BLASTX nr result

ID: Glycyrrhiza23_contig00021034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021034
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524278.1| PREDICTED: uncharacterized protein LOC100807...   167   6e-40
ref|XP_003532843.1| PREDICTED: uncharacterized protein LOC100794...   162   3e-38
ref|XP_003630077.1| hypothetical protein MTR_8g091480 [Medicago ...   149   6e-37
emb|CBI21471.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002276780.2| PREDICTED: formation of crista junctions pro...    87   1e-15

>ref|XP_003524278.1| PREDICTED: uncharacterized protein LOC100807909, partial [Glycine
           max]
          Length = 642

 Score =  167 bits (424), Expect = 6e-40
 Identities = 83/117 (70%), Positives = 97/117 (82%)
 Frame = +1

Query: 163 MLRRSILEISSRQTIRRNPRHFINQKIPSHLSSRKKFSNASRPGGASAPGSTGKPPESND 342
           ++ R IL+ISSR T+RRNPR F+ Q+IP HLS +K FS AS+PG +SA GS GKPPESN 
Sbjct: 2   LILRYILQISSRPTLRRNPRRFVYQQIPLHLSLQKNFSTASKPGVSSASGSPGKPPESNG 61

Query: 343 SLSKFFIGSVAVGAAFLAVYQTGYLDKYLKKEQHSVPQEAQINATTGDLKSVQHSID 513
           +LSKFFIGSVA+GAAFLA YQTGYLD+YLKKE +SVPQE  +NAT  DLKSVQHS D
Sbjct: 62  TLSKFFIGSVALGAAFLAAYQTGYLDQYLKKEHYSVPQEPHVNATIEDLKSVQHSTD 118


>ref|XP_003532843.1| PREDICTED: uncharacterized protein LOC100794530, partial [Glycine
           max]
          Length = 646

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/117 (70%), Positives = 96/117 (82%)
 Frame = +1

Query: 163 MLRRSILEISSRQTIRRNPRHFINQKIPSHLSSRKKFSNASRPGGASAPGSTGKPPESND 342
           ++ RSIL+ISSR T++RNPR F+ Q IP HLSS+K FS  S+PGGASA GS GKPPESN 
Sbjct: 2   LILRSILQISSRPTLKRNPRRFVYQ-IPLHLSSQKNFSTVSKPGGASASGSPGKPPESNG 60

Query: 343 SLSKFFIGSVAVGAAFLAVYQTGYLDKYLKKEQHSVPQEAQINATTGDLKSVQHSID 513
           +LSKFFIGSVA+GAAFLA YQT YLD+YLKKE +SV QE  +NAT  DLKSVQHS D
Sbjct: 61  TLSKFFIGSVALGAAFLAAYQTHYLDQYLKKEHYSVLQEPHVNATIEDLKSVQHSTD 117


>ref|XP_003630077.1| hypothetical protein MTR_8g091480 [Medicago truncatula]
           gi|355524099|gb|AET04553.1| hypothetical protein
           MTR_8g091480 [Medicago truncatula]
          Length = 776

 Score =  149 bits (376), Expect(2) = 6e-37
 Identities = 79/115 (68%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
 Frame = +1

Query: 175 SILEISSR-QTIRRNPRHFINQKIPSHLSSRKKFSNASRPGGASAPGSTGKPPESNDSLS 351
           SIL+ SSR Q+ R NPR+F NQKIPSHLSS+KKFSNAS+P GASA  STGKPPES+ S S
Sbjct: 112 SILQFSSRRQSFRTNPRYFSNQKIPSHLSSQKKFSNASKPAGASASDSTGKPPESHGSKS 171

Query: 352 KFF-IGSVAVGAAFLAVYQTGYLDKYLKKEQHSVPQEAQINATTGDLKSVQHSID 513
           KFF IG   V A  LA YQ G+LDKY++KE+ SVPQEAQI+ T GDL+S QHSI+
Sbjct: 172 KFFLIGGAGVSAVLLAAYQFGFLDKYVEKEKLSVPQEAQIDGTVGDLESGQHSIE 226



 Score = 30.0 bits (66), Expect(2) = 6e-37
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +3

Query: 24  PRQSAKKLLHLTDYYNSRSTPFFLVQSFPQTPSSQSL 134
           P Q++ + L L   +N R +   LVQ FPQTP S SL
Sbjct: 69  PPQTSGQGLSLGVRHNQRQSAKKLVQPFPQTPCSPSL 105


>emb|CBI21471.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/95 (53%), Positives = 64/95 (67%)
 Frame = +1

Query: 163 MLRRSILEISSRQTIRRNPRHFINQKIPSHLSSRKKFSNASRPGGASAPGSTGKPPESND 342
           MLRRS+LEISSR+   R PR   +Q+IP   SSRK+FS AS+   +   GSTGKP  S  
Sbjct: 1   MLRRSVLEISSRKYYARVPRRITSQQIPPFFSSRKEFSAASQQNTSQGSGSTGKPSNSGS 60

Query: 343 SLSKFFIGSVAVGAAFLAVYQTGYLDKYLKKEQHS 447
            +SKF +G V +GAA +  YQTGYLD+ + KE HS
Sbjct: 61  FMSKFIVGGVVIGAAVMTAYQTGYLDQIIVKEPHS 95


>ref|XP_002276780.2| PREDICTED: formation of crista junctions protein 1-like [Vitis
           vinifera]
          Length = 671

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/123 (41%), Positives = 64/123 (52%), Gaps = 28/123 (22%)
 Frame = +1

Query: 163 MLRRSILEISSRQTIRRNPRHFINQK----------------------------IPSHLS 258
           MLRRS+LEISSR+   R PR   +Q+                            IP   S
Sbjct: 1   MLRRSVLEISSRKYYARVPRRITSQEEFTVWHGFTALGTSLELGFLPHGLVVGTIPPFFS 60

Query: 259 SRKKFSNASRPGGASAPGSTGKPPESNDSLSKFFIGSVAVGAAFLAVYQTGYLDKYLKKE 438
           SRK+FS AS+   +   GSTGKP  S   +SKF +G V +GAA +  YQTGYLD+ + KE
Sbjct: 61  SRKEFSAASQQNTSQGSGSTGKPSNSGSFMSKFIVGGVVIGAAVMTAYQTGYLDQIIVKE 120

Query: 439 QHS 447
            HS
Sbjct: 121 PHS 123


Top