BLASTX nr result

ID: Glycyrrhiza23_contig00021035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021035
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago trun...   287   1e-75
ref|XP_003522515.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   266   4e-69
ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   266   4e-69
ref|XP_002265078.2| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   250   2e-64
emb|CBI23170.3| unnamed protein product [Vitis vinifera]              250   2e-64

>ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago truncatula]
            gi|355497702|gb|AES78905.1| Tyrosyl-DNA phosphodiesterase
            [Medicago truncatula]
          Length = 849

 Score =  287 bits (735), Expect = 1e-75
 Identities = 141/183 (77%), Positives = 147/183 (80%)
 Frame = +1

Query: 16   GYAAGSAIPSPMKNVEKEFLRKYWAKWKADHTGRNRAMPHIKTFARYNGQNLAWFLLTSA 195
            GYAAGSAIPSPMKNVEK FL+KYWAKWKA+HTGR RAMPHIKTFARYN QNLAWF LTS+
Sbjct: 626  GYAAGSAIPSPMKNVEKAFLKKYWAKWKANHTGRTRAMPHIKTFARYNNQNLAWFCLTSS 685

Query: 196  NLSKAAWGALQKNNSQLMIRSYELGVLFLPSLLKRGCGFSCTRNVTLSKDKCSAQEASEM 375
            NLSKAAWGALQKNNSQLMIRSYELGVLFLPSLLK GCGFSCT NV  SKDK  AQE S+M
Sbjct: 686  NLSKAAWGALQKNNSQLMIRSYELGVLFLPSLLKPGCGFSCTSNVKQSKDKSPAQETSKM 745

Query: 376  XXXXXXXXXXXXRETTHSSSEVIIQXXXXXXXXXXXXSSQDVPWSWDRRYFKKDVYGQVW 555
                        R+TTHSSSEVIIQ            SS+DVPWSWDRRYFKKD YGQVW
Sbjct: 746  KKTKLVTLTAPTRDTTHSSSEVIIQLPVPYELPPLPYSSEDVPWSWDRRYFKKDDYGQVW 805

Query: 556  PRM 564
            PRM
Sbjct: 806  PRM 808


>ref|XP_003522515.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 2 [Glycine
           max]
          Length = 599

 Score =  266 bits (679), Expect = 4e-69
 Identities = 131/184 (71%), Positives = 145/184 (78%), Gaps = 1/184 (0%)
 Frame = +1

Query: 16  GYAAGSAIPSPMKNVEKEFLRKYWAKWKADHTGRNRAMPHIKTFARYNGQNLAWFLLTSA 195
           GYAAG+A+PSP+KNVEK FL+KYWAKWKADHTGR RAMPHIKTFARY  Q+LAWFLLTSA
Sbjct: 416 GYAAGNAVPSPLKNVEKTFLKKYWAKWKADHTGRCRAMPHIKTFARYKNQSLAWFLLTSA 475

Query: 196 NLSKAAWGALQKNNSQLMIRSYELGVLFLPSLLKR-GCGFSCTRNVTLSKDKCSAQEASE 372
           NLSKAAWGALQKNN+QLMIRSYELGVLFLPSL KR    FSCT NVT+S+DKC A+E+SE
Sbjct: 476 NLSKAAWGALQKNNTQLMIRSYELGVLFLPSLFKRHESVFSCTSNVTVSEDKCPARESSE 535

Query: 373 MXXXXXXXXXXXXRETTHSSSEVIIQXXXXXXXXXXXXSSQDVPWSWDRRYFKKDVYGQV 552
           M            +E+ HSSSEVII             SSQD+PWSWDR+Y KKDVYG V
Sbjct: 536 MKKTKLVTLTGIKKESMHSSSEVIIPLPLPYELPPLPYSSQDIPWSWDRQYNKKDVYGHV 595

Query: 553 WPRM 564
           WPRM
Sbjct: 596 WPRM 599


>ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 1 [Glycine
           max]
          Length = 610

 Score =  266 bits (679), Expect = 4e-69
 Identities = 131/184 (71%), Positives = 145/184 (78%), Gaps = 1/184 (0%)
 Frame = +1

