BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020859
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   180   9e-44
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...   163   1e-38
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       162   3e-38
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   160   1e-37
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   160   1e-37

>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score =  180 bits (457), Expect = 9e-44
 Identities = 90/115 (78%), Positives = 99/115 (86%)
 Frame = -2

Query: 346  GIIAHRHIVFADKESEKAMSEPCVELAKLHSIAVDFPKTGAPAVIPPNLYVKGYPDFMEK 167
            GIIA+ H VFADKE  KAMS+ CV+LA+L S AVDFPKTG PAVIPP L+VK YPDFMEK
Sbjct: 867  GIIANAHTVFADKEHLKAMSDQCVKLARLFSTAVDFPKTGVPAVIPPELHVKEYPDFMEK 926

Query: 166  PDKPTYQSSNVIGKLFREVQGISTSAGSITSFTQEVATQSYDSDMEVDGFMDYVD 2
            PDKPTY+S NVIGKLFREV+ ISTSAGSITSFT+ VA  SYD +MEVDGFMDYVD
Sbjct: 927  PDKPTYKSHNVIGKLFREVKEISTSAGSITSFTKLVARDSYDHEMEVDGFMDYVD 981


>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1133

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/115 (69%), Positives = 90/115 (78%)
 Frame = -2

Query: 346  GIIAHRHIVFADKESEKAMSEPCVELAKLHSIAVDFPKTGAPAVIPPNLYVKGYPDFMEK 167
            G+IA+ H   ADKES KAMSEPCVELA+  SIAVDFPKTG PA IP NL  + YPDFMEK
Sbjct: 870  GVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEK 929

Query: 166  PDKPTYQSSNVIGKLFREVQGISTSAGSITSFTQEVATQSYDSDMEVDGFMDYVD 2
            PDKP+Y+S NVIGKLFREV+ I+    SI SFT +VA Q YD DMEVDGF DY+D
Sbjct: 930  PDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYID 984


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/115 (66%), Positives = 93/115 (80%)
 Frame = -2

Query: 346 GIIAHRHIVFADKESEKAMSEPCVELAKLHSIAVDFPKTGAPAVIPPNLYVKGYPDFMEK 167
           G+IA+ H+VFAD+E   AMS+PC+ELA+L SIAVDFPKTG PA IP  L  K YPDFMEK
Sbjct: 550 GVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEK 609

Query: 166 PDKPTYQSSNVIGKLFREVQGISTSAGSITSFTQEVATQSYDSDMEVDGFMDYVD 2
           PDK TY S  VIGKLFREV+  +T A SIT+FT++VA +SYD+D+EVDGF DY+D
Sbjct: 610 PDKTTYHSEKVIGKLFREVKDKTTQASSITTFTRDVARRSYDTDLEVDGFEDYID 664


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/115 (69%), Positives = 91/115 (79%)
 Frame = -2

Query: 346  GIIAHRHIVFADKESEKAMSEPCVELAKLHSIAVDFPKTGAPAVIPPNLYVKGYPDFMEK 167
            GIIA+ H  FADKE  KA S+PC+ELAK  S AVDFPKTG  AVIP +LYVK YPDFMEK
Sbjct: 853  GIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEK 912

Query: 166  PDKPTYQSSNVIGKLFREVQGISTSAGSITSFTQEVATQSYDSDMEVDGFMDYVD 2
            PDKPTY+S NVIGKLFREV+  +    SI SFT +VA++SYD DMEVDGF +YVD
Sbjct: 913  PDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVD 967


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
            gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
            Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
            AltName: Full=RNA-directed RNA polymerase 1
            gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
            [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
            putative RNA-directed RNA polymerase [Arabidopsis
            thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
            polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/115 (69%), Positives = 91/115 (79%)
 Frame = -2

Query: 346  GIIAHRHIVFADKESEKAMSEPCVELAKLHSIAVDFPKTGAPAVIPPNLYVKGYPDFMEK 167
            GIIA+ H  FADKE  KA S+PC+ELAK  S AVDFPKTG  AVIP +LYVK YPDFMEK
Sbjct: 853  GIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEK 912

Query: 166  PDKPTYQSSNVIGKLFREVQGISTSAGSITSFTQEVATQSYDSDMEVDGFMDYVD 2
            PDKPTY+S NVIGKLFREV+  +    SI SFT +VA++SYD DMEVDGF +YVD
Sbjct: 913  PDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVD 967