BLASTX nr result

ID: Glycyrrhiza23_contig00021041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021041
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [M...    81   1e-13
ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813...    74   9e-12

>ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355500678|gb|AES81881.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1564

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 57/144 (39%), Positives = 70/144 (48%)
 Frame = +1

Query: 4    KRKVSKSIVDTKGKKLSKDAVDPKTREGSKDIDAKRRLVFKVKWRAXXXXXXXXXXXXXX 183
            ++ VSK  VD + ++++KD +DPK R+ SK+I   + L  + KW                
Sbjct: 889  RKNVSKDNVDPEKREITKDNIDPKRRKLSKEIVDSKHL--RKKW---------------- 930

Query: 184  XXXXXXPSAGNRASELNGNGNGLSKVLDSKLHPLTNEITGAAVMNKQFSKQKKLPDMPKS 363
                   SAG R  + N                      GAAVM KQ  KQKKL  MPKS
Sbjct: 931  -MNKKSRSAGKRKGKFN----------------------GAAVMKKQIPKQKKLHGMPKS 967

Query: 364  TKLLPKSDISHLCAVLHFPKNVKA 435
            TKLL K DIS LC VLHF KNVKA
Sbjct: 968  TKLLSKPDISGLCDVLHFSKNVKA 991


>ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813574 [Glycine max]
          Length = 1429

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 54/151 (35%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
 Frame = +1

Query: 1    KKRKVSKSIVDTKGKKLSKDAVDPKTREGSKDI------DAKRRLVFKVKWRAXXXXXXX 162
            K+RKVSK   D +  K + + VDPK R+ S D+      +A R +V    W+        
Sbjct: 770  KRRKVSKDNADPEWSKWTMNKVDPKRRKVSNDVVDSKGREASRNIVDSKYWKTRLKSKKN 829

Query: 163  XXXXXXXXXXXXXPSAGNRASELNGNGNGLSKVLDSKLHPLTNEITGAAVMNKQFSKQKK 342
                          S  NRA++ NG             HPLTNE TG    N QFS++K 
Sbjct: 830  T-------------SVVNRANKSNG-------------HPLTNETTGKIATNMQFSEKKN 863

Query: 343  LPDMPKSTKLLPKSDISHLCAVLHFPKNVKA 435
             PD+    + LPK DIS LC +L F K VKA
Sbjct: 864  PPDI----RNLPKPDISGLCDILRFSKKVKA 890


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