BLASTX nr result

ID: Glycyrrhiza23_contig00020907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020907
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   415   e-113
ref|NP_001241941.1| uncharacterized protein LOC100790543 [Glycin...   401   e-109
ref|XP_003621540.1| RING finger protein [Medicago truncatula] gi...   399   e-109
gb|AFK44484.1| unknown [Medicago truncatula]                          397   e-108
ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycin...   395   e-108

>ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 227

 Score =  415 bits (1067), Expect = e-113
 Identities = 197/227 (86%), Positives = 212/227 (93%), Gaps = 2/227 (0%)
 Frame = +3

Query: 513  MGSICSCLSVDDFEDYMNPDSHVYRNCVCLSCFLQNLLNVYESIFRRGEVHSIPSSIQGA 692
            MG++C C +VDDFEDYMNP+S VYRNC+CLSCF+QN L VYESIFRRGEVH+IPSSIQGA
Sbjct: 1    MGAVCCCFNVDDFEDYMNPNSSVYRNCMCLSCFVQNFLTVYESIFRRGEVHAIPSSIQGA 60

Query: 693  ASMTSTASLDNSLSDMYRSPPRPMPYDADPRYFRSQHDGLISRREKGSSHLNEESEPLRG 872
            ASMTSTASLDNSLSDMYRSPPRP+PYDADPR+FRSQ +GL+SRREKGSSHLNEESEPLRG
Sbjct: 61   ASMTSTASLDNSLSDMYRSPPRPLPYDADPRFFRSQREGLVSRREKGSSHLNEESEPLRG 120

Query: 873  DI--DSESLNSSDKWNECAGEDGSKEYRSKSLVRLSSAKLTTGAGLVYASSEEEDCCPTC 1046
            D+  DSESLNS  KWN+   EDGSKEYRSKS VRLSSAKLTTGAG+VY+SSEEED CPTC
Sbjct: 121  DVDADSESLNSGGKWND-TSEDGSKEYRSKSSVRLSSAKLTTGAGVVYSSSEEEDVCPTC 179

Query: 1047 LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 1187
            LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT
Sbjct: 180  LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 226


>ref|NP_001241941.1| uncharacterized protein LOC100790543 [Glycine max]
            gi|255641258|gb|ACU20906.1| unknown [Glycine max]
          Length = 226

 Score =  401 bits (1030), Expect = e-109
 Identities = 192/227 (84%), Positives = 210/227 (92%), Gaps = 2/227 (0%)
 Frame = +3

Query: 513  MGSICSCLSVDDFEDYMNPDSHVYRNCVCLSCFLQNLLNVYESIFRRGEVHSIPSSIQGA 692
            MG++C C +VDDFED+MNP+S VYRNC+CLSCF+QN   +YESIFRRGEVH+IPSSIQGA
Sbjct: 1    MGAVCCCFNVDDFEDFMNPNSSVYRNCMCLSCFVQNFFTMYESIFRRGEVHAIPSSIQGA 60

Query: 693  ASMTSTASLDNSLSDMYRSPPRPMPYDADPRYFRSQHDGLISRREKGSSHLNEESEPLRG 872
            ASMTSTASLDNSLSDMYRSPPRP+PYDAD R+FRSQ DGL+SRREKGSSHLNEESEPLRG
Sbjct: 61   ASMTSTASLDNSLSDMYRSPPRPLPYDAD-RFFRSQRDGLVSRREKGSSHLNEESEPLRG 119

Query: 873  DID--SESLNSSDKWNECAGEDGSKEYRSKSLVRLSSAKLTTGAGLVYASSEEEDCCPTC 1046
            D+D  SESLNS+ KWN+ + EDGSKEYRSKS VRLSSAKLTTGAG+VY+SSEEED CPTC
Sbjct: 120  DVDADSESLNSAGKWNDTS-EDGSKEYRSKSTVRLSSAKLTTGAGVVYSSSEEEDVCPTC 178

Query: 1047 LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 1187
            LEEYTEENPKIVTKCSHHFHL CIYEWMER DSCPVCGKVMVFDETT
Sbjct: 179  LEEYTEENPKIVTKCSHHFHLCCIYEWMERGDSCPVCGKVMVFDETT 225


>ref|XP_003621540.1| RING finger protein [Medicago truncatula] gi|217073256|gb|ACJ84987.1|
            unknown [Medicago truncatula] gi|355496555|gb|AES77758.1|
            RING finger protein [Medicago truncatula]
          Length = 227

 Score =  399 bits (1025), Expect = e-109
 Identities = 187/226 (82%), Positives = 207/226 (91%), Gaps = 2/226 (0%)
 Frame = +3

Query: 513  MGSICSCLSVDDFEDYMNPDSHVYRNCVCLSCFLQNLLNVYESIFRRGEVHSIPSSIQGA 692
            MGSICSCLSVDDFEDYMNP SHVYRNCVC+ CFLQN+  VY SIF R E+ ++PSS+QGA
Sbjct: 1    MGSICSCLSVDDFEDYMNPHSHVYRNCVCVGCFLQNISAVYSSIFHRREMQALPSSVQGA 60