Query: 16  GYAAGSAIPSPMKNVEKEFLRKYWAKWKADHTGRNRAMPHIKTFARYNGQNLAWFLLTSA 195
           GYAAG+A+PSP+KNVEK FL+KYWAKWKADHTGR RAMPHIKTFARY  Q+LAWFLLTSA
Sbjct: 427 GYAAGNAVPSPLKNVEKTFLKKYWAKWKADHTGRCRAMPHIKTFARYKNQSLAWFLLTSA 486

Query: 196 NLSKAAWGALQKNNSQLMIRSYELGVLFLPSLLKR-GCGFSCTRNVTLSKDKCSAQEASE 372
           NLSKAAWGALQKNN+QLMIRSYELGVLFLPSL KR    FSCT NVT+S+DKC A+E+SE
Sbjct: 487 NLSKAAWGALQKNNTQLMIRSYELGVLFLPSLFKRHESVFSCTSNVTVSEDKCPARESSE 546

Query: 373 MXXXXXXXXXXXXRETTHSSSEVIIQXXXXXXXXXXXXSSQDVPWSWDRRYFKKDVYGQV 552
           M            +E+ HSSSEVII             SSQD+PWSWDR+Y KKDVYG V
Sbjct: 547 MKKTKLVTLTGIKKESMHSSSEVIIPLPLPYELPPLPYSSQDIPWSWDRQYNKKDVYGHV 606

Query: 553 WPRM 564
           WPRM
Sbjct: 607 WPRM 610


>ref|XP_002265078.2| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Vitis vinifera]
          Length = 621

 Score =  250 bits (638), Expect = 2e-64
 Identities = 125/182 (68%), Positives = 137/182 (75%)
 Frame = +1

Query: 16  GYAAGSAIPSPMKNVEKEFLRKYWAKWKADHTGRNRAMPHIKTFARYNGQNLAWFLLTSA 195
           GYAAG+AIPSP KNVEKEFL+KYWAKWKA HTGR RAMPHIKT+ RYNGQNLAWFLLTSA
Sbjct: 431 GYAAGNAIPSPQKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTYTRYNGQNLAWFLLTSA 490

Query: 196 NLSKAAWGALQKNNSQLMIRSYELGVLFLPSLLKRGCGFSCTRNVTLSKDKCSAQEASEM 375
           NLSKAAWGALQKNNSQLMIRSYELGVLFLPS + RG GFSCT N + SK+KC   E ++ 
Sbjct: 491 NLSKAAWGALQKNNSQLMIRSYELGVLFLPSPINRGQGFSCTDNGSPSKNKCGLSENTKS 550

Query: 376 XXXXXXXXXXXXRETTHSSSEVIIQXXXXXXXXXXXXSSQDVPWSWDRRYFKKDVYGQVW 555
                         ++ SSSEV I             SS+DVPWSWDRRY+KKDV GQVW
Sbjct: 551 QRTKLVTLTWEGNRSSDSSSEV-IPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVW 609

Query: 556 PR 561
           PR
Sbjct: 610 PR 611


>emb|CBI23170.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  250 bits (638), Expect = 2e-64
 Identities = 125/182 (68%), Positives = 137/182 (75%)
 Frame = +1

Query: 16   GYAAGSAIPSPMKNVEKEFLRKYWAKWKADHTGRNRAMPHIKTFARYNGQNLAWFLLTSA 195
            GYAAG+AIPSP KNVEKEFL+KYWAKWKA HTGR RAMPHIKT+ RYNGQNLAWFLLTSA
Sbjct: 488  GYAAGNAIPSPQKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTYTRYNGQNLAWFLLTSA 547

Query: 196  NLSKAAWGALQKNNSQLMIRSYELGVLFLPSLLKRGCGFSCTRNVTLSKDKCSAQEASEM 375
            NLSKAAWGALQKNNSQLMIRSYELGVLFLPS + RG GFSCT N + SK+KC   E ++ 
Sbjct: 548  NLSKAAWGALQKNNSQLMIRSYELGVLFLPSPINRGQGFSCTDNGSPSKNKCGLSENTKS 607

Query: 376  XXXXXXXXXXXXRETTHSSSEVIIQXXXXXXXXXXXXSSQDVPWSWDRRYFKKDVYGQVW 555
                          ++ SSSEV I             SS+DVPWSWDRRY+KKDV GQVW
Sbjct: 608  QRTKLVTLTWEGNRSSDSSSEV-IPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVW 666

Query: 556  PR 561
            PR
Sbjct: 667  PR 668


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