BLASTX nr result
ID: Glycyrrhiza23_contig00021101
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00021101 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica... 192 3e-47 ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica... 187 8e-46 ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [M... 148 5e-34 ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu... 135 5e-30 ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2... 123 2e-26 >ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine max] Length = 1162 Score = 192 bits (487), Expect = 3e-47 Identities = 98/133 (73%), Positives = 107/133 (80%) Frame = +2 Query: 29 TMTRRREKKGDALQLHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVH 208 T +R +KKG+ L RQNP VDEVTRIRI+QILE FRAS DEVYKFDA LSNQERA VH Sbjct: 5 TKNKREKKKGEPL--FRQNPNVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERALVH 62 Query: 209 QLSQKMGLRSKSYGLGNERRVSVQKIKKKVDIDNEFDSLPHFMFSEESKRVLGDLFAHYP 388 Q++ KMG RSKSYGLG ERRV VQK+KKKVD DN F SLP F FS E+K VLGDLFAHYP Sbjct: 63 QMALKMGFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPQFTFSGEAKWVLGDLFAHYP 122 Query: 389 PGDGNLLETIGEN 427 PGDGN E +GEN Sbjct: 123 PGDGNSWEMVGEN 135 >ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine max] Length = 1164 Score = 187 bits (475), Expect = 8e-46 Identities = 96/127 (75%), Positives = 106/127 (83%) Frame = +2 Query: 47 EKKGDALQLHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKM 226 +KKG+ L RQNP VDEVTRI I+QILEQFRAS DEVYKFDAGLSNQERA VHQ++ KM Sbjct: 12 KKKGEPL--FRQNPNVDEVTRICISQILEQFRASNDEVYKFDAGLSNQERALVHQMALKM 69 Query: 227 GLRSKSYGLGNERRVSVQKIKKKVDIDNEFDSLPHFMFSEESKRVLGDLFAHYPPGDGNL 406 G RSKSYGLG ERRV VQK+KKKVD DN F SLP F FS E+K VLGDLFAH+PPG+GNL Sbjct: 70 GFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPPFTFSGEAKWVLGDLFAHHPPGEGNL 129 Query: 407 LETIGEN 427 E +GEN Sbjct: 130 WEMVGEN 136 >ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula] gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula] Length = 1190 Score = 148 bits (373), Expect = 5e-34 Identities = 71/131 (54%), Positives = 95/131 (72%) Frame = +2 Query: 32 MTRRREKKGDALQLHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQ 211 ++ ++ K + + Q K+DE TR RI + LE F++S +E YKF+AGLSN +R F H Sbjct: 4 VSNKKANKLARFKKYAQPTKIDESTRRRIIRTLESFQSSDEEEYKFEAGLSNDDRRFAHL 63 Query: 212 LSQKMGLRSKSYGLGNERRVSVQKIKKKVDIDNEFDSLPHFMFSEESKRVLGDLFAHYPP 391 L+QKMG +SKSYG G ERR+SV+K KK DN+ +LPHF FSEE+KR +GDLFAH+PP Sbjct: 64 LAQKMGFKSKSYGTGKERRLSVRKGNKKGGSDNQSANLPHFTFSEEAKRAMGDLFAHFPP 123 Query: 392 GDGNLLETIGE 424 GDGNL + +GE Sbjct: 124 GDGNLKDMVGE 134 >ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1229 Score = 135 bits (339), Expect = 5e-30 Identities = 69/125 (55%), Positives = 94/125 (75%) Frame = +2 Query: 32 MTRRREKKGDALQLHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQ 211 M ++R+KK + + NP V E TRIRI+QILEQFRA+KD+V+ F+A LSN+ERA VH+ Sbjct: 1 MGKKRQKKAE-----QGNPNVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHE 55 Query: 212 LSQKMGLRSKSYGLGNERRVSVQKIKKKVDIDNEFDSLPHFMFSEESKRVLGDLFAHYPP 391 + +K+G++SKS G G++RRVS+ KI +K D N +SL + FSEESK VL +LFA+YPP Sbjct: 56 VCKKLGMKSKSTGRGHQRRVSIYKIIQKADTGNGKESLTNLTFSEESKLVLQELFAYYPP 115 Query: 392 GDGNL 406 DG L Sbjct: 116 EDGEL 120 >ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1| predicted protein [Populus trichocarpa] Length = 1195 Score = 123 bits (308), Expect = 2e-26 Identities = 62/117 (52%), Positives = 84/117 (71%) Frame = +2 Query: 50 KKGDALQLHRQNPKVDEVTRIRITQILEQFRASKDEVYKFDAGLSNQERAFVHQLSQKMG 229 KK +QNP+V E T IRI++ILE+FRA+ D+VY F+A LSN +RA VH++ +KMG Sbjct: 3 KKNQRKAAQQQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMG 62 Query: 230 LRSKSYGLGNERRVSVQKIKKKVDIDNEFDSLPHFMFSEESKRVLGDLFAHYPPGDG 400 ++SKS G G +RRVSV K KK+D ++L H FS ESK VLG+LF++YPP +G Sbjct: 63 MKSKSSGRGGQRRVSVYKNTKKLDDVKGKENLTHLTFSGESKMVLGELFSNYPPEEG 119