BLASTX nr result

ID: Glycyrrhiza23_contig00020810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020810
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554715.1| PREDICTED: F-box protein At5g03970-like [Gly...   702   0.0  
ref|XP_003521763.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   693   0.0  
gb|ACU24466.1| unknown [Glycine max]                                  681   0.0  
ref|XP_004139251.1| PREDICTED: F-box protein At5g03970-like [Cuc...   456   e-126
ref|XP_002332007.1| predicted protein [Populus trichocarpa] gi|2...   422   e-115

>ref|XP_003554715.1| PREDICTED: F-box protein At5g03970-like [Glycine max]
          Length = 424

 Score =  702 bits (1812), Expect = 0.0
 Identities = 336/395 (85%), Positives = 359/395 (90%), Gaps = 1/395 (0%)
 Frame = -1

Query: 1408 NSVY-AVLNCDDILHEILLQIPPSTISKLIIVSKRWLHVICSSSFRRRYLSQWGQDFRLL 1232
            NSVY + LNCDDILHEILL+IPP TISKLIIVSK WL VICS SFR+ YL QWGQ FRLL
Sbjct: 28   NSVYPSALNCDDILHEILLRIPPPTISKLIIVSKIWLRVICSPSFRQCYLRQWGQSFRLL 87

Query: 1231 GFFVCNFLYLGRPRDGYRRPSWEPALQFLSTCKEGDDLKLSGILKKRGYFIDCSNGIILS 1052
            GFFVCNFLYLGRPRDGYRRP WEPAL  LSTCK+GDDLKLSGILK  GYFID S GIILS
Sbjct: 88   GFFVCNFLYLGRPRDGYRRPRWEPALPILSTCKDGDDLKLSGILKHLGYFIDSSKGIILS 147

Query: 1051 GTHPKTYYVYNTMTKQQYQLPEPQQFYKTLCMALIVEEYLDGDICYKVIRAKCECKLKER 872
            G HPKTYYVYNT+TKQ+Y+LPEPQQFYK LCMALIVEEYLD DICYKVIRA+CECKLKER
Sbjct: 148  GFHPKTYYVYNTVTKQKYELPEPQQFYKVLCMALIVEEYLDSDICYKVIRARCECKLKER 207

Query: 871  NTVSVETFSSKTGTWKQSTLMCSTSFALRPRTVGMVVGGVVHWFAIWGKLAIYDPRLGDR 692
            NTVS+ET+SSKT  WKQSTLMCST+FAL PRT  MVVGGVVHWFA+WGKLAIYDPRLGDR
Sbjct: 208  NTVSIETYSSKTRQWKQSTLMCSTTFALCPRTAAMVVGGVVHWFAMWGKLAIYDPRLGDR 267

Query: 691  QIALVKLPEGELSLEHEESVLGESSDGLLQYGQSNNLGMEIWVLEKEAGANPSIYSNCTH 512
             IAL+KLP G L+ EHEESVLGESSDGLLQYGQSNNLG+EIW+LEKE+GAN SIY NCTH
Sbjct: 268  YIALIKLPTGVLTHEHEESVLGESSDGLLQYGQSNNLGLEIWILEKESGANSSIYCNCTH 327

Query: 511  LRYKWILRWRLNFKAIWKQVPSLSMHFKETQILSFLPQNSTSVFIRLGWNIILCDLETKT 332
            L+YKWILRWRLNFK +WKQ+PSLS H KETQILSFLPQNSTS+FIR GWNI+LCDLETKT
Sbjct: 328  LKYKWILRWRLNFKVLWKQMPSLSTHSKETQILSFLPQNSTSIFIRSGWNILLCDLETKT 387

Query: 331  VEIVNYQGRGATISWESSKVVPYFLPAWPLSSSVS 227
            VEIVNYQGRG TISWESSKVVPYFLPAWP +SSVS
Sbjct: 388  VEIVNYQGRGGTISWESSKVVPYFLPAWPHTSSVS 422


>ref|XP_003521763.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g03970-like [Glycine
            max]
          Length = 419

 Score =  693 bits (1788), Expect = 0.0
 Identities = 332/405 (81%), Positives = 357/405 (88%), Gaps = 1/405 (0%)
 Frame = -1

Query: 1438 LAPMKSQRTTNSVY-AVLNCDDILHEILLQIPPSTISKLIIVSKRWLHVICSSSFRRRYL 1262
            L   +  +  NSVY A LNCDDILHEILL+IPP TISKLIIVSK WL VICS SFR+ Y+
Sbjct: 13   LTETERMKRNNSVYPAALNCDDILHEILLRIPPPTISKLIIVSKIWLRVICSPSFRQCYV 72

Query: 1261 SQWGQDFRLLGFFVCNFLYLGRPRDGYRRPSWEPALQFLSTCKEGDDLKLSGILKKRGYF 1082
             QWGQ FRLLGFFVCNFLYLGRPRDGYRRP WEPAL  LSTCK+GDDLKLSGILK  GYF
Sbjct: 73   RQWGQSFRLLGFFVCNFLYLGRPRDGYRRPRWEPALPILSTCKDGDDLKLSGILKHLGYF 132

