BLASTX nr result

ID: Glycyrrhiza23_contig00020960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020960
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486...   163   3e-38
ref|XP_003540172.1| PREDICTED: double-stranded RNA-binding prote...   153   4e-35
gb|AFK41322.1| unknown [Lotus japonicus]                              129   6e-28
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   124   1e-26
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   119   6e-25

>ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486298|gb|AES67501.1|
           Ribonuclease [Medicago truncatula]
          Length = 408

 Score =  163 bits (413), Expect = 3e-38
 Identities = 94/144 (65%), Positives = 103/144 (71%), Gaps = 1/144 (0%)
 Frame = -3

Query: 708 PQSSALESQGTRPLRFPAAGALPYVPIRQMRSPCQGIAPPVTVRTXXXXXXXXXXXXXXX 529
           PQSSA+ES+ TRPLRFPAAGA PYVPIRQMR PC GIAP V+VRT               
Sbjct: 267 PQSSAIESRVTRPLRFPAAGAPPYVPIRQMR-PCHGIAPAVSVRTVIPVFSAPPLPPPTS 325

Query: 528 XXXXXXXXXXXXXPQVNIRQAVPVFAAPPLRKDEPAPIRKEDLPTSSTPVQQEKLPAKIQ 349
                        P V+IRQAVPVFAAPPLRKDEPAPI+K DLP SSTPV+Q+KLPAKI 
Sbjct: 326 VHQIIRAPPVRIAPPVSIRQAVPVFAAPPLRKDEPAPIQK-DLPASSTPVEQDKLPAKIL 384

Query: 348 EMDKNE-NSPPESETARSLEQLKI 280
           EMDK E NSPP+ ET +SLEQLKI
Sbjct: 385 EMDKTENNSPPQPETLQSLEQLKI 408


>ref|XP_003540172.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  153 bits (386), Expect = 4e-35
 Identities = 82/146 (56%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
 Frame = -3

Query: 714 VPPQSSALESQGTRPLRFPAAGALPYVPIRQMRSPCQGIAPPVTVRTXXXXXXXXXXXXX 535
           +PPQS +LES+ TRPL+F AAGA PYVPIRQMR  CQ IAPPVT+RT             
Sbjct: 266 LPPQSCSLESRATRPLKFRAAGAAPYVPIRQMRPSCQRIAPPVTIRTVVPAFATPPCPPP 325

Query: 534 XXXXXXXXXXXXXXXPQ-VNIRQAVPVFAAPPLRKDEPAPIRKEDLPTSSTPVQQEKLPA 358
                             V IRQAVPV+AAPP +K+EPA ++++DLPT+    QQ+KLP 
Sbjct: 326 ASVPHPAIRAPPVRVAPPVTIRQAVPVYAAPPSKKNEPAAVQQKDLPTAGASGQQDKLPV 385

Query: 357 KIQEMDKNENSPPESETARSLEQLKI 280
           KIQEMDK EN PPESET RSLEQL+I
Sbjct: 386 KIQEMDKAENIPPESETMRSLEQLRI 411


>gb|AFK41322.1| unknown [Lotus japonicus]
          Length = 285

 Score =  129 bits (324), Expect = 6e-28
 Identities = 75/134 (55%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
 Frame = -3

Query: 714 VPPQSSALESQGTRPLRFPAAGALPYVPIRQMRSPCQGIAPPVTVRTXXXXXXXXXXXXX 535
           VPPQSSALES+  RPL+FPAAGA PYVP+RQMRSPC G+APPVTVR              
Sbjct: 88  VPPQSSALESRVFRPLKFPAAGAAPYVPLRQMRSPCHGVAPPVTVRNMVPVFSAPPLPPP 147

Query: 534 XXXXXXXXXXXXXXXPQVNIRQAVPVFAAPPL--RKDEPAPIRKEDLPTSSTPVQQEKLP 361
                          P VNIRQA+PV+AAPP+  RK EP+ I+K DL T S P QQ+ LP
Sbjct: 148 PTVHQVIRAPPVRVAPPVNIRQAIPVYAAPPVPARKGEPSLIQK-DLSTISIPCQQDILP 206

Query: 360 AKIQEMDKNENSPP 319
            KIQE  K ENS P
Sbjct: 207 HKIQETGKAENSLP 220


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
           gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  124 bits (312), Expect = 1e-26
 Identities = 75/148 (50%), Positives = 90/148 (60%), Gaps = 3/148 (2%)
 Frame = -3

Query: 714 VPPQSSALESQGTRPLRFPAAGALPYVPIRQMRSPCQGIAPPVTVRTXXXXXXXXXXXXX 535
           +P  S+  ES+G R  +FPAAGA PYVPIRQMR PCQG+APPVT+RT             
Sbjct: 256 MPQLSATPESRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTIRTAIPVFSPPPAAAA 314

Query: 534 XXXXXXXXXXXXXXXPQVNIRQAVPVFAAPP--LRKDEPAPIRKEDLPTSSTPVQQEKLP 361
                          P V IRQAVPVFA PP  +RKDEP PI K++ PT S P  ++KLP
Sbjct: 315 VSHQVLRAPHVRVAPP-VTIRQAVPVFATPPPPIRKDEPVPIPKDEPPTISAPSPEDKLP 373

Query: 360 AKIQEMD-KNENSPPESETARSLEQLKI 280
           AK  E + K EN PP+ +  +SLEQLKI
Sbjct: 374 AKTPEAETKTENIPPKPDMVKSLEQLKI 401


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  119 bits (298), Expect = 6e-25
 Identities = 75/157 (47%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
 Frame = -3

Query: 714 VPPQSSALESQGTRPLRFPAAGALPYVPIRQMRSPCQGIAPPVTVRTXXXXXXXXXXXXX 535
           +P   +  +S+G R  +FPAAGA PYVPIRQMR PCQG+APPVT+RT             
Sbjct: 256 MPQLPATPDSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTIRTAIPVFSPPPPPAA 314

Query: 534 XXXXXXXXXXXXXXXPQ-VNIRQAVPVFAAPP--LRKDEPAP--------IRKEDLPTSS 388
                             V IRQAVPVFAAPP  +RKDEP P        + K+D PT S
Sbjct: 315 AAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKDEPVPIPKDEPVAVPKDDSPTIS 374

Query: 387 TPVQQEKLPAKIQEMD-KNENSPPESETARSLEQLKI 280
            P  ++KLP K  E + K EN PPE ET +SLEQLKI
Sbjct: 375 APSLEDKLPTKTPETETKTENIPPEPETVQSLEQLKI 411


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