BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020874
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   154   5e-36
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   133   2e-29
ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29

>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  157 bits (398), Expect = 6e-37
 Identities = 78/98 (79%), Positives = 83/98 (84%)
 Frame = +3

Query: 99  KFISDQPCLTMLHKHCTTMKDFQKIHAHIIKTGLALDPIAASRVLTFCASPSGDINYAYM 278
           KFISDQPCLTML   CT MKD QKIHAHIIKTGLA   +AASRVLTFCAS SGDINYAY+
Sbjct: 20  KFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAYL 79

Query: 279 VFTRMPRPVSLYSWNTIIRAFSRSSTPHFAISLFVDML 392
           +FT +P P +LY WNTIIR FSRSSTPH AISLFVDML
Sbjct: 80  LFTTIPSP-NLYCWNTIIRGFSRSSTPHLAISLFVDML 116


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  154 bits (390), Expect = 5e-36
 Identities = 76/105 (72%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
 Frame = +3

Query: 99  KFISDQPCLTMLHKHCTTMKDFQKIHAHIIKTGLALDPIAASRVLTFCASPSGDINYAYM 278
           KFIS+ PCLTML  HCTT+  F +I+ HIIKTGL L+PIA++R LTFCASPSG+INYAY 
Sbjct: 23  KFISNHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYK 82

Query: 279 VFTRMPRPVSLYSWNTIIRAFSRSSTPHFAISLFVDML--QCEPK 407
           +F RMP P +LYSWNTIIRAFSRSSTP FAISLFVDML  Q +P+
Sbjct: 83  LFVRMPNP-NLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQ 126


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/99 (71%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
 Frame = +3

Query: 99  KFISDQPCLTMLHKHCTTMKDFQKIHAHIIKTGLALDPIAASRVLTFCA-SPSGDINYAY 275
           KFISD P L++L KHCTTMKD QKIHAH++KTGLA  P+A S VL FCA SP GDINYAY
Sbjct: 19  KFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAY 78

Query: 276 MVFTRMPRPVSLYSWNTIIRAFSRSSTPHFAISLFVDML 392
           +VFT++  P +L+SWNTIIR FS+SSTPH AISLF+DML
Sbjct: 79  LVFTQIHSP-NLFSWNTIIRGFSQSSTPHHAISLFIDML 116


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/102 (62%), Positives = 81/102 (79%)
 Frame = +3

Query: 99  KFISDQPCLTMLHKHCTTMKDFQKIHAHIIKTGLALDPIAASRVLTFCASPSGDINYAYM 278
           K ISDQ  L+ML K+CTTMKD +KIH+ +IKTGLA D  AASR+L FCASP+GDINYAY+
Sbjct: 17  KLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYL 76

Query: 279 VFTRMPRPVSLYSWNTIIRAFSRSSTPHFAISLFVDMLQCEP 404
           VF ++  P ++++WNTIIR FSRSS P  +ISL++DML   P
Sbjct: 77  VFVQIQNP-NIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSP 117


>ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +3

Query: 129 MLHKHCTTMKDFQKIHAHIIKTGLALDPIAASRVLTFCASPSGDINYAYMVFTRMPRPVS 308
           ML K+CT+MKD QKIHA +IKTGLA D IAASRVL FC SP+GDINYAY+VFT++  P +
Sbjct: 1   MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNP-N 59

Query: 309 LYSWNTIIRAFSRSSTPHFAISLFVDMLQCEPKVQ 413
           L+ WNTIIR FS+SSTPH AISLF+DM+   P  Q
Sbjct: 60  LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQ 94