BLASTX nr result
ID: Glycyrrhiza23_contig00021059
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00021059 (333 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28908.3| unnamed protein product [Vitis vinifera] 94 9e-18 ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-17 ref|XP_002892169.1| pentatricopeptide repeat-containing protein ... 92 4e-17 ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi... 91 7e-17 ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi... 91 7e-17 >emb|CBI28908.3| unnamed protein product [Vitis vinifera] Length = 658 Score = 94.4 bits (233), Expect = 9e-18 Identities = 43/55 (78%), Positives = 53/55 (96%) Frame = -1 Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVDS 169 GRE+PG+VRT++INALRKAGNADLA+KLMHS+IGIGY+R+ S+KRRVKF+ LVDS Sbjct: 604 GREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYDRMGSIKRRVKFRVLVDS 658 >ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa] Length = 599 Score = 92.4 bits (228), Expect = 3e-17 Identities = 44/54 (81%), Positives = 52/54 (96%) Frame = -1 Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVD 172 GREIPG+VRTV+INALRKAGNADLA+KLMHS+IGIGY+R+ SVKRRVKF+ LV+ Sbjct: 546 GREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMGSVKRRVKFRILVE 599 >ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 662 Score = 92.0 bits (227), Expect = 4e-17 Identities = 44/60 (73%), Positives = 53/60 (88%) Frame = -1 Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVDS*FFWH 154 GRE+PG++RTVMINALRK G ADLA+KLMHS+IGIGYER+ SVKRRVKF TL+++ F H Sbjct: 602 GREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETCFDSH 661 >ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560, mitochondrial-like [Cucumis sativus] Length = 653 Score = 91.3 bits (225), Expect = 7e-17 Identities = 41/55 (74%), Positives = 53/55 (96%) Frame = -1 Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVDS 169 GREIPG++RTV+INALRKAGN+DL IKLMHS+IGIGY+R+ S+KRRVKF+TL+++ Sbjct: 599 GREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRRVKFRTLLEN 653 >ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560, mitochondrial-like [Cucumis sativus] Length = 651 Score = 91.3 bits (225), Expect = 7e-17 Identities = 41/55 (74%), Positives = 53/55 (96%) Frame = -1 Query: 333 GREIPGKVRTVMINALRKAGNADLAIKLMHSRIGIGYERIRSVKRRVKFQTLVDS 169 GREIPG++RTV+INALRKAGN+DL IKLMHS+IGIGY+R+ S+KRRVKF+TL+++ Sbjct: 597 GREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRRVKFRTLLEN 651