Query: 1081 IDCSNGIILSGTHPKTYYVYNTMTKQQYQLPEPQQFYKTLCMALIVEEYLDGDICYKVIR 902
            +D S GIILSG HPK YYVYNT+TKQ+Y LPEPQQFYK LCMALIVE YLD DICYKVIR
Sbjct: 133  VDSSKGIILSGFHPKAYYVYNTVTKQKYXLPEPQQFYKVLCMALIVEXYLDSDICYKVIR 192

Query: 901  AKCECKLKERNTVSVETFSSKTGTWKQSTLMCSTSFALRPRTVGMVVGGVVHWFAIWGKL 722
             +CECKLKERNTVS+ET+SSK+  WKQSTLMCST+ AL PRT  MVVGGVVHWFA+WGKL
Sbjct: 193  XRCECKLKERNTVSIETYSSKSRQWKQSTLMCSTTLALCPRTAAMVVGGVVHWFAMWGKL 252

Query: 721  AIYDPRLGDRQIALVKLPEGELSLEHEESVLGESSDGLLQYGQSNNLGMEIWVLEKEAGA 542
            AIYDPRLGDR IAL+KLP G L+ EHEESVLGESSDGLLQYGQSNNLG+EIW+LEKEAGA
Sbjct: 253  AIYDPRLGDRYIALIKLPTGVLTHEHEESVLGESSDGLLQYGQSNNLGLEIWILEKEAGA 312

Query: 541  NPSIYSNCTHLRYKWILRWRLNFKAIWKQVPSLSMHFKETQILSFLPQNSTSVFIRLGWN 362
            N SIY NCTHL+YKWILRWRLNFK +WKQ+PSLS H KETQILSFLPQNSTS+FIR GWN
Sbjct: 313  NSSIYCNCTHLKYKWILRWRLNFKVLWKQMPSLSTHSKETQILSFLPQNSTSIFIRSGWN 372

Query: 361  IILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLSSSVS 227
            I+LCDLETKTVEIVNYQGRG TISWESSKVVPYFLPAWP +SSVS
Sbjct: 373  ILLCDLETKTVEIVNYQGRGGTISWESSKVVPYFLPAWPHTSSVS 417


>gb|ACU24466.1| unknown [Glycine max]
          Length = 394

 Score =  681 bits (1757), Expect = 0.0
 Identities = 325/388 (83%), Positives = 349/388 (89%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1417 RTTNSVY-AVLNCDDILHEILLQIPPSTISKLIIVSKRWLHVICSSSFRRRYLSQWGQDF 1241
            +  NSVY A LNCDDILHEILL+IPP TISKLIIVSK WL VICS SFR+ Y+ QWGQ F
Sbjct: 2    KRNNSVYPAALNCDDILHEILLRIPPPTISKLIIVSKIWLRVICSPSFRQCYVRQWGQSF 61

Query: 1240 RLLGFFVCNFLYLGRPRDGYRRPSWEPALQFLSTCKEGDDLKLSGILKKRGYFIDCSNGI 1061
            RLLGFFVCNFLYLGRPRDGYRRP WEPAL  LSTCK+GDDLKLSGILK  GYF+D S GI
Sbjct: 62   RLLGFFVCNFLYLGRPRDGYRRPRWEPALPILSTCKDGDDLKLSGILKHLGYFVDSSKGI 121

Query: 1060 ILSGTHPKTYYVYNTMTKQQYQLPEPQQFYKTLCMALIVEEYLDGDICYKVIRAKCECKL 881
            ILSG HPK YYVYNT+TKQ+Y+LPEPQQFYK LCMALIVEEYLD DICYKVIRA+CECKL
Sbjct: 122  ILSGFHPKAYYVYNTVTKQKYELPEPQQFYKVLCMALIVEEYLDSDICYKVIRARCECKL 181

Query: 880  KERNTVSVETFSSKTGTWKQSTLMCSTSFALRPRTVGMVVGGVVHWFAIWGKLAIYDPRL 701
            KERNTVS+ET+SSK+  WKQSTLMCST+ AL PRT  MVVGGVVHWFA+WGKLAIYDPRL
Sbjct: 182  KERNTVSIETYSSKSRQWKQSTLMCSTTLALCPRTAAMVVGGVVHWFAMWGKLAIYDPRL 241

Query: 700  GDRQIALVKLPEGELSLEHEESVLGESSDGLLQYGQSNNLGMEIWVLEKEAGANPSIYSN 521
            GDR IAL+KLP G L+ EHEESVLGESSDGLLQYGQSNNLG+EIW+LEKEAGAN SIY N
Sbjct: 242  GDRYIALIKLPTGVLTHEHEESVLGESSDGLLQYGQSNNLGLEIWILEKEAGANSSIYCN 301

Query: 520  CTHLRYKWILRWRLNFKAIWKQVPSLSMHFKETQILSFLPQNSTSVFIRLGWNIILCDLE 341
            CTHL+YKWILRWRLNFK +WKQ+PSLS H KETQILSFLPQNSTS+FIR GWNI+LCDLE
Sbjct: 302  CTHLKYKWILRWRLNFKVLWKQMPSLSTHSKETQILSFLPQNSTSIFIRