BLASTX nr result

ID: Glycyrrhiza23_contig00021028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021028
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42553.1| unknown [Lotus japonicus]                               77   2e-12
ref|XP_003550092.1| PREDICTED: transmembrane protein 70 homolog,...    65   6e-09
ref|XP_002529718.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
ref|XP_002277030.1| PREDICTED: uncharacterized protein LOC100266...    62   4e-08
ref|XP_002312028.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>gb|AFK42553.1| unknown [Lotus japonicus]
          Length = 251

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/73 (60%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   QLAAAQVRWASQATPTEED-KISIGPANGGKSGEEGDRETEVVYHGPISSTIXXXXXXXX 177
           QLA AQ+RWASQAT  EED KISIGPA GG+SGE+ D+ET VVY+GPISSTI        
Sbjct: 59  QLAVAQIRWASQATTREEDNKISIGPAGGGQSGED-DKETGVVYNGPISSTIKKVKLLSL 117

Query: 178 XXXXXXXXXGPVI 216
                    GPVI
Sbjct: 118 STCCLSVSLGPVI 130


>ref|XP_003550092.1| PREDICTED: transmembrane protein 70 homolog, mitochondrial-like
           [Glycine max]
          Length = 241

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/72 (54%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +1

Query: 4   LAAAQVRWASQATPTEED-KISIGPANGGKSGEEGDRETEVVYHGPISSTIXXXXXXXXX 180
           LA  Q RWASQ   TEED KISIGP +GG+ GE GD+ET VVY+GPIS+TI         
Sbjct: 50  LAIFQRRWASQIPTTEEDDKISIGPRSGGQPGE-GDKETGVVYYGPISNTIKKVKLLSLS 108

Query: 181 XXXXXXXXGPVI 216
                   GPVI
Sbjct: 109 TCCLSVSLGPVI 120


>ref|XP_002529718.1| conserved hypothetical protein [Ricinus communis]
           gi|223530820|gb|EEF32684.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   QLAAAQVRWASQATPTEED-KISIGPANGGKSGEEGDRETEVVYHGPISSTIXXXXXXXX 177
           Q+AA+Q RWASQA  TE+D +ISIGP  G ++GE+ ++ET VVY+GPISSTI        
Sbjct: 50  QIAASQKRWASQARTTEDDNRISIGPRRGKEAGED-EKETGVVYYGPISSTIKKVKLLSL 108

Query: 178 XXXXXXXXXGPVI 216
                    GPVI
Sbjct: 109 STCCLSVSLGPVI 121


>ref|XP_002277030.1| PREDICTED: uncharacterized protein LOC100266780 [Vitis vinifera]
           gi|296086053|emb|CBI31494.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   QLAAAQVRWASQATPTEED-KISIGPANGGKSGEEGDRETEVVYHGPISSTIXXXXXXXX 177
           QLAA+Q RWAS+A   E+D KISIGP  GG+  EE ++++ +VYHGPISST+        
Sbjct: 49  QLAASQRRWASKARTAEDDSKISIGPRRGGEM-EEDEKDSGIVYHGPISSTVKKVKLLSL 107

Query: 178 XXXXXXXXXGPVI 216
                    GPVI
Sbjct: 108 STCCLSVSLGPVI 120


>ref|XP_002312028.1| predicted protein [Populus trichocarpa] gi|222851848|gb|EEE89395.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/72 (51%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +1

Query: 4   LAAAQVRWASQATPTEED-KISIGPANGGKSGEEGDRETEVVYHGPISSTIXXXXXXXXX 180
           LAA Q RWASQA  TE+D KISIGP  GGK   + ++ET VVY+GPISST+         
Sbjct: 52  LAATQKRWASQAKTTEDDNKISIGP-RGGKEVGQDEKETGVVYYGPISSTVKKVKLLSLS 110

Query: 181 XXXXXXXXGPVI 216
                   GPVI
Sbjct: 111 TCCLSVSLGPVI 122


Top