BLASTX nr result

ID: Glycyrrhiza23_contig00021092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021092
         (1316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-...   322   2e-85
ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]             321   3e-85
ref|XP_003608503.1| Pre-rRNA-processing protein ESF1 [Medicago t...   297   4e-78
ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [...   226   1e-56
ref|XP_002327731.1| predicted protein [Populus trichocarpa] gi|2...   217   6e-54

>ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-like [Glycine max]
          Length = 696

 Score =  322 bits (824), Expect = 2e-85
 Identities = 188/346 (54%), Positives = 216/346 (62%)
 Frame = +3

Query: 3    TLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXLLVSGNGS 182
            TLK+K  D+QLAQ+E+ EFL                  QP            LL +G+ S
Sbjct: 357  TLKQKFTDDQLAQMEVKEFLTSDESESDDSKDNNETDDQPDKRAKKRAKYRALLQAGDDS 416

Query: 183  DEEDAEHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXXXY 362
            D  + EH +VQ+MEVTFNTGLED+SKHIMEKKDKKSETVW+A+L               Y
Sbjct: 417  DGGN-EHDNVQNMEVTFNTGLEDLSKHIMEKKDKKSETVWDAHLRKKCEKKKTRKNKRKY 475

Query: 363  XXXXXXXXXXXXXXXXXXXXXFFIEEPAAKKRKNEQNKNDKDHELKDRDGVDKASKXXXX 542
                                 FFIEEPA KKRK  +N   KD E K+ +G+D+ASK    
Sbjct: 476  -SSDDDDSDDTDQEATEEADDFFIEEPAVKKRKKLEN---KDEEPKEMNGLDEASKEELE 531

Query: 543  XXXADDKGTEAALXXXXXXXXXXXXXXXXXAIDEGKIPNSAYDDSRFAALVSPDYAIDPT 722
               ADDKGT+  L                 +IDE KIP++AYDD RF+AL SPDYAIDPT
Sbjct: 532  LLLADDKGTDTGLKGYNLKFKKGKGKRTENSIDEEKIPSNAYDDPRFSALFSPDYAIDPT 591

Query: 723  DPQFKRSAVYARQLAQKQQKGHMELSAERENTKLPKGTQLSADDSGMMQKGEEEGLDLLK 902
            +PQFKRSA YARQLAQKQQK + +  AERE TK+ KG QLS DDSGMM+KGEEE LD LK
Sbjct: 592  NPQFKRSATYARQLAQKQQKDNADPPAEREPTKV-KGMQLSFDDSGMMKKGEEERLDALK 650

Query: 903  SKKDKYELSSLVKSIKMKSKQIQLPSDGKTRKDGKSQFKGMGKKRH 1040
            S KDKYELSSLVKSIKMKSKQ+QLPSD KT KDGKS  KGM KKRH
Sbjct: 651  STKDKYELSSLVKSIKMKSKQVQLPSDDKTMKDGKSHIKGMKKKRH 696


>ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]
          Length = 695

 Score =  321 bits (822), Expect = 3e-85
 Identities = 190/347 (54%), Positives = 216/347 (62%), Gaps = 1/347 (0%)
 Frame = +3

Query: 3    TLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXLLVSGNGS 182
            TL RKL DEQLA+ E+ EFL                  QP            LL SG+ S
Sbjct: 353  TLNRKLTDEQLAEFEVKEFLTSDESESDDSKDNNETDDQPDKMAKKRAKYRALLQSGDDS 412

Query: 183  DEEDAEHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXXXY 362
            D  + EH + Q+MEVTFNTGLED+SK+IMEKKDKKSETVW+AYL               Y
Sbjct: 413  DGGN-EHDNAQNMEVTFNTGLEDLSKYIMEKKDKKSETVWDAYLSKKSEKKKAGKNKRKY 471

Query: 363  XXXXXXXXXXXXXXXXXXXXXFFIEEPAAKKRKNEQNKNDKDHELKDRDGVDKASKXXXX 542
                                 FFIEEPAAKKRK  QNK D++   ++ DG+DKASK    
Sbjct: 472  -SSDDDDSDDTDQEATEEADDFFIEEPAAKKRKKPQNKEDEEQRHEEIDGLDKASKEELE 530

Query: 543  XXXADDKGTEAAL-XXXXXXXXXXXXXXXXXAIDEGKIPNSAYDDSRFAALVSPDYAIDP 719
               ADDKGT+  +                   IDE KIP++AY+D RF+AL SP+YAIDP
Sbjct: 531  LLLADDKGTDTGVKGYNLKFKKGKGKKRRENDIDEEKIPSNAYNDPRFSALFSPNYAIDP 590

