BLASTX nr result
ID: Glycyrrhiza23_contig00020883
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00020883
(507 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi... 282 2e-74
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi... 279 1e-73
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi... 175 4e-42
emb|CBI35666.3| unnamed protein product [Vitis vinifera] 175 4e-42
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera] 174 7e-42
>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 282 bits (721), Expect = 2e-74
Identities = 136/168 (80%), Positives = 153/168 (91%)
Frame = +3
Query: 3 QLENLHLTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNR 182
Q+ENLHL SLAKQG LREVHEFIR+MD+ GI+I+ RSYEYLFKMCG LGALSDGKLFHNR
Sbjct: 58 QVENLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNR 117
Query: 183 LQRMANSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAI 362
LQRMANSNKFIDNCIL+MYCDCKSFT+AERFFD++VD DL SW+ IISAY E+G +DEA+
Sbjct: 118 LQRMANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAV 177
Query: 363 RLLLRMLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIRIGFTA 506
RL LRMLDLGI P+SSIF TL+ SF+DPSML+LGKQIHSQLIRIGF A
Sbjct: 178 RLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAA 225
Score = 56.2 bits (134), Expect = 3e-06
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Frame = +3
Query: 21 LTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFH-NRLQRMA 197
+ + G+ E +++ G+ ++S Y +F+ C + L G H + +++
Sbjct: 366 IAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGL 425
Query: 198 NSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLR 377
+ ++ ++ MY C A + F + D +W II A+A G EA+RL
Sbjct: 426 VAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKE 485
Query: 378 MLDLGIVPSSSIFCTLLGSFSDPSMLELGKQI 473
M G+ P++ F LL + S +++ GK+I
Sbjct: 486 MQGSGVRPNAVTFIGLLNACSHSGLVKEGKKI 517
>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 279 bits (714), Expect = 1e-73
Identities = 137/168 (81%), Positives = 152/168 (90%)
Frame = +3
Query: 3 QLENLHLTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNR 182
Q+ENLHL SLAKQGKLR+VHEFIR+MD AGI+I+ RSYEYLFKMCG LGALSDGKLFHNR
Sbjct: 46 QVENLHLISLAKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNR 105
Query: 183 LQRMANSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAI 362
LQRMANSNKFIDNCILQMYCDCKSFTAAERFFD++VD DL SWA IISAY E+G +DEA+
Sbjct: 106 LQRMANSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAV 165
Query: 363 RLLLRMLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIRIGFTA 506
L LRMLDLGI+P+ SIF TL+ SF+DPSML+LGKQIHSQLIRI F A
Sbjct: 166 GLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAA 213
>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Vitis vinifera]
Length = 835
Score = 175 bits (443), Expect = 4e-42
Identities = 85/169 (50%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
Frame = +3
Query: 3 QLENLHLTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNR 182
+LENLHL SL+KQGKL+E H+F++ MD+A +++ SY+ LF+ CG L +L+DG+L H+R
Sbjct: 53 KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112
Query: 183 LQR-MANSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEA 359
L+R + N + I+NC+L+MYCDC S ++ FDEM+ +L SW I+ISAYA+ G +++A
Sbjct: 113 LRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA 172
Query: 360 IRLLLRMLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIRIGFTA 506
IRL M GI P+S+++ +LL S PS LELGKQIHS +IR A
Sbjct: 173 IRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNA 221
Score = 66.2 bits (160), Expect = 3e-09
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Frame = +3
Query: 21 LTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFH-NRLQRMA 197
++ ++ G+L + + S+ G+ ++S Y +F+ C L+ G H + ++R
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421
Query: 198 NSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLR 377
S + ++ ++ MY C A R F+ + + D +W IIS YA G+ EA+ R
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 378 MLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIR 491
M G+ P++ F +L + S ++ KQ + R
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSR 519
Score = 65.1 bits (157), Expect = 6e-09
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Frame = +3
Query: 21 LTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNRLQR-MA 197
+++ AK G+L + M +GI +S Y L + C L GK H+ + R
Sbjct: 160 ISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQL 219
Query: 198 NSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLR 377
N+N ++ I MY C A+ FD M + +W ++ Y + ++ A+ L R
Sbjct: 220 NANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFAR 279
Query: 378 MLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIRIG 497
M G+ +F +L ++G+QIHS ++++G
Sbjct: 280 MAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLG 319
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Frame = +3
Query: 45 KLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNRLQRM-ANSNKFIDN 221
KL E M G+ +D + + K+C L G+ H+ + ++ A S +
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGT 328
Query: 222 CILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLRMLDLGIVP 401
++ Y C +A R F + + + SW+ +IS +++ G +++ I++ + G+V
Sbjct: 329 PLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVL 388
Query: 402 SSSIFCTLLGSFSDPSMLELGKQIHSQLIRIGFTA 506
+S I+ ++ + + + L +G Q H I+ G +
Sbjct: 389 NSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVS 423
