BLASTX nr result

ID: Glycyrrhiza23_contig00021059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021059
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28908.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ...    92   4e-17
ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-17
ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-17

>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/55 (78%), Positives = 53/55 (96%)
 Frame = -1

Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVDS 169
           GRE+PG+VRT++INALRKAGNADLA+KLMHS+IGIGY+R+ S+KRRVKF+ LVDS
Sbjct: 604 GREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYDRMGSIKRRVKFRVLVDS 658


>ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|222870459|gb|EEF07590.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/54 (81%), Positives = 52/54 (96%)
 Frame = -1

Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVD 172
           GREIPG+VRTV+INALRKAGNADLA+KLMHS+IGIGY+R+ SVKRRVKF+ LV+
Sbjct: 546 GREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMGSVKRRVKFRILVE 599


>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338011|gb|EFH68428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 662

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = -1

Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVDS*FFWH 154
           GRE+PG++RTVMINALRK G ADLA+KLMHS+IGIGYER+ SVKRRVKF TL+++ F  H
Sbjct: 602 GREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETCFDSH 661


>ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/55 (74%), Positives = 53/55 (96%)
 Frame = -1

Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVDS 169
           GREIPG++RTV+INALRKAGN+DL IKLMHS+IGIGY+R+ S+KRRVKF+TL+++
Sbjct: 599 GREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRRVKFRTLLEN 653


>ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/55 (74%), Positives = 53/55 (96%)
 Frame = -1

Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVDS 169
           GREIPG++RTV+INALRKAGN+DL IKLMHS+IGIGY+R+ S+KRRVKF+TL+++
Sbjct: 597 GREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRRVKFRTLLEN 651


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