Query: 720  TDPQFKRSAVYARQLAQKQQKGHMELSAERENTKLPKGTQLSADDSGMMQKGEEEGLDLL 899
            TDPQFKRSA YARQLAQKQQK + +   ERE TKL KGTQLS++DSG M K EEEGLD L
Sbjct: 591  TDPQFKRSATYARQLAQKQQKDNADPPVEREPTKL-KGTQLSSEDSGRM-KDEEEGLDAL 648

Query: 900  KSKKDKYELSSLVKSIKMKSKQIQLPSDGKTRKDGKSQFKGMGKKRH 1040
            KSKKDKYELSSLVKSIKMKSKQ+QLPSD KTRKDGKS  KGM KKRH
Sbjct: 649  KSKKDKYELSSLVKSIKMKSKQVQLPSDNKTRKDGKSYIKGMKKKRH 695


>ref|XP_003608503.1| Pre-rRNA-processing protein ESF1 [Medicago truncatula]
            gi|355509558|gb|AES90700.1| Pre-rRNA-processing protein
            ESF1 [Medicago truncatula]
          Length = 737

 Score =  297 bits (761), Expect = 4e-78
 Identities = 179/347 (51%), Positives = 205/347 (59%), Gaps = 1/347 (0%)
 Frame = +3

Query: 3    TLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXLLVSGNGS 182
            TLKRK  DEQLAQLE++E +                  +P            L +  N S
Sbjct: 401  TLKRKFTDEQLAQLEMDELIASDVSDSDDSEDNNETDERPRKKDNKY-----LALLDNNS 455

Query: 183  DEEDAEHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXXXY 362
            DE+  +  D  DMEVTFNTGL+DISKHIMEKKDKKS TVWE  L               +
Sbjct: 456  DEDGDD--DAMDMEVTFNTGLQDISKHIMEKKDKKSRTVWEECLRKKREKKKARKNKSKH 513

Query: 363  XXXXXXXXXXXXXXXXXXXXXFFIEEPAAKKRKNE-QNKNDKDHELKDRDGVDKASKXXX 539
                                 F  EEP  KK+K + ++KNDKDH+L+D DGV KASK   
Sbjct: 514  SSSDDDSDNTDHEATEDADDFFIDEEPDIKKKKKKAESKNDKDHKLQDMDGVAKASKEEL 573

Query: 540  XXXXADDKGTEAALXXXXXXXXXXXXXXXXXAIDEGKIPNSAYDDSRFAALVSPDYAIDP 719
                ADDKGT   L                 AIDEGKIPN+A+DD RFA++ S D+AIDP
Sbjct: 574  ELLLADDKGTGTGLKGYNLKFKKGKGKKAENAIDEGKIPNNAFDDPRFASIFSADFAIDP 633

Query: 720  TDPQFKRSAVYARQLAQKQQKGHMELSAERENTKLPKGTQLSADDSGMMQKGEEEGLDLL 899
            TDPQFKRSAVYARQLAQKQQKG  ELS ERE+ K PK TQLS+D SG   KG EE  D L
Sbjct: 634  TDPQFKRSAVYARQLAQKQQKGREELSVEREHVKFPKETQLSSDGSGAKLKGGEEVSDDL 693

Query: 900  KSKKDKYELSSLVKSIKMKSKQIQLPSDGKTRKDGKSQFKGMGKKRH 1040
            KSK+DK ELSSLVKSIKMKSKQIQL SD  T+K GKSQFK   K++H
Sbjct: 694  KSKQDKLELSSLVKSIKMKSKQIQLSSDVNTKKAGKSQFK---KRKH 737


>ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
            gi|223525944|gb|EEF28341.1| Pre-rRNA-processing protein
            ESF1, putative [Ricinus communis]
          Length = 722

 Score =  226 bits (576), Expect = 1e-56
 Identities = 144/342 (42%), Positives = 185/342 (54%), Gaps = 3/342 (0%)
 Frame = +3

Query: 3    TLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXLLVSGNGS 182
            TLKRK   +QLA++EL EFL                  +             L+ SG+GS
Sbjct: 368  TLKRKFTADQLAEMELQEFLASDGSESDDDGNDDNAEGEADRKEKKRDKYRALIQSGDGS 427