>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 175 bits (443), Expect = 4e-42
Identities = 85/169 (50%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
Frame = +3
Query: 3 QLENLHLTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNR 182
+LENLHL SL+KQGKL+E H+F++ MD+A +++ SY+ LF+ CG L +L+DG+L H+R
Sbjct: 53 KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112
Query: 183 LQR-MANSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEA 359
L+R + N + I+NC+L+MYCDC S ++ FDEM+ +L SW I+ISAYA+ G +++A
Sbjct: 113 LRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA 172
Query: 360 IRLLLRMLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIRIGFTA 506
IRL M GI P+S+++ +LL S PS LELGKQIHS +IR A
Sbjct: 173 IRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNA 221
Score = 66.2 bits (160), Expect = 3e-09
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Frame = +3
Query: 21 LTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFH-NRLQRMA 197
++ ++ G+L + + S+ G+ ++S Y +F+ C L+ G H + ++R
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421
Query: 198 NSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLR 377
S + ++ ++ MY C A R F+ + + D +W IIS YA G+ EA+ R
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 378 MLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIR 491
M G+ P++ F +L + S ++ KQ + R
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSR 519
Score = 65.1 bits (157), Expect = 6e-09
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Frame = +3
Query: 21 LTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNRLQR-MA 197
+++ AK G+L + M +GI +S Y L + C L GK H+ + R
Sbjct: 160 ISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQL 219
Query: 198 NSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLR 377
N+N ++ I MY C A+ FD M + +W ++ Y + ++ A+ L R
Sbjct: 220 NANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFAR 279
Query: 378 MLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIRIG 497
M G+ +F +L ++G+QIHS ++++G
Sbjct: 280 MAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLG 319
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Frame = +3
Query: 45 KLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNRLQRM-ANSNKFIDN 221
KL E M G+ +D + + K+C L G+ H+ + ++ A S +
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGT 328
Query: 222 CILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLRMLDLGIVP 401
++ Y C +A R F + + + SW+ +IS +++ G +++ I++ + G+V
Sbjct: 329 PLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVL 388
Query: 402 SSSIFCTLLGSFSDPSMLELGKQIHSQLIRIGFTA 506
+S I+ ++ + + + L +G Q H I+ G +
Sbjct: 389 NSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVS 423
>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 174 bits (441), Expect = 7e-42
Identities = 84/169 (49%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
Frame = +3
Query: 3 QLENLHLTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNR 182
+LENLHL SL+KQGKL+E H+F++ MD+A +++ SY+ LF+ CG L +L+DG+L H+R
Sbjct: 53 KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112
Query: 183 LQR-MANSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEA 359
L+R + N + I+NC+L+MYCDC S ++ FDEM+ +L SW I+ISAYA+ G +++A
Sbjct: 113 LRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA 172
Query: 360 IRLLLRMLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIRIGFTA 506
IRL M GI P+S+++ +LL S PS LELGKQ+HS +IR A
Sbjct: 173 IRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNA 221
Score = 66.2 bits (160), Expect = 3e-09
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Frame = +3
Query: 21 LTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNRLQR-MA 197
+++ AK G+L + M +GI +S Y L + C L GK H+ + R
Sbjct: 160 ISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQL 219
Query: 198 NSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLR 377
N+N ++ I MY C A+ FD M + +W ++ Y + ++ A+ L R
Sbjct: 220 NANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFAR 279
Query: 378 MLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIRIG 497
M G+ +F +L ++GKQIHS ++++G
Sbjct: 280 MAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLG 319
Score = 66.2 bits (160), Expect = 3e-09
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Frame = +3
Query: 21 LTSLAKQGKLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFH-NRLQRMA 197
++ ++ G+L + + S+ G+ ++S Y +F+ C L+ G H + ++R
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421
Query: 198 NSNKFIDNCILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLR 377
S + ++ ++ MY C A R F+ + + D +W IIS YA G+ EA+ R
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 378 MLDLGIVPSSSIFCTLLGSFSDPSMLELGKQIHSQLIR 491
M G+ P++ F +L + S ++ KQ + R
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSR 519
Score = 62.4 bits (150), Expect = 4e-08
Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Frame = +3
Query: 45 KLREVHEFIRSMDEAGITIDSRSYEYLFKMCGMLGALSDGKLFHNRLQRMANSNKF-IDN 221
KL E M G+ +D + + K+C L GK H+ + ++ ++ +
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGT 328
Query: 222 CILQMYCDCKSFTAAERFFDEMVDSDLFSWAIIISAYAEKGHVDEAIRLLLRMLDLGIVP 401
++ Y C +A R F + + + SW+ +IS +++ G +++ I++ + G+V
Sbjct: 329 PLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVL 388
Query: 402 SSSIFCTLLGSFSDPSMLELGKQIHSQLIRIGFTA 506
+S I+ ++ + + + L +G Q H I+ G +
Sbjct: 389 NSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVS 423