BLASTX nr result

ID: Glycyrrhiza23_contig00020929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020929
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...    78   8e-13
ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote...    77   2e-12
ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional ...    75   5e-12
gb|ABY75165.1| RNA binding protein [Arachis diogoi]                    74   9e-12
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...    73   2e-11

>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 401

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/54 (66%), Positives = 40/54 (74%)
 Frame = -1

Query: 387 QFRMDFGNPRSGAYYGAPIYDGYGYALPPPHDPSMXXXXXXXXXXXXGHQQQVS 226
           QFRMDFG+P +GAYYGAP+YDGYGYALPP HDPS+            GHQQQVS
Sbjct: 348 QFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPSIYAAAYGAYPLYGGHQQQVS 401


>ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Glycine max]
          Length = 425

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/54 (66%), Positives = 39/54 (72%)
 Frame = -1

Query: 387 QFRMDFGNPRSGAYYGAPIYDGYGYALPPPHDPSMXXXXXXXXXXXXGHQQQVS 226
           QFRMDFGNP +GAYYGAP+YDGYGYAL P HDPS+            GHQQQVS
Sbjct: 372 QFRMDFGNPWTGAYYGAPMYDGYGYALTPRHDPSIYAAAYGAYPLYGGHQQQVS 425


>ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 410

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/54 (64%), Positives = 37/54 (68%)
 Frame = -1

Query: 387 QFRMDFGNPRSGAYYGAPIYDGYGYALPPPHDPSMXXXXXXXXXXXXGHQQQVS 226
           QFR DFGN  SGAYYG P+YDGYGYALPP HDPS+            GHQQQVS
Sbjct: 357 QFRADFGNAWSGAYYGGPVYDGYGYALPPSHDPSIYAAAYGAYPIYGGHQQQVS 410


>gb|ABY75165.1| RNA binding protein [Arachis diogoi]
          Length = 142

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/55 (65%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -1

Query: 387 QFRMDFG-NPRSGAYYGAPIYDGYGYALPPPHDPSMXXXXXXXXXXXXGHQQQVS 226
           QFRMDFG N  SG YYGAP+YDGYGYALPPPHDPS+            GHQQQV+
Sbjct: 88  QFRMDFGGNHWSGTYYGAPVYDGYGYALPPPHDPSIYAAAYAAYPIYGGHQQQVN 142


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 409

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/54 (61%), Positives = 35/54 (64%)
 Frame = -1

Query: 387 QFRMDFGNPRSGAYYGAPIYDGYGYALPPPHDPSMXXXXXXXXXXXXGHQQQVS 226
           Q R DFGN  SGAYYG  +YDGYGYALPPPHDP+M             HQQQVS
Sbjct: 356 QMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQVS 409


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