BLASTX nr result

ID: Glycyrrhiza23_contig00020954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020954
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235429.1| uncharacterized protein LOC100500512 [Glycin...    85   1e-14
gb|AFK48522.1| unknown [Lotus japonicus]                               80   5e-13
ref|XP_002872922.1| auxin-responsive family protein [Arabidopsis...    80   5e-13
ref|XP_002318465.1| SAUR family protein [Populus trichocarpa] gi...    80   5e-13
ref|NP_567196.1| SAUR-like auxin-responsive protein [Arabidopsis...    80   5e-13

>ref|NP_001235429.1| uncharacterized protein LOC100500512 [Glycine max]
           gi|255630510|gb|ACU15613.1| unknown [Glycine max]
          Length = 115

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
 Frame = -2

Query: 565 LLGKSFKQVPVTYHHHQHYHDGRRVVTK-------GCVAIKVGQGEDQQRITVPVMYLNH 407
           +LG +FKQVP TY   QH  +GR+ V+K       GC+ IKVGQGE+QQ++TVPV YL H
Sbjct: 1   MLGLNFKQVPQTYDEGQH--EGRQAVSKEDIQIRKGCLKIKVGQGEEQQKVTVPVNYLKH 58

Query: 406 PLFAQLLKEAEE 371
           PLF QLLKEAEE
Sbjct: 59  PLFVQLLKEAEE 70


>gb|AFK48522.1| unknown [Lotus japonicus]
          Length = 106

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = -2

Query: 565 LLGKSFKQVPVTYHHHQHYHDGR-RVVTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQL 389
           +LGKS   + +TYHHH     GR + + KG +AIKVGQG++QQRITVP++YLNHPLF QL
Sbjct: 1   MLGKS---IQLTYHHH-----GRTKEIPKGWLAIKVGQGQEQQRITVPLIYLNHPLFVQL 52

Query: 388 LKEAEE 371
           LKEAEE
Sbjct: 53  LKEAEE 58


>ref|XP_002872922.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318759|gb|EFH49181.1| auxin-responsive family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 35/52 (67%), Positives = 42/52 (80%)
 Frame = -2

Query: 526 HHHQHYHDGRRVVTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQLLKEAEE 371
           HHH+H H+    V KGC+A+KVGQGE+Q+R  +PVMY NHPLF QLLKEAEE
Sbjct: 19  HHHEHDHEK---VPKGCLAVKVGQGEEQERFVIPVMYFNHPLFVQLLKEAEE 67


>ref|XP_002318465.1| SAUR family protein [Populus trichocarpa]
           gi|222859138|gb|EEE96685.1| SAUR family protein [Populus
           trichocarpa]
          Length = 135

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 34/56 (60%), Positives = 44/56 (78%), Gaps = 3/56 (5%)
 Frame = -2

Query: 529 YHHHQHYHDGRRV---VTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQLLKEAEE 371
           +HHH H H G++    + KGC+A+ VGQGE+QQR  +PV+Y+NHPLF QLLKEAEE
Sbjct: 26  HHHHHHDHHGKKQLKDIPKGCLAVMVGQGEEQQRFVIPVIYINHPLFMQLLKEAEE 81


>ref|NP_567196.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|2252854|gb|AAB62852.1| similar to auxin-induced
           protein [Arabidopsis thaliana]
           gi|7267427|emb|CAB80897.1| AT4g00880 [Arabidopsis
           thaliana] gi|17380988|gb|AAL36306.1| unknown protein
           [Arabidopsis thaliana] gi|20466031|gb|AAM20350.1|
           unknown protein [Arabidopsis thaliana]
           gi|332656549|gb|AEE81949.1| SAUR-like auxin-responsive
           protein [Arabidopsis thaliana]
          Length = 122

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 35/52 (67%), Positives = 42/52 (80%)
 Frame = -2

Query: 526 HHHQHYHDGRRVVTKGCVAIKVGQGEDQQRITVPVMYLNHPLFAQLLKEAEE 371
           HHH+H H+    V KGC+A+KVGQGE+Q+R  +PVMY NHPLF QLLKEAEE
Sbjct: 19  HHHEHDHEK---VPKGCLAVKVGQGEEQERFVIPVMYFNHPLFGQLLKEAEE 67


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