               78   7e-13

>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/65 (58%), Positives = 46/65 (70%)
 Frame = +2

Query: 8   QCLRGHNGPXXXXXXXXXXXXXXXXXASGGKDGTVRLWSLSSNGEQGQHALKATLHGHEK 187
           +C RGHNGP                 ASGG+DGTVRLWSLSS+G++GQHALKATL+GHEK
Sbjct: 195 RCFRGHNGPVLTLSDKLLGDGSAKVLASGGEDGTVRLWSLSSSGKRGQHALKATLYGHEK 254

Query: 188 PVNLI 202
           P+ L+
Sbjct: 255 PIKLM 259


>ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max]
          Length = 452

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/66 (59%), Positives = 46/66 (69%)
 Frame = +2

Query: 5   LQCLRGHNGPXXXXXXXXXXXXXXXXXASGGKDGTVRLWSLSSNGEQGQHALKATLHGHE 184
           L+C RGHNGP                 ASGG+DGTVRLWSL S+G++GQ ALKATL+GHE
Sbjct: 151 LRCFRGHNGPVLSLSNKLLGEDGRKVLASGGEDGTVRLWSLGSSGKRGQLALKATLYGHE 210

Query: 185 KPVNLI 202
           KPVNL+
Sbjct: 211 KPVNLM 216


>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/66 (57%), Positives = 45/66 (68%)
 Frame = +2

Query: 5   LQCLRGHNGPXXXXXXXXXXXXXXXXXASGGKDGTVRLWSLSSNGEQGQHALKATLHGHE 184
           L+C RGHNGP                 ASGG+DGTVRLWSL S+G++GQ ALKAT +GHE
Sbjct: 201 LRCFRGHNGPVLSLSNKLLGEDGSKVLASGGEDGTVRLWSLGSSGKRGQRALKATFYGHE 260

Query: 185 KPVNLI 202
           KPVNL+
Sbjct: 261 KPVNLM 266


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/65 (56%), Positives = 44/65 (67%)
 Frame = +2

Query: 8   QCLRGHNGPXXXXXXXXXXXXXXXXXASGGKDGTVRLWSLSSNGEQGQHALKATLHGHEK 187
           +C RGHNGP                 ASGG+DGTVRLWSLSS+G++GQ ALKATL+GH K
Sbjct: 191 RCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSSSGKRGQQALKATLYGHAK 250

Query: 188 PVNLI 202
           PV L+
Sbjct: 251 PVKLM 255


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/65 (56%), Positives = 44/65 (67%)
 Frame = +2

Query: 8   QCLRGHNGPXXXXXXXXXXXXXXXXXASGGKDGTVRLWSLSSNGEQGQHALKATLHGHEK 187
           +C RGHNGP                 ASGG+DGTVRLWSLSS+G++GQ ALKATL+GH K
Sbjct: 188 RCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSSSGKRGQQALKATLYGHAK 247

Query: 188 PVNLI 202
           PV L+
Sbjct: 248 PVKLM 252


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