BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020983
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub...   168   4e-82
ref|XP_003629969.1| Replication factor A protein [Medicago trunc...   152   6e-70
ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding sub...   183   3e-65
ref|XP_003605305.1| Replication factor A protein [Medicago trunc...   138   3e-63
ref|XP_003625877.1| hypothetical protein MTR_7g108280 [Medicago ...   145   8e-60

>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355484558|gb|AES65761.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 549

 Score =  168 bits (425), Expect(2) = 4e-82
 Identities = 84/143 (58%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = +2

Query: 29  MANRNDPVSAISPAKESWSIIVRVVRLWFVSDFNKQNIPFSMEMVLMDDKGDKIHASVRK 208
           MA + D +S ISP+KE+W+I VRVVRLWFV D  K  +P+S+EMVLMD+KGD+I+ASVR+
Sbjct: 1   MAPKIDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRR 60

Query: 209 TLIYKFDKELKEGCVYSISNFGVACNGGSFRTTRHDYKLNFQIGTKVLNIDNSFVSCSPF 388
           TLIYK++KEL+E  V+SI NF VA N GS+RT RH YK+NFQ GTK+   D+ FV    +
Sbjct: 61  TLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQCDDKFVPADIY 120

Query: 389 SLVPFSEINDS-YDTNFLIDVMG 454
            +    EI  S YDT++LIDVMG
Sbjct: 121 VIGDSREIFQSEYDTDYLIDVMG 143



 Score =  164 bits (414), Expect(2) = 4e-82
 Identities = 75/162 (46%), Positives = 109/162 (67%)
 Frame = +3

Query: 468 VGTERQYERNGTPVKMNVIELEADGVKIECALFGHYVDDLNSFLATGEIQRPVVILQLAK 647
           VG E+ Y RNG+  KM  IEL+ DG + +  LFG YVD+LN+FLA+GE +  VV + L K
Sbjct: 148 VGVEKSYTRNGSQSKMIPIELDYDGFRFKVTLFGPYVDELNAFLASGETENVVVAVLLTK 207

Query: 648 VKPFQGKIQLQNAISCTKILFNPECAEVSAFKKRVCHTDDSPSQTLSQLAETPRISLEDE 827
           +K FQG+  +QN I+ TK+LFNP        KKR+   DDSPS  +S++ E  ++S+E++
Sbjct: 208 IKIFQGQATIQNTINATKVLFNPTFTAALLLKKRMVENDDSPSPGISKITEASKVSVEED 267

Query: 828 FLSLTQRKTILELKDCKDETCAVVLGTIKHILEEGEWWYTAC 953
           FL+L+   T+  LKDC +E C  V GT+  I+++ +WWYT+C
Sbjct: 268 FLNLSPMTTVEGLKDCAEEKCFAVFGTVNVIVDDSDWWYTSC 309


>ref|XP_003629969.1| Replication factor A protein [Medicago truncatula]
           gi|355523991|gb|AET04445.1| Replication factor A protein
           [Medicago truncatula]
          Length = 296

 Score =  152 bits (384), Expect(2) = 6e-70
 Identities = 71/143 (49%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
 Frame = +2

Query: 29  MANRNDPVSAISPAKESWSIIVRVVRLWFVSDFNKQNIPFSMEMVLMDDKGDKIHASVRK 208
           M+ ++D +S +SP K+SW+++VRVVR WF  D+  + +PFSME VL+D KGD+I AS+R+
Sbjct: 1   MSTKHDFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDRKGDQIGASIRR 60

Query: 209 TLIYKFDKELKEGCVYSISNFGVACNGGSFRTTRHDYKLNFQIGTKVLNIDNSFVSCSPF 388
           TLIYKF ++L+EG V++IS+F VA N GS+R + ++YKLNF I TKV       V  + +
Sbjct: 61  TLIYKFKEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVKLSKTILVPINVY 120

Query: 389 SLVPFSEI-NDSYDTNFLIDVMG 454
           S  P  ++ N+SYD N+L+DV+G
Sbjct: 121 SFTPAPDVFNESYDNNYLVDVIG 143



 Score =  139 bits (350), Expect(2) = 6e-70
 Identities = 74/147 (50%), Positives = 96/147 (65%)
 Frame = +3

Query: 465 GVGTERQYERNGTPVKMNVIELEADGVKIECALFGHYVDDLNSFLATGEIQRPVVILQLA 644
           GVG ER+YER GT  KMNVIEL+++G + +C LFG YV++LNS L++ E Q  VV + L 
Sbjct: 147 GVGVEREYEREGTKTKMNVIELDSNGYRFKCTLFGEYVEELNSLLSSDESQNVVVAIMLT 206