Query: 693  ASMTSTASLDNSLSDMYRSPPRPMPYDADPRYFRSQHDGLISRREKGSSHLNEESEPLR- 869
            ASMT+TASLDNSL+++YRSPPRP+PYDADPR+FRSQHDGL+SRREKGSSHLNEESEPLR 
Sbjct: 61   ASMTNTASLDNSLAEIYRSPPRPLPYDADPRHFRSQHDGLVSRREKGSSHLNEESEPLRV 120

Query: 870  -GDIDSESLNSSDKWNECAGEDGSKEYRSKSLVRLSSAKLTTGAGLVYASSEEEDCCPTC 1046
              D+D ESL+SS KW E  G+DGSKEYRSKS VRLSSAKLTTGA LVYASSEEED CPTC
Sbjct: 121  DVDVDPESLSSSGKWKESTGKDGSKEYRSKSSVRLSSAKLTTGAALVYASSEEEDVCPTC 180

Query: 1047 LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDET 1184
            LEEYTEENPKIVTKC+HH+HLGCIYEWMERSDSCPVCGKVM+FDE+
Sbjct: 181  LEEYTEENPKIVTKCNHHYHLGCIYEWMERSDSCPVCGKVMLFDES 226


>gb|AFK44484.1| unknown [Medicago truncatula]
          Length = 227

 Score =  397 bits (1021), Expect = e-108
 Identities = 186/226 (82%), Positives = 206/226 (91%), Gaps = 2/226 (0%)
 Frame = +3

Query: 513  MGSICSCLSVDDFEDYMNPDSHVYRNCVCLSCFLQNLLNVYESIFRRGEVHSIPSSIQGA 692
            MGSICSCLSVDDFEDYMNP SHVYRNCVC+ CFLQN+  VY SIF R E+ ++PSS+QGA
Sbjct: 1    MGSICSCLSVDDFEDYMNPHSHVYRNCVCVGCFLQNISAVYSSIFHRREMQALPSSVQGA 60

Query: 693  ASMTSTASLDNSLSDMYRSPPRPMPYDADPRYFRSQHDGLISRREKGSSHLNEESEPLR- 869
            ASMT+TASLDNSL+++YRSPPRP+PYDADPR+FRSQHDGL+SRREKGSSHLNEESEPLR 
Sbjct: 61   ASMTNTASLDNSLAEIYRSPPRPLPYDADPRHFRSQHDGLVSRREKGSSHLNEESEPLRV 120

Query: 870  -GDIDSESLNSSDKWNECAGEDGSKEYRSKSLVRLSSAKLTTGAGLVYASSEEEDCCPTC 1046
              D+D ESL+SS KW E  G+DGSKEYRSKS VRLSSAKLTTGA LVYASSEEED CPTC
Sbjct: 121  DVDVDPESLSSSGKWKESTGKDGSKEYRSKSSVRLSSAKLTTGAALVYASSEEEDVCPTC 180

Query: 1047 LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDET 1184
            LEEYTEENPKIVTKC+HH+H GCIYEWMERSDSCPVCGKVM+FDE+
Sbjct: 181  LEEYTEENPKIVTKCNHHYHFGCIYEWMERSDSCPVCGKVMLFDES 226


>ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycine max]
            gi|255647555|gb|ACU24241.1| unknown [Glycine max]
          Length = 229

 Score =  395 bits (1016), Expect = e-108
 Identities = 186/227 (81%), Positives = 203/227 (89%), Gaps = 2/227 (0%)
 Frame = +3

Query: 513  MGSICSCLSVDDFEDYMNPDSHVYRNCVCLSCFLQNLLNVYESIFRRGEVHSIPSSIQGA 692
            MGS+C CLS DDFEDY+NP+S VYRNCVCLSC +QNLL+VY SIFRRG+ HSIPSSIQGA
Sbjct: 1    MGSVCCCLSFDDFEDYVNPNSPVYRNCVCLSCLIQNLLSVYSSIFRRGDAHSIPSSIQGA 60

Query: 693  ASMTSTASLDNSLSDMYRSPPRPMPYDADPRYFRSQHDGLISRREKGSSHLNEESEPLR- 869
            AS+TS ASLDNSLSDMYRSPPRP+PYDA+PRYFRSQ DGL+SRREKGSSH NEE+EPLR 
Sbjct: 61   ASITSAASLDNSLSDMYRSPPRPLPYDAEPRYFRSQRDGLVSRREKGSSHSNEETEPLRS 120

Query: 870  -GDIDSESLNSSDKWNECAGEDGSKEYRSKSLVRLSSAKLTTGAGLVYASSEEEDCCPTC 1046
              D+D ESLNS DKWNE A E GSKEY SKS +RL S K +TG GLVYASSEEED CPTC
Sbjct: 121  DADLDPESLNSGDKWNESACEAGSKEYHSKSSLRLQSTKYSTGVGLVYASSEEEDVCPTC 180

Query: 1047 LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 1187
            LEEYT+ENPKI+TKCSHHFHLGCIYEWMERSD+CPVCGKVMVFDETT
Sbjct: 181  LEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDETT 227


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