BLASTX nr result

ID: Glycyrrhiza23_contig00020936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020936
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex...   368   2e-99
ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [M...   365   1e-98
gb|AFK40144.1| unknown [Lotus japonicus]                              361   2e-97
ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex...   360   3e-97
ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex...   324   3e-86

>ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like
           [Glycine max]
          Length = 324

 Score =  368 bits (944), Expect = 2e-99
 Identities = 183/196 (93%), Positives = 189/196 (96%)
 Frame = +3

Query: 3   VLGAPLRVILKHLASRTVAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIV 182
           VLGAPLRVIL+HLA+RTVA DMDPLVALVHRP ESFFLFPQADKVTVVYPMRFNDSIDIV
Sbjct: 129 VLGAPLRVILEHLAARTVALDMDPLVALVHRPNESFFLFPQADKVTVVYPMRFNDSIDIV 188

Query: 183 LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEG 362
           LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELK V ADALSANAGFV+FVIFPRHVEG
Sbjct: 189 LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKEVPADALSANAGFVTFVIFPRHVEG 248

Query: 363 QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPDPENSKKPSYNR 542
           QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQAL+RAKPD ENSKK SYNR
Sbjct: 249 QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALNRAKPDAENSKKTSYNR 308

Query: 543 SFKRMSLKDSRTNSFS 590
           SFKR+ LK+SRTNSFS
Sbjct: 309 SFKRLGLKESRTNSFS 324


>ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [Medicago truncatula]
           gi|355522987|gb|AET03441.1| Actin-related protein 2/3
           complex subunit [Medicago truncatula]
          Length = 375

 Score =  365 bits (936), Expect = 1e-98
 Identities = 181/196 (92%), Positives = 189/196 (96%)
 Frame = +3

Query: 3   VLGAPLRVILKHLASRTVAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIV 182
           VLGAPLRVILKHLASR VAPDMDPLVALVHRPKESFF+FPQADKVTV+YPMRFNDSIDIV
Sbjct: 180 VLGAPLRVILKHLASRNVAPDMDPLVALVHRPKESFFVFPQADKVTVMYPMRFNDSIDIV 239

Query: 183 LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEG 362
           LATSFLQEFVEARRTAGLNNTPPCSWS TPP ELKGVS DALSANAGFVSFVIFPRHVEG
Sbjct: 240 LATSFLQEFVEARRTAGLNNTPPCSWSHTPPPELKGVSTDALSANAGFVSFVIFPRHVEG 299

Query: 363 QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPDPENSKKPSYNR 542
            KLDRTVW+LSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQAL RAKPDPE+SKK S++R
Sbjct: 300 PKLDRTVWSLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALGRAKPDPESSKKTSHSR 359

Query: 543 SFKRMSLKDSRTNSFS 590
           SF+RMSLK+SRTNSFS
Sbjct: 360 SFQRMSLKESRTNSFS 375


>gb|AFK40144.1| unknown [Lotus japonicus]
          Length = 324

 Score =  361 bits (926), Expect = 2e-97
 Identities = 179/196 (91%), Positives = 188/196 (95%)
 Frame = +3

Query: 3   VLGAPLRVILKHLASRTVAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIV 182
           VLGAPLRVILKHLASRTVAPDMDP+VALVHRPKESFFL PQADKVTVVYPMRFNDSID+V
Sbjct: 129 VLGAPLRVILKHLASRTVAPDMDPVVALVHRPKESFFLLPQADKVTVVYPMRFNDSIDMV 188

Query: 183 LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEG 362
           LATSFLQEFVEARRTAGL+NTPPCSWS TPPLELK + ADALSANAGFVSFVIFPRHVEG
Sbjct: 189 LATSFLQEFVEARRTAGLSNTPPCSWSHTPPLELKELPADALSANAGFVSFVIFPRHVEG 248

Query: 363 QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPDPENSKKPSYNR 542
            KLDRTVW+LSTFHAYVSYHVKCSEGFMHTRMRRRVE+LIQALDRAKP+PE+SKK S NR
Sbjct: 249 PKLDRTVWSLSTFHAYVSYHVKCSEGFMHTRMRRRVETLIQALDRAKPEPEDSKKTSNNR 308

Query: 543 SFKRMSLKDSRTNSFS 590
           SFKR+SLKDSR NSFS
Sbjct: 309 SFKRLSLKDSRVNSFS 324


>ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex subunit 2 [Glycine
           max]
          Length = 320

 Score =  360 bits (925), Expect = 3e-97
 Identities = 181/196 (92%), Positives = 187/196 (95%)
 Frame = +3

Query: 3   VLGAPLRVILKHLASRTVAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIV 182
           VLGAPLRVIL+HLA+RTVAPD+DPLVALVHRP ESFFLFPQADKVTVVYPMRFNDSIDIV
Sbjct: 129 VLGAPLRVILEHLAARTVAPDLDPLVALVHRPNESFFLFPQADKVTVVYPMRFNDSIDIV 188

Query: 183 LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEG 362
           LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELK V A    ANAGFV+FVIFPRHVEG
Sbjct: 189 LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKEVPA----ANAGFVTFVIFPRHVEG 244

Query: 363 QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPDPENSKKPSYNR 542
           QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQAL+RAKPD ENSKK SYNR
Sbjct: 245 QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALNRAKPDVENSKKTSYNR 304

Query: 543 SFKRMSLKDSRTNSFS 590
           SFKR+SLKDSRTNSFS
Sbjct: 305 SFKRLSLKDSRTNSFS 320


>ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex subunit 2 isoform 1
           [Vitis vinifera] gi|297737660|emb|CBI26861.3| unnamed
           protein product [Vitis vinifera]
          Length = 328

 Score =  324 bits (830), Expect = 3e-86
 Identities = 162/198 (81%), Positives = 177/198 (89%)
 Frame = +3

Query: 3   VLGAPLRVILKHLASRTVAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIV 182
           VLGAPLRV+LKHLASRTVAPD++   ALVHRPKESFFL PQA+KVTVV+PMRF DSID V
Sbjct: 129 VLGAPLRVVLKHLASRTVAPDINRPFALVHRPKESFFLVPQAEKVTVVFPMRFKDSIDTV 188

Query: 183 LATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEG 362
           LATSFLQEFVEARRTAGLNN PPC WS +PPLEL+G + +ALSANAGFV+FVIFPRHVEG
Sbjct: 189 LATSFLQEFVEARRTAGLNNAPPCLWSPSPPLELRGTAGEALSANAGFVTFVIFPRHVEG 248

Query: 363 QKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPDPENSKKPSYNR 542
           +KLDRTVW+LSTF AYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPD E SKK    R
Sbjct: 249 KKLDRTVWSLSTFRAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPDLEKSKKTVQGR 308

Query: 543 SFKRMSLKDSRTNSFS*R 596
           SFKR+SLK++ TNS S R
Sbjct: 309 SFKRLSLKEAHTNSNSQR 326


Top