BLASTX nr result

ID: Glycyrrhiza23_contig00021017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021017
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding prote...   343   2e-92
ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding prote...   343   2e-92
ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding prote...   338   3e-91
ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding prote...   338   3e-91
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...   333   1e-89

>ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Glycine max]
          Length = 392

 Score =  343 bits (879), Expect = 2e-92
 Identities = 167/200 (83%), Positives = 180/200 (90%)
 Frame = -1

Query: 602 SQCFAHTGDVVSIKIIRNKMTGQPEGYGFVEFVSHAAAERVLHTYNGAQMPGTELAFRLN 423
           SQCFAH G+VVSIKIIRNK+TGQPEGYGFVEFVSHA+AE  L TYNGAQMPGTE  FRLN
Sbjct: 27  SQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRTYNGAQMPGTEQTFRLN 86

Query: 422 WASSGDTGPDHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPLTGRSKGYGFVKF 243
           WAS GD+GPDHSIFVGDLAPDVTD+LLQETFRAHYPSV+GAKVVTDP TGRSKGYGFVKF
Sbjct: 87  WASFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKF 146

Query: 242 SDEAQRNRAMTEMNGVYCSTRPMRISAATPKKTTSFQHQQYAAPPKAIYPLPAYTTPVNA 63
           +DEAQRNRAMTEMNGVYCSTRPMRISAATPKK  SFQHQ   APPKA+Y  PAY+ PV+A
Sbjct: 147 ADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQY--APPKAMYQFPAYSAPVSA 204

Query: 62  VVPDNDNDMNNTTVFVGNLD 3
           V P  +ND+NNTTV +GNLD
Sbjct: 205 VAP--ENDVNNTTVCIGNLD 222


>ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 401

 Score =  343 bits (879), Expect = 2e-92
 Identities = 167/200 (83%), Positives = 180/200 (90%)
 Frame = -1

Query: 602 SQCFAHTGDVVSIKIIRNKMTGQPEGYGFVEFVSHAAAERVLHTYNGAQMPGTELAFRLN 423
           SQCFAH G+VVSIKIIRNK+TGQPEGYGFVEFVSHA+AE  L TYNGAQMPGTE  FRLN
Sbjct: 27  SQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRTYNGAQMPGTEQTFRLN 86

Query: 422 WASSGDTGPDHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPLTGRSKGYGFVKF 243
           WAS GD+GPDHSIFVGDLAPDVTD+LLQETFRAHYPSV+GAKVVTDP TGRSKGYGFVKF
Sbjct: 87  WASFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKF 146

Query: 242 SDEAQRNRAMTEMNGVYCSTRPMRISAATPKKTTSFQHQQYAAPPKAIYPLPAYTTPVNA 63
           +DEAQRNRAMTEMNGVYCSTRPMRISAATPKK  SFQHQ   APPKA+Y  PAY+ PV+A
Sbjct: 147 ADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQY--APPKAMYQFPAYSAPVSA 204

Query: 62  VVPDNDNDMNNTTVFVGNLD 3
           V P  +ND+NNTTV +GNLD
Sbjct: 205 VAP--ENDVNNTTVCIGNLD 222


>ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Glycine max]
          Length = 392

 Score =  338 bits (868), Expect = 3e-91
 Identities = 163/200 (81%), Positives = 180/200 (90%)
 Frame = -1

Query: 602 SQCFAHTGDVVSIKIIRNKMTGQPEGYGFVEFVSHAAAERVLHTYNGAQMPGTELAFRLN 423
           SQCFAH+G+VVSIKIIRNK+TGQPEGYGFVEFVSHA+AE  L T+NGAQMPGT+  FRLN
Sbjct: 27  SQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRTFNGAQMPGTDQTFRLN 86

Query: 422 WASSGDTGPDHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPLTGRSKGYGFVKF 243
           WAS GD+GPDHSIFVGDLAPDVTD++LQETFRAHYPSV+G+KVVTDP TGRSKGYGFVKF
Sbjct: 87  WASFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKF 146

Query: 242 SDEAQRNRAMTEMNGVYCSTRPMRISAATPKKTTSFQHQQYAAPPKAIYPLPAYTTPVNA 63
           +DEAQRNRAMTEMNGVYCSTRPMRISAATPKK  SFQHQ   APPKA+Y  PAYT PV+ 
Sbjct: 147 ADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQY--APPKAMYQFPAYTAPVST 204

Query: 62  VVPDNDNDMNNTTVFVGNLD 3
           V P  +ND+NNTTV +GNLD
Sbjct: 205 VAP--ENDVNNTTVCIGNLD 222


>ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 401

 Score =  338 bits (868), Expect = 3e-91
 Identities = 163/200 (81%), Positives = 180/200 (90%)
 Frame = -1

Query: 602 SQCFAHTGDVVSIKIIRNKMTGQPEGYGFVEFVSHAAAERVLHTYNGAQMPGTELAFRLN 423
           SQCFAH+G+VVSIKIIRNK+TGQPEGYGFVEFVSHA+AE  L T+NGAQMPGT+  FRLN
Sbjct: 27  SQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRTFNGAQMPGTDQTFRLN 86

Query: 422 WASSGDTGPDHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPLTGRSKGYGFVKF 243
           WAS GD+GPDHSIFVGDLAPDVTD++LQETFRAHYPSV+G+KVVTDP TGRSKGYGFVKF
Sbjct: 87  WASFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKF 146

Query: 242 SDEAQRNRAMTEMNGVYCSTRPMRISAATPKKTTSFQHQQYAAPPKAIYPLPAYTTPVNA 63
           +DEAQRNRAMTEMNGVYCSTRPMRISAATPKK  SFQHQ   APPKA+Y  PAYT PV+ 
Sbjct: 147 ADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQY--APPKAMYQFPAYTAPVST 204

Query: 62  VVPDNDNDMNNTTVFVGNLD 3
           V P  +ND+NNTTV +GNLD
Sbjct: 205 VAP--ENDVNNTTVCIGNLD 222


>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 438

 Score =  333 bits (854), Expect = 1e-89
 Identities = 166/204 (81%), Positives = 177/204 (86%), Gaps = 6/204 (2%)
 Frame = -1

Query: 596 CFAHTGDVVSIKIIRNKMTGQPEGYGFVEFVSHAAAERVLHTYNGAQMPGTELAFRLNWA 417
           CFAHTG+V+SIKIIRNK+TGQPEGYGFVEFVSHAAAER+L  YNG QMPGTE  FRLNWA
Sbjct: 60  CFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWA 119

Query: 416 SSG------DTGPDHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPLTGRSKGYG 255
           S G      D GP+HSIFVGDLAPDVTDYLLQETFRA YPSVRGAKVVTDP TGR+KGYG
Sbjct: 120 SFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYG 179

Query: 254 FVKFSDEAQRNRAMTEMNGVYCSTRPMRISAATPKKTTSFQHQQYAAPPKAIYPLPAYTT 75
           FVKFSDE +RNRAMTEMNGVYCSTRPMRISAATPKKTT FQ QQYAA  KA+YP PAYTT
Sbjct: 180 FVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQ-QQYAAAAKALYPAPAYTT 238

Query: 74  PVNAVVPDNDNDMNNTTVFVGNLD 3
           P    +P  DND+NNTT+FVGNLD
Sbjct: 239 PPLQALP-ADNDINNTTIFVGNLD 261


Top