BLASTX nr result

ID: Glycyrrhiza23_contig00021066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021066
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU20255.1| unknown [Glycine max]                                  167   1e-39
ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo...   152   2e-35
ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]   134   1e-29
ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula] g...   126   2e-27
ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]   124   6e-27

>gb|ACU20255.1| unknown [Glycine max]
          Length = 246

 Score =  167 bits (422), Expect = 1e-39
 Identities = 85/106 (80%), Positives = 88/106 (83%)
 Frame = -3

Query: 319 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 140
           MATESPIRISEAG KWPSLKEAAT  SPS +MATEDL I L GHRFH SGKD  PNRSGS
Sbjct: 1   MATESPIRISEAGSKWPSLKEAATFGSPSRHMATEDLGIFLNGHRFHGSGKDAVPNRSGS 60

Query: 139 APPSMEGSFLATENLLSQKTTRNVSLVTLNRAMQKYDTGKDYLHLS 2
           APPSMEGSFLA ENLLSQ TTRN SL + NRAMQKYD+GK   HLS
Sbjct: 61  APPSMEGSFLAIENLLSQNTTRNASLGSRNRAMQKYDSGKGSFHLS 106


>ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6,
           chloroplastic-like [Glycine max]
          Length = 952

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/98 (79%), Positives = 82/98 (83%)
 Frame = -3

Query: 319 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 140
           MATESPIRISEAG KWPSLKEAAT  SPS +MATEDL I L GHRFH SGKD  PNRSGS
Sbjct: 1   MATESPIRISEAGSKWPSLKEAATFGSPSRHMATEDLGIFLNGHRFHGSGKDAVPNRSGS 60

Query: 139 APPSMEGSFLATENLLSQKTTRNVSLVTLNRAMQKYDT 26
           APPSMEGSFLA ENLLSQ TTRN SL + NRAMQK ++
Sbjct: 61  APPSMEGSFLAIENLLSQNTTRNASLGSRNRAMQKCES 98


>ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
          Length = 982

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/99 (71%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
 Frame = -3

Query: 319 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 140
           MATESPIRISEAGGKWPS KEAA   S S NMATEDL ILLKGHR+   GKDV PNRSGS
Sbjct: 1   MATESPIRISEAGGKWPSHKEAAAFGSLSRNMATEDLGILLKGHRYQGGGKDVAPNRSGS 60

Query: 139 APPSMEGSFLATENLLSQ-KTTRNVSLVTLNRAMQKYDT 26
           APPS+EGSFLA ENLL Q  TT+N S   L+ AMQ  ++
Sbjct: 61  APPSIEGSFLAIENLLPQHNTTQNASFANLSSAMQNCES 99


>ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula]
           gi|355484026|gb|AES65229.1| Pumilio-like protein
           [Medicago truncatula]
          Length = 984

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/98 (64%), Positives = 75/98 (76%)
 Frame = -3

Query: 319 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 140
           MATESPIRISEAGGKWPS  EA+   +P  NM  EDL +LLKGHRF  SGKD  P+RSGS
Sbjct: 1   MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS 60

Query: 139 APPSMEGSFLATENLLSQKTTRNVSLVTLNRAMQKYDT 26
           APPSMEGSFLA ENLL  + T++ SL  L+RA++  ++
Sbjct: 61  APPSMEGSFLAIENLLPLQNTQDASLTGLSRAVKNCES 98


>ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
          Length = 985

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/99 (67%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
 Frame = -3

Query: 319 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 140
           MATES IRISEAGGKWPS KEAA   S S NMATEDL ILLKGHRF   GKD  PNRSGS
Sbjct: 1   MATESLIRISEAGGKWPSHKEAAAFGSSSRNMATEDLGILLKGHRFQGGGKDAAPNRSGS 60

Query: 139 APPSMEGSFLATENLLSQ-KTTRNVSLVTLNRAMQKYDT 26
           APPS+EGSFLA ENLL Q  T +N S   L+   Q  ++
Sbjct: 61  APPSIEGSFLAIENLLPQHNTAQNASFANLSSTTQNCES 99


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