BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020943
         (1323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-li...   648   0.0  
ref|XP_003523440.1| PREDICTED: replication factor C subunit 5-li...   645   0.0  
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc...   626   e-177
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   597   e-168
ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|2...   577   e-162

>ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 361

 Score =  648 bits (1672), Expect = 0.0
 Identities = 336/365 (92%), Positives = 348/365 (95%)
 Frame = +2

Query: 104  MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 283
            MA++THPM+ID  D T +A  DKGKSVV   AGNPP AGKAIPWVEKYRPQSLDDVAAHR
Sbjct: 1    MAQTTHPMDID--DHTYTASPDKGKSVVF--AGNPPAAGKAIPWVEKYRPQSLDDVAAHR 56

Query: 284  DIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID 463
            DIV+TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASDDRGID
Sbjct: 57   DIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGID 116

Query: 464  VVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN 643
            VVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN
Sbjct: 117  VVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN 176

Query: 644  HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSNGDMRKA 823
            HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAE LDV+DSGLAA VRLSNGDMRKA
Sbjct: 177  HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKA 236

Query: 824  LNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIKTRKGLA 1003
            LNILQSTHMASQQITE+AVYLCTGNPLPKDIE ISYWLLNEQF DSFKRI E+KTRKGLA
Sbjct: 237  LNILQSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLA 296

Query: 1004 VVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFTRARSAL 1183
            ++DIVREVTMFVFKIKMP AVRVQLMNDLADIEYRL+FGCNDKLQLGSVIASFTRARSAL
Sbjct: 297  LIDIVREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSAL 356

Query: 1184 VAAAT 1198
            VAAAT
Sbjct: 357  VAAAT 361


>ref|XP_003523440.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 363

 Score =  645 bits (1665), Expect = 0.0
 Identities = 334/365 (91%), Positives = 346/365 (94%)
 Frame = +2

Query: 104  MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 283
            MAE+ H M+ID DD T +AR DK KSVVV  A NP  AGKAIPWVEKYRP SLDDVAAHR
Sbjct: 1    MAETNHHMDIDSDDHTYTARPDKAKSVVV--ASNPAAAGKAIPWVEKYRPLSLDDVAAHR 58

Query: 284  DIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID 463
            DIV+TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASDDRGID
Sbjct: 59   DIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGID 118

Query: 464  VVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN 643
            VVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN
Sbjct: 119  VVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN 178

Query: 644  HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSNGDMRKA 823
            HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAE LDV+DSGLAALVRLSNGDMRKA
Sbjct: 179  HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKA 238

Query: 824  LNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIKTRKGLA 1003
            LNILQSTHMASQQITE+ VYLCTGNPLPKDIEQISYWLLNEQF DSFKRI E+KTRKGLA
Sbjct: 239  LNILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLA 298

Query: 1004 VVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFTRARSAL 1183
            +VDIVREVT+FVFKIKMP AVRVQLMNDLADIEYRL+FGCNDKLQLGSVIASF+RARSAL
Sbjct: 299  LVDIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSAL 358

Query: 1184 VAAAT 1198
            VAAAT
Sbjct: 359  VAAAT 363


>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
            gi|355491087|gb|AES72290.1| Replication factor C subunit
            [Medicago truncatula]
          Length = 355

 Score =  626 bits (1615), Expect = e-177
 Identities = 322/364 (88%), Positives = 341/364 (93%)
 Frame = +2

Query: 104  MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 283
            MAE T+ M+ID  D        KGK+V+  AAGNP F GKA  WVEKYRPQSLDDVAAHR
Sbjct: 1    MAEETYAMDIDVTD--------KGKTVI--AAGNPSFGGKASLWVEKYRPQSLDDVAAHR 50

Query: 284  DIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID 463
            DIV+TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID
Sbjct: 51   DIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID 110

Query: 464  VVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN 643
            VVRQQIQDFASTQSLSFGVK SVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN
Sbjct: 111  VVRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN 170