Query: 645 KVKPFQGKIQLQNAISCTKILFNPECAEVSAFKKRVCHTDDSPSQTLSQLAETPRISLED 824
           KVK FQGK  LQNA+S T+I FNPE  E    +K      +SP+  L QL  + RI + +
Sbjct: 207 KVKLFQGKPALQNALSSTRITFNPEIGETKELRKSA--NTNSPASGLIQLPNSSRIPVNE 264

Query: 825 EFLSLTQRKTILELKDCKDETCAVVLG 905
           EFL LT R TI ELK+    T  ++LG
Sbjct: 265 EFLLLTPRTTIEELKNVNKGTSFILLG 291


>ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355489320|gb|AES70523.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 701

 Score =  183 bits (465), Expect(2) = 3e-65
 Identities = 93/164 (56%), Positives = 116/164 (70%)
 Frame = +3

Query: 462 TGVGTERQYERNGTPVKMNVIELEADGVKIECALFGHYVDDLNSFLATGEIQRPVVILQL 641
           TGVGTER+YERNG+  K+NVI +EADG K++C LFG YVD+LN+FLATGE    VV +QL
Sbjct: 287 TGVGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQL 346

Query: 642 AKVKPFQGKIQLQNAISCTKILFNPECAEVSAFKKRVCHTDDSPSQTLSQLAETPRISLE 821
           AKVK FQ  I +QN ++CT++ FNP CAE +AFK R+   DD+PS  L+QLA  P I   
Sbjct: 347 AKVKVFQDNIHIQNCLNCTRLKFNPVCAEGTAFKNRMIENDDTPS-PLTQLAVEPSIDPL 405

Query: 822 DEFLSLTQRKTILELKDCKDETCAVVLGTIKHILEEGEWWYTAC 953
            +FL  T R TI  LKD + E   VVLGT+K I+    W+YTAC
Sbjct: 406 QDFLFNTPRTTIQGLKDSQQEGMYVVLGTVKQIVNPENWYYTAC 449



 Score = 92.4 bits (228), Expect(2) = 3e-65
 Identities = 49/114 (42%), Positives = 67/114 (58%)
 Frame = +2

Query: 113 FVSDFNKQNIPFSMEMVLMDDKGDKIHASVRKTLIYKFDKELKEGCVYSISNFGVACNGG 292
           F++     N+  S+++  +  KG KIHAS++KTL YKF  E++EG VYS  N GVA NGG
Sbjct: 190 FLATGETANVVVSIQLAKV--KGSKIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGG 247

Query: 293 SFRTTRHDYKLNFQIGTKVLNIDNSFVSCSPFSLVPFSEINDSYDTNFLIDVMG 454
           S++TT H YKLN Q GTK L +                    SYD ++L+DV+G
Sbjct: 248 SYKTTHHPYKLNVQFGTKCLPL-----------------CGGSYDCDYLVDVIG 284



 Score =  162 bits (409), Expect(2) = 6e-59
 Identities = 80/143 (55%), Positives = 104/143 (72%), Gaps = 1/143 (0%)
 Frame = +2

Query: 29  MANRNDPVSAISPAKESWSIIVRVVRLWFVSDFNKQNIPFSMEMVLMDDKGDKIHASVRK 208
           MA   +P+S IS +K + +I  RVVRLW +SDFN+  +PFS+EMVLMD +G +IHAS++K
Sbjct: 1   MALTFEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKK 60

Query: 209 TLIYKFDKELKEGCVYSISNFGVACNGGSFRTTRHDYKLNFQIGTKVLNIDNSFVSCSPF 388
           TL YKF  E++EG VYS  N GVA NGGS++TT H YKLNFQ GTK L +  + VS S F
Sbjct: 61  TLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPLFGALVSGSDF 120

Query: 389 SLVPFSEI-NDSYDTNFLIDVMG 454
             VP S+I   SYD ++L+DV+G
Sbjct: 121 KFVPISDIVGGSYDCDYLVDVIG 143



 Score = 92.8 bits (229), Expect(2) = 6e-59
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = +3

Query: 462 TGVGTERQYERNGTPVKMNVIELEADGVKIECALFGHYVDDLNSFLATGEIQRPVVILQL 641
           TGVGTER+YERNG+  K+NVI +EADG K++C LFG YVD LN+FLATGE    VV +QL
Sbjct: 146 TGVGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYVDKLNTFLATGETANVVVSIQL 205

Query: 642 AKVK 653
           AKVK
Sbjct: 206 AKVK 209


>ref|XP_003605305.1| Replication factor A protein [Medicago truncatula]
           gi|355506360|gb|AES87502.1| Replication factor A protein
           [Medicago truncatula]
          Length = 283

 Score =  138 bits (348), Expect(2) = 3e-63
 Identities = 73/138 (52%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
 Frame = +3

Query: 462 TGVGTERQYERNGTPVKMNVIELEADGVKIECALFGHYVDDLNSFLATGEIQRPVVILQL 641
           TGVG ER+YER+G   KMNVIEL+++G + +C LFG YV++L+SFL++GE Q  VV + L
Sbjct: 127 TGVGVEREYERDGVKTKMNVIELDSNGYRFKCTLFGEYVEELSSFLSSGESQNVVVAIML 186

Query: 642 AKVKPFQGKIQLQNAISCTKILFNPECAEVSAFKKRVCHTD-DSPSQTLSQLAETPRISL 818
           AKVK FQGK  LQNA S T+I FNPE  E    +K     + +SP+  L QL  + RI +
Sbjct: 187 AKVKLFQGKPALQNAFSSTRITFNPEIGETKELRKSFLSANTNSPASGLIQLPNSSRILV 246

Query: 819 EDEFLSLTQRKTILELKD 872
            +EFL LT R TI ELK+
Sbjct: 247 NEEFLLLTPRTTIEELKN 264



 Score =  130 bits (328), Expect(2) = 3e-63
 Identities = 64/124 (51%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
 Frame = +2

Query: 86  IIVRVVRLWFVSDFNKQNIPFSMEMVLMDDKGDKIHASVRKTLIYKFDKELKEGCVYSIS 265
           ++VRVVR WFV D+  + + FSME+VLMD KGD+I AS+R+TLIYK  ++L+EG V++IS
Sbjct: 1   MVVRVVRAWFVQDYKNKKLSFSMELVLMDRKGDRIGASIRRTLIYKSKEQLQEGMVFTIS 60

Query: 266 NFGVACNGGSFRTTRHDYKLNFQIGTKVLNIDNSFVSCSPFSLV-PFSEINDSYDTNFLI 442
           +F VA N GS+R +R++YKLNF I TKV       V  + +S    +   N+SYD NFL+
Sbjct: 61  SFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTSAYDVFNESYDNNFLV 120

Query: 443 DVMG 454
           DV+G
Sbjct: 121 DVIG 124


>ref|XP_003625877.1| hypothetical protein MTR_7g108280 [Medicago truncatula]
           gi|355500892|gb|AES82095.1| hypothetical protein
           MTR_7g108280 [Medicago truncatula]
          Length = 384

 Score =  145 bits (366), Expect(2) = 8e-60
 Identities = 68/143 (47%), Positives = 104/143 (72%), Gaps = 1/143 (0%)
 Frame = +2

Query: 29  MANRNDPVSAISPAKESWSIIVRVVRLWFVSDFNKQNIPFSMEMVLMDDKGDKIHASVRK 208
           M+ +++ +S +SP K+SW+++VRVVR WF  D+  + +PF ME+VLM+ KGD+I AS+R+
Sbjct: 1   MSTKHNFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRR 60

Query: 209 TLIYKFDKELKEGCVYSISNFGVACNGGSFRTTRHDYKLNFQIGTKVLNIDNSFVSCSPF 388
           TLIYKF ++L+EG V++IS+F VA N GS+R + ++YKL+F I TKV       V  + +
Sbjct: 61  TLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVY 120

Query: 389 SLVPFSEI-NDSYDTNFLIDVMG 454
           S  P   + N+SYD N+L+DV+G
Sbjct: 121 SFTPAPHVFNESYDNNYLVDVIG 143



 Score =  112 bits (280), Expect(2) = 8e-60
 Identities = 64/136 (47%), Positives = 82/136 (60%)
 Frame = +3

Query: 465 GVGTERQYERNGTPVKMNVIELEADGVKIECALFGHYVDDLNSFLATGEIQRPVVILQLA 644
           GVG ER+YER+GT              + +C LFG YV++LNSFL++GE Q  VV + L 
Sbjct: 149 GVGVEREYERDGT-------------YRFKCTLFGEYVEELNSFLSSGESQNAVVAIMLT 195

Query: 645 KVKPFQGKIQLQNAISCTKILFNPECAEVSAFKKRVCHTDDSPSQTLSQLAETPRISLED 824
           KVK FQGK  L+NA S T+I FNPE  E    +K      +SP+  L QL  + RI + +
Sbjct: 196 KVKLFQGKPALRNAFSYTRITFNPEMGETKEIRKSA--NTNSPASGLIQLPNSSRIPVNE 253

Query: 825 EFLSLTQRKTILELKD 872
           EFL LT R TI ELK+
Sbjct: 254 EFLLLTPRTTIEELKN 269