BLASTX nr result

ID: Glycyrrhiza23_contig00020868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020868
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629867.1| Interferon-induced GTP-binding protein Mx [M...   122   4e-26
ref|XP_003629868.1| Interferon-induced GTP-binding protein Mx [M...   121   9e-26
ref|XP_003524214.1| PREDICTED: interferon-induced GTP-binding pr...   111   1e-22
ref|XP_003541684.1| PREDICTED: interferon-induced GTP-binding pr...   107   2e-21
ref|XP_002336508.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18

>ref|XP_003629867.1| Interferon-induced GTP-binding protein Mx [Medicago truncatula]
           gi|355523889|gb|AET04343.1| Interferon-induced
           GTP-binding protein Mx [Medicago truncatula]
          Length = 678

 Score =  122 bits (307), Expect = 4e-26
 Identities = 79/134 (58%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
 Frame = -2

Query: 400 MVVGKKSATKATVGVNQPDEL-LALVHAEEQPQPLAVAVAPIVSSYNEKIRPVLDALENL 224
           +V  K++ TK++V  NQ DE  L+LVH E Q  P++V VAPIVSSYNEKIRPVLDALENL
Sbjct: 2   VVTSKRTTTKSSVSANQRDESSLSLVHVE-QALPISV-VAPIVSSYNEKIRPVLDALENL 59

Query: 223 RRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRRLNITKEGIQLPTIVVVGDQSSGKSS 44
           RR                                 LNI KEGIQLPTIVVVGDQSSGKSS
Sbjct: 60  RR---------------------------------LNIAKEGIQLPTIVVVGDQSSGKSS 86

Query: 43  VLESLAGISLPRGQ 2
           VLESLAGISLPRGQ
Sbjct: 87  VLESLAGISLPRGQ 100


>ref|XP_003629868.1| Interferon-induced GTP-binding protein Mx [Medicago truncatula]
           gi|355523890|gb|AET04344.1| Interferon-induced
           GTP-binding protein Mx [Medicago truncatula]
          Length = 674

 Score =  121 bits (304), Expect = 9e-26
 Identities = 80/136 (58%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
 Frame = -2

Query: 400 MVVGKKSATKATVGVNQPDEL--LALVHAE-EQPQPLAVAVAPIVSSYNEKIRPVLDALE 230
           M +G KS+TKA    N+ DE   L LVH + +QPQPL++A  PIVSSYNEKIRPVLDALE
Sbjct: 1   MTIGNKSSTKA----NKLDESSSLVLVHVDVDQPQPLSIA--PIVSSYNEKIRPVLDALE 54

Query: 229 NLRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRRLNITKEGIQLPTIVVVGDQSSGK 50
           NLRR                                 LNI KEGIQLPTIVVVGDQSSGK
Sbjct: 55  NLRR---------------------------------LNIAKEGIQLPTIVVVGDQSSGK 81

Query: 49  SSVLESLAGISLPRGQ 2
           SSVLESLAGISLPRGQ
Sbjct: 82  SSVLESLAGISLPRGQ 97


>ref|XP_003524214.1| PREDICTED: interferon-induced GTP-binding protein Mx2-like [Glycine
           max]
          Length = 675

 Score =  111 bits (277), Expect = 1e-22
 Identities = 66/107 (61%), Positives = 73/107 (68%)
 Frame = -2

Query: 322 AEEQPQPLAVAVAPIVSSYNEKIRPVLDALENLRRLXXXXXXXXXXXXXXXXXXXXXXXX 143
           +EEQPQPLA+ VAPIVSSYNE+IRPVLDA+ENLRR                         
Sbjct: 25  SEEQPQPLAI-VAPIVSSYNERIRPVLDAMENLRR------------------------- 58

Query: 142 XXXXNLRRLNITKEGIQLPTIVVVGDQSSGKSSVLESLAGISLPRGQ 2
                   LNI+KEGIQLP+IVVVGDQSSGKSSVLESLAGI+LPRGQ
Sbjct: 59  --------LNISKEGIQLPSIVVVGDQSSGKSSVLESLAGINLPRGQ 97


>ref|XP_003541684.1| PREDICTED: interferon-induced GTP-binding protein Mx1-like [Glycine
           max]
          Length = 665

 Score =  107 bits (266), Expect = 2e-21
 Identities = 67/111 (60%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
 Frame = -2

Query: 331 LVHAEEQPQPL-AVAVAPIVSSYNEKIRPVLDALENLRRLXXXXXXXXXXXXXXXXXXXX 155
           L HA  +P+P  A  VAPIVSSYNE+IRPVLDA+ENLRR                     
Sbjct: 10  LDHATPKPEPNEAKHVAPIVSSYNERIRPVLDAVENLRR--------------------- 48

Query: 154 XXXXXXXXNLRRLNITKEGIQLPTIVVVGDQSSGKSSVLESLAGISLPRGQ 2
                       LNITKEGIQLPTIVVVGDQSSGKSSVLESLAGISLPRGQ
Sbjct: 49  ------------LNITKEGIQLPTIVVVGDQSSGKSSVLESLAGISLPRGQ 87


>ref|XP_002336508.1| predicted protein [Populus trichocarpa] gi|222835797|gb|EEE74232.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 61/130 (46%), Positives = 73/130 (56%)
 Frame = -2

Query: 391 GKKSATKATVGVNQPDELLALVHAEEQPQPLAVAVAPIVSSYNEKIRPVLDALENLRRLX 212
           G KS   +    N+ + L  ++  EE+ Q L V   PIVSS+NE+IRP+LDA++ LR L 
Sbjct: 9   GSKSEEMSNSSENEVESLPQII--EEKHQELVVRHVPIVSSFNERIRPLLDAVDKLRHL- 65

Query: 211 XXXXXXXXXXXXXXXXXXXXXXXXXXXNLRRLNITKEGIQLPTIVVVGDQSSGKSSVLES 32
                                            + KEGIQLPTIVVVGDQSSGKSSVLES
Sbjct: 66  --------------------------------QVMKEGIQLPTIVVVGDQSSGKSSVLES 93

Query: 31  LAGISLPRGQ 2
           LAGISLPRGQ
Sbjct: 94  LAGISLPRGQ 103


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