Query: 644  HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSNGDMRKA 823
            HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVI AE LDVQDSGL+ALVRLSNGDMRKA
Sbjct: 171  HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKA 230

Query: 824  LNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIKTRKGLA 1003
            LNILQSTHMASQQITE+AVYLCTGNPLPKDIEQISYWLLNEQ+++SFKRI+++KTRKGLA
Sbjct: 231  LNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLA 290

Query: 1004 VVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFTRARSAL 1183
            ++DIVREVTMFVFKI MP AVRVQL+NDLADIEYRL+FGCNDKLQLGSV+ASFTRARSA+
Sbjct: 291  LIDIVREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAM 350

Query: 1184 VAAA 1195
            VAAA
Sbjct: 351  VAAA 354


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
            gi|302141794|emb|CBI18997.3| unnamed protein product
            [Vitis vinifera]
          Length = 360

 Score =  597 bits (1539), Expect = e-168
 Identities = 312/364 (85%), Positives = 332/364 (91%)
 Frame = +2

Query: 104  MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 283
            MAE+   M+ID +D     + +KGKSVVV   G PP   KA PWVEKYRPQSL DVAAHR
Sbjct: 1    MAEAVTVMDIDEED-NHLLKANKGKSVVV---GGPPDR-KATPWVEKYRPQSLADVAAHR 55

Query: 284  DIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID 463
            DIV+TIDRLT+ENRLPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASDDRGID
Sbjct: 56   DIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGID 115

Query: 464  VVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN 643
            VVRQQIQDFASTQS SFG KSSVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN
Sbjct: 116  VVRQQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN 175

Query: 644  HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSNGDMRKA 823
            HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVI AE+LDV +SGLAALVRLS+GDMRKA
Sbjct: 176  HVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKA 235

Query: 824  LNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIKTRKGLA 1003
            LNILQSTHMASQQITE+AVYLCTGNPLPKDIEQISYWLLNE F  SF RI E+K RKGLA
Sbjct: 236  LNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLA 295

Query: 1004 VVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFTRARSAL 1183
            +VD+VREVTMFVFKIKMP  VRVQL+NDLADIEYRL+FGCNDKLQLGS+IASFTRAR+AL
Sbjct: 296  LVDVVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAAL 355

Query: 1184 VAAA 1195
            VAAA
Sbjct: 356  VAAA 359


>ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|222843952|gb|EEE81499.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  577 bits (1488), Expect = e-162
 Identities = 299/365 (81%), Positives = 328/365 (89%), Gaps = 1/365 (0%)
 Frame = +2

Query: 104  MAESTHPMEIDGDD-LTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAH 280
            MAE+   M+ID ++     ++ +KGK VVV A    P  GKA PWVEKYRPQSL DVAAH
Sbjct: 1    MAEAIALMDIDEEENQNHLSKPNKGKKVVVPAT---PPGGKATPWVEKYRPQSLADVAAH 57

Query: 281  RDIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGI 460
            RDI++TIDRLT+ENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGI
Sbjct: 58   RDIIDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGI 117

Query: 461  DVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIC 640
            DVVR+QIQDFASTQS SFG K+SVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALIC
Sbjct: 118  DVVRKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALIC 177

Query: 641  NHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSNGDMRK 820
            NHVNKIIPALQSRCTRFRFAPLD +HV ERLKHVI+AE LDV +SGL AL  LSNGDMRK
Sbjct: 178  NHVNKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRK 237

Query: 821  ALNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIKTRKGL 1000
            ALNILQSTHMASQQITE+ VYLCTGNPLP+D++QI++WLLNE F +S+KRI EIKTRKGL
Sbjct: 238  ALNILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGL 297

Query: 1001 AVVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFTRARSA 1180
            A+VDIVREVTMFVFKIKM   +RV L+NDLADIEYRL+FGCNDKLQLGS+IASFTRARSA
Sbjct: 298  ALVDIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSA 357

Query: 1181 LVAAA 1195
            LVAAA
Sbjct: 358  LVAAA 362