Query: 183  DEEDAEHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXXXY 362
            D ED E G  Q+ME+TFNTGLE +SK I+EK+DKKSETVWEA+L               Y
Sbjct: 428  DGEDEEEG--QEMEITFNTGLEGLSKRILEKRDKKSETVWEAHLRKQQEKKKARKKRSKY 485

Query: 363  XXXXXXXXXXXXXXXXXXXXXFFIEEPAAKK-RKNEQNKNDKDH-ELKDRDGVDKASKXX 536
                                 FF+EEP+ KK +K+ Q K +K+  +L D D   +ASK  
Sbjct: 486  SSEDESSDADEEMIEEAND--FFVEEPSIKKGKKDAQAKGNKEEKQLLDTDKEAEASKAE 543

Query: 537  XXXXXADDKGTEAALXXXXXXXXXXXXXXXXXAIDEGKIPNSAYDDSRFAALV-SPDYAI 713
                 ADD   +  +                   DE K+P   YDD RF+AL  SP +A+
Sbjct: 544  LELLLADDNEIDNGIKGYNLKRKKAKGKRGKEVPDENKLPTVDYDDPRFSALFNSPLFAL 603

Query: 714  DPTDPQFKRSAVYARQLAQKQQKGHMELSAERENTKLPKGTQLSADDSGMMQKGEEEGLD 893
            DPTDPQFKRSA YARQ+AQ+Q KG  +  AE E+ K P  +QL +D+     K E    D
Sbjct: 604  DPTDPQFKRSAAYARQMAQRQHKGDRQELAEGEHKKQPAKSQLLSDEPDA-NKNEHLTSD 662

Query: 894  LLKSKKDKYELSSLVKSIKMKSKQIQLPSDGKTRKDGKSQFK 1019
               SKK+K+ELS+LV+SIKMKSKQ+QLPS+GKT+KD K QF+
Sbjct: 663  AASSKKEKHELSALVRSIKMKSKQVQLPSNGKTKKDEKIQFR 704


>ref|XP_002327731.1| predicted protein [Populus trichocarpa] gi|222836816|gb|EEE75209.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  217 bits (552), Expect = 6e-54
 Identities = 150/346 (43%), Positives = 181/346 (52%), Gaps = 5/346 (1%)
 Frame = +3

Query: 3    TLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXLLVSGNGS 182
            TLK+K N +QLA+LEL EFL                  +             L+ SG+GS
Sbjct: 124  TLKQKFNADQLAELELKEFLASDESETDNDEADNDMEDESDKKHKKRDKYRALIQSGDGS 183

Query: 183  DEEDAEHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXXXY 362
            DE D E G  QDMEVTFNTGLED+SK I+EKKDKKSETVWEAYL               Y
Sbjct: 184  DE-DQEEG--QDMEVTFNTGLEDLSKRILEKKDKKSETVWEAYLRKRREKKKARKNQSKY 240

Query: 363  -XXXXXXXXXXXXXXXXXXXXXFFIEEPAAKK---RKNEQNKNDKDHELKDRDGVDKASK 530
                                  FFIEEP+ KK   +  +  KN ++ +L+D D   +ASK
Sbjct: 241  SSEEDSSDTDEEGMEGIEQPDDFFIEEPSVKKVNSKDYQGKKNKEEKQLQDTDREAEASK 300

Query: 531  XXXXXXXADDKGTEAALXXXXXXXXXXXXXXXXXAIDEGKIPNSAYDDSRFAAL-VSPDY 707
                   ADDKG +  L                   DE KIP S  DD RF+AL  SP +
Sbjct: 301  AELELLLADDKGGKKGLKGYNLKPKKAKGKKGKEVPDEDKIPTSNLDDPRFSALFTSPLF 360

Query: 708  AIDPTDPQFKRSAVYARQLAQKQQKGHMELSAERENTKLPKGTQLSADDSGMMQKGEEEG 887
            A+DPTDPQFKRSAVYARQLA K QK   +   E EN K  +  QL +DD   M + E   
Sbjct: 361  ALDPTDPQFKRSAVYARQLALKPQKSGEQQLVEGENEKQAEKAQLLSDDPA-MDRNEYMI 419

Query: 888  LDLLKSKKDKYELSSLVKSIKMKSKQIQLPSDGKTRKDGKSQFKGM 1025
             D L  +K+KYELS+LV+SIKMKSKQ+Q  S+    KD K Q KG+
Sbjct: 420  SDGLPERKEKYELSTLVRSIKMKSKQVQSSSN---TKDKKLQPKGL 462


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