BLASTX nr result

ID: Glycyrrhiza23_contig00020842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020842
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235447.1| uncharacterized protein LOC100526881 [Glycin...   123   2e-26
ref|XP_003602037.1| RING finger protein [Medicago truncatula] gi...   119   3e-25
ref|XP_003544702.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...   112   2e-23
ref|XP_002307448.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_003542148.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...   108   3e-22

>ref|NP_001235447.1| uncharacterized protein LOC100526881 [Glycine max]
           gi|255631050|gb|ACU15889.1| unknown [Glycine max]
          Length = 202

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/80 (77%), Positives = 69/80 (86%)
 Frame = +2

Query: 2   PDELSYEELIELGEFIGKEKRGLSENEISLCLYPYTYCCQSTIENKTGSVDRCVICQVEY 181
           PDELSYEEL+EL EFIG+E RGLS NEISLCLYPYT  C    E+K+G +DRCVICQVEY
Sbjct: 101 PDELSYEELMELEEFIGEETRGLSANEISLCLYPYTCQC---AESKSG-IDRCVICQVEY 156

Query: 182 EQGEEALVALQCEHPYHTDC 241
           E+G EALVALQCEHPYH+DC
Sbjct: 157 EEG-EALVALQCEHPYHSDC 175


>ref|XP_003602037.1| RING finger protein [Medicago truncatula]
           gi|355491085|gb|AES72288.1| RING finger protein
           [Medicago truncatula]
          Length = 211

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/80 (71%), Positives = 64/80 (80%)
 Frame = +2

Query: 2   PDELSYEELIELGEFIGKEKRGLSENEISLCLYPYTYCCQSTIENKTGSVDRCVICQVEY 181
           PDELSYEELIELG FIG+EKRGL  NEIS CL+PYT    S I   T  +DRCVICQ+EY
Sbjct: 110 PDELSYEELIELGNFIGEEKRGLPANEISSCLHPYT----SKIAESTSGIDRCVICQIEY 165

Query: 182 EQGEEALVALQCEHPYHTDC 241
           E+G E+LVAL C+HPYHTDC
Sbjct: 166 EEG-ESLVALHCDHPYHTDC 184


>ref|XP_003544702.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
          Length = 205

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/79 (69%), Positives = 68/79 (86%)
 Frame = +2

Query: 5   DELSYEELIELGEFIGKEKRGLSENEISLCLYPYTYCCQSTIENKTGSVDRCVICQVEYE 184
           DEL+YEELIELG+FIG+EKRGLS +EI  CL+ +T+    + ENK+G +DRCVICQVEYE
Sbjct: 107 DELTYEELIELGDFIGQEKRGLSAHEICSCLHSHTF---HSAENKSG-IDRCVICQVEYE 162

Query: 185 QGEEALVALQCEHPYHTDC 241
           +G E+LVA+QCEHPYHTDC
Sbjct: 163 EG-ESLVAIQCEHPYHTDC 180


>ref|XP_002307448.1| predicted protein [Populus trichocarpa] gi|222856897|gb|EEE94444.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/79 (68%), Positives = 67/79 (84%)
 Frame = +2

Query: 5   DELSYEELIELGEFIGKEKRGLSENEISLCLYPYTYCCQSTIENKTGSVDRCVICQVEYE 184
           DELSYEELI LGEFIG+EKRGLS NEIS CL+P+ Y    ++ NKTG+ DRCVICQ+EYE
Sbjct: 107 DELSYEELIALGEFIGQEKRGLSVNEISTCLHPWKY---RSLANKTGT-DRCVICQMEYE 162

Query: 185 QGEEALVALQCEHPYHTDC 241
           + +E+LVAL C+HPYH++C
Sbjct: 163 E-DESLVALSCDHPYHSEC 180


>ref|XP_003542148.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
          Length = 203

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = +2

Query: 5   DELSYEELIELGEFIGKEKRGLSENEISLCLYPYTYCCQSTIENKTGSVDRCVICQVEYE 184
           DEL+YEELIELG+FIG+EKRGLS +EI  CL+ + +    + ENK+G +DRCVICQVEYE
Sbjct: 105 DELTYEELIELGDFIGQEKRGLSAHEICSCLHIHIF---HSAENKSG-IDRCVICQVEYE 160

Query: 185 QGEEALVALQCEHPYHTDC 241
           +G E LVA+QCEHPYHTDC
Sbjct: 161 EG-EPLVAIQCEHPYHTDC 178


Top