BLASTX nr result

ID: Glycyrrhiza23_contig00020920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020920
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB...   210   1e-52
ref|XP_003612528.1| Alkylated DNA repair protein alkB-like prote...   198   3e-49
ref|XP_002304398.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
emb|CBI29214.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB...   166   2e-39

>ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Glycine max]
          Length = 342

 Score =  210 bits (534), Expect = 1e-52
 Identities = 102/117 (87%), Positives = 110/117 (94%)
 Frame = +1

Query: 1   LPSFVSPILERISTCPTFKNVDSIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLS 180
           LPSFVSPIL+RIS+CPTF+NV +IVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLS
Sbjct: 176 LPSFVSPILDRISSCPTFENVKNIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLS 235

Query: 181 GPCIMEFRQYGNGDCFPKVASSDVTKVESPEDDSNFIRRAIYLPPRSLLLLSGEARY 351
           GPCIMEFR+Y NGD  P+VASS V K+E+PED SNFIRRAIYLPPRSLLLLSGEARY
Sbjct: 236 GPCIMEFRRYENGDWLPRVASSAVAKIENPEDQSNFIRRAIYLPPRSLLLLSGEARY 292


>ref|XP_003612528.1| Alkylated DNA repair protein alkB-like protein [Medicago
           truncatula] gi|355513863|gb|AES95486.1| Alkylated DNA
           repair protein alkB-like protein [Medicago truncatula]
          Length = 344

 Score =  198 bits (504), Expect = 3e-49
 Identities = 100/119 (84%), Positives = 108/119 (90%), Gaps = 2/119 (1%)
 Frame = +1

Query: 1   LPSFVSPILERISTCPTFKNVDS--IVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLS 174
           LPSF+SPILERIS+CPTFKN D   IVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLS
Sbjct: 176 LPSFLSPILERISSCPTFKNADPDRIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLS 235

Query: 175 LSGPCIMEFRQYGNGDCFPKVASSDVTKVESPEDDSNFIRRAIYLPPRSLLLLSGEARY 351
           L+GPCIMEFR+YG+GD  P+VASS  TKV+ PED SN I+RAIYLPPRSLLLLSGEARY
Sbjct: 236 LAGPCIMEFRRYGDGDWRPRVASSIDTKVDCPEDGSNCIKRAIYLPPRSLLLLSGEARY 294


>ref|XP_002304398.1| predicted protein [Populus trichocarpa] gi|222841830|gb|EEE79377.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/117 (71%), Positives = 97/117 (82%)
 Frame = +1

Query: 1   LPSFVSPILERISTCPTFKNVDSIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLS 180
           LPSFVS +LERIS  P   +  SI+LDQLTVNEYPPGVGLSPHIDTHSAFE LIFSLSL+
Sbjct: 178 LPSFVSSVLERISLFPGLNSSTSILLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLA 237

Query: 181 GPCIMEFRQYGNGDCFPKVASSDVTKVESPEDDSNFIRRAIYLPPRSLLLLSGEARY 351
           GPCIMEFR+Y +G   P  ASS  TKVE+ ++ SN +RR++YLPPRS+LLLSGEARY
Sbjct: 238 GPCIMEFRRYLDGSWVPDAASSAYTKVENVDNCSNLVRRSLYLPPRSILLLSGEARY 294


>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  166 bits (419), Expect = 2e-39
 Identities = 84/117 (71%), Positives = 96/117 (82%)
 Frame = +1

Query: 1    LPSFVSPILERISTCPTFKNVDSIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLS 180
            LPSFVS I+ERIS+ P  ++   IVLDQLTVNEYPPGVGLSPHIDTHSAFE  IFSLSL+
Sbjct: 747  LPSFVSAIVERISSFPNLESAADIVLDQLTVNEYPPGVGLSPHIDTHSAFEGFIFSLSLA 806

Query: 181  GPCIMEFRQYGNGDCFPKVASSDVTKVESPEDDSNFIRRAIYLPPRSLLLLSGEARY 351
            GPCIM+FR+Y  G  +PK ASS    VE P+  S+F+RRAIYLPPRS+LLLSGEARY
Sbjct: 807  GPCIMDFRRYTEG-VWPKSASSSDMSVEYPDKSSSFLRRAIYLPPRSMLLLSGEARY 862


>ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Vitis
           vinifera]
          Length = 349

 Score =  166 bits (419), Expect = 2e-39
 Identities = 84/117 (71%), Positives = 96/117 (82%)
 Frame = +1

Query: 1   LPSFVSPILERISTCPTFKNVDSIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLS 180
           LPSFVS I+ERIS+ P  ++   IVLDQLTVNEYPPGVGLSPHIDTHSAFE  IFSLSL+
Sbjct: 184 LPSFVSAIVERISSFPNLESAADIVLDQLTVNEYPPGVGLSPHIDTHSAFEGFIFSLSLA 243

Query: 181 GPCIMEFRQYGNGDCFPKVASSDVTKVESPEDDSNFIRRAIYLPPRSLLLLSGEARY 351
           GPCIM+FR+Y  G  +PK ASS    VE P+  S+F+RRAIYLPPRS+LLLSGEARY
Sbjct: 244 GPCIMDFRRYTEG-VWPKSASSSDMSVEYPDKSSSFLRRAIYLPPRSMLLLSGEARY 299


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