BLASTX nr result

ID: Glycyrrhiza23_contig00020939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020939
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534528.1| PREDICTED: uncharacterized protein LOC100792...   264   9e-69
gb|ABD28567.1| Homeodomain-like [Medicago truncatula]                 239   2e-61
ref|XP_003624115.1| F-box/kelch-repeat protein [Medicago truncat...   239   2e-61
gb|ABD28572.2| Homeodomain-like, putative [Medicago truncatula]       140   2e-31
gb|AEJ72573.1| putative chromatin remodeling complex subunit [Ma...   127   2e-27

>ref|XP_003534528.1| PREDICTED: uncharacterized protein LOC100792279 [Glycine max]
          Length = 601

 Score =  264 bits (674), Expect = 9e-69
 Identities = 140/196 (71%), Positives = 159/196 (81%), Gaps = 1/196 (0%)
 Frame = +1

Query: 1   VDLNLDADKHPFHLKMRTLVAKSDSTSSRSAIVENQVSQLEFLNSGNTKLISEGKATDDV 180
           VDLNL A+K+P HL+MRTL AK +STSS SAI E+QVS+L+FLNS NT+LISEGKA D V
Sbjct: 151 VDLNLGAEKYPLHLRMRTLGAKLESTSSSSAIAEDQVSELDFLNSRNTQLISEGKAIDGV 210

Query: 181 CLSITQPQSAGCMMLDDRMNVQQTKTNQPNHTPIISLALGLSLPVELKTGGCDSNNCLSA 360
           C S TQPQ    MM ++RMNVQ TKT+QP   P+ISL+LGLSLP+E KTG  DS N LS 
Sbjct: 211 CSSSTQPQ---LMMSEERMNVQHTKTDQPKLMPVISLSLGLSLPMEHKTGCSDSVNSLSV 267

Query: 361 LPLLNSTTETREIVQDGLC-QSSTNRKPLLLRHKVVLDNIVNKARALNERGNFQENLKPH 537
           L L NSTTE R+IVQDG C  SS NR+ LL RH+VVLDNIV++ RALNERGNFQE LKPH
Sbjct: 268 LSLSNSTTEARDIVQDGFCWSSSVNRRSLLPRHQVVLDNIVHRTRALNERGNFQEYLKPH 327

Query: 538 PIMWSEEELDFLWIGV 585
           PIMWSEEELDFLWIGV
Sbjct: 328 PIMWSEEELDFLWIGV 343


>gb|ABD28567.1| Homeodomain-like [Medicago truncatula]
          Length = 906

 Score =  239 bits (611), Expect = 2e-61
 Identities = 130/195 (66%), Positives = 142/195 (72%)
 Frame = +1

Query: 1   VDLNLDADKHPFHLKMRTLVAKSDSTSSRSAIVENQVSQLEFLNSGNTKLISEGKATDDV 180
           V++NL +DKH   L MRTL+AKSDSTSSRS IVENQV+QL FLNS NTK+ISEGK  DDV
Sbjct: 463 VEVNLGSDKHSLPLAMRTLLAKSDSTSSRSVIVENQVTQLAFLNSSNTKVISEGKTIDDV 522

Query: 181 CLSITQPQSAGCMMLDDRMNVQQTKTNQPNHTPIISLALGLSLPVELKTGGCDSNNCLSA 360
           C SITQ QS                       P +SL+LGLSLPVE +T GC     LS 
Sbjct: 523 CSSITQSQS--------------------EQMPTVSLSLGLSLPVEHETRGC-----LST 557

Query: 361 LPLLNSTTETREIVQDGLCQSSTNRKPLLLRHKVVLDNIVNKARALNERGNFQENLKPHP 540
           LPL N T+ TR+IVQDGLCQSSTNRKPL LRHK VLDNIV+K RA NERG FQEN KPHP
Sbjct: 558 LPLFNLTSGTRDIVQDGLCQSSTNRKPLHLRHKAVLDNIVSKTRASNERGKFQENYKPHP 617

Query: 541 IMWSEEELDFLWIGV 585
           IMWSEEELDFLWIGV
Sbjct: 618 IMWSEEELDFLWIGV 632


>ref|XP_003624115.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355499130|gb|AES80333.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 1144

 Score =  239 bits (611), Expect = 2e-61
 Identities = 130/195 (66%), Positives = 142/195 (72%)
 Frame = +1

Query: 1   VDLNLDADKHPFHLKMRTLVAKSDSTSSRSAIVENQVSQLEFLNSGNTKLISEGKATDDV 180
           V++NL +DKH   L MRTL+AKSDSTSSRS IVENQV+QL FLNS NTK+ISEGK  DDV
Sbjct: 463 VEVNLGSDKHSLPLAMRTLLAKSDSTSSRSVIVENQVTQLAFLNSSNTKVISEGKTIDDV 522

Query: 181 CLSITQPQSAGCMMLDDRMNVQQTKTNQPNHTPIISLALGLSLPVELKTGGCDSNNCLSA 360
           C SITQ QS                       P +SL+LGLSLPVE +T GC     LS 
Sbjct: 523 CSSITQSQS--------------------EQMPTVSLSLGLSLPVEHETRGC-----LST 557

Query: 361 LPLLNSTTETREIVQDGLCQSSTNRKPLLLRHKVVLDNIVNKARALNERGNFQENLKPHP 540
           LPL N T+ TR+IVQDGLCQSSTNRKPL LRHK VLDNIV+K RA NERG FQEN KPHP
Sbjct: 558 LPLFNLTSGTRDIVQDGLCQSSTNRKPLHLRHKAVLDNIVSKTRASNERGKFQENYKPHP 617

Query: 541 IMWSEEELDFLWIGV 585
           IMWSEEELDFLWIGV
Sbjct: 618 IMWSEEELDFLWIGV 632


>gb|ABD28572.2| Homeodomain-like, putative [Medicago truncatula]
          Length = 119

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/114 (63%), Positives = 87/114 (76%)
 Frame = +1

Query: 217 MMLDDRMNVQQTKTNQPNHTPIISLALGLSLPVELKTGGCDSNNCLSALPLLNSTTETRE 396
           M+LD R++VQQTKT+QP H P I+L+LGLSLP + +T G DS +CLS L LLNST   ++
Sbjct: 1   MVLDKRIDVQQTKTSQPRHMPRITLSLGLSLPKQPETRGFDSTSCLSTLFLLNSTIVPQD 60

Query: 397 IVQDGLCQSSTNRKPLLLRHKVVLDNIVNKARALNERGNFQENLKPHPIMWSEE 558
           +V DG CQSS N K LLLRHKVVLDNIV K+RAL ER + QEN +PHPI   EE
Sbjct: 61  VVHDGFCQSSANLKLLLLRHKVVLDNIVRKSRALKERRSLQENFEPHPIRSVEE 114


>gb|AEJ72573.1| putative chromatin remodeling complex subunit [Malus x domestica]
          Length = 823

 Score =  127 bits (318), Expect = 2e-27
 Identities = 87/240 (36%), Positives = 118/240 (49%), Gaps = 46/240 (19%)
 Frame = +1

Query: 4    DLNLDADKHPFHLKMRTLVAKSDSTS-----------------SRSAIVENQVSQL---- 120
            DLNL   + P     +T+    DSTS                 +R+  VE Q SQL    
Sbjct: 313  DLNLSPQQQPNIAAPKTMGGSLDSTSRNHAAVLHELSPPQMLAARNERVETQASQLHRDA 372

Query: 121  -EFLNSGNT-----------------------KLISEGKATDDVCLSITQPQSAGCMMLD 228
             EFL  G +                        L  E K +D  C  ITQP+ A  +  +
Sbjct: 373  FEFLEVGASCKDNDDKVGPLIPEEFTSENKCLPLFPEEKTSDIFCPMITQPEVAASIASE 432

Query: 229  DRMNVQQT-KTNQPNHTPIISLALGLSLPVELKTGGCDSNNCLSALPLLNSTTETREIVQ 405
             R  +Q   + NQP       + LGLSL  +    GC +N C +  P LNS   TRE ++
Sbjct: 433  RRKVLQLGGQNNQPKQGS--PMFLGLSLTEKPVLAGCAANTCFNTSPFLNSIIGTREFIR 490

Query: 406  DGLCQSSTNRKPLLLRHKVVLDNIVNKARALNERGNFQENLKPHPIMWSEEELDFLWIGV 585
            D   QSS++R   +L+HK++ D++V++ARALNERG+F +N  PH  MWSEEELDFLW+GV
Sbjct: 491  DAALQSSSSRLSSVLKHKIMHDSVVSQARALNERGSFHDNYMPHNTMWSEEELDFLWMGV 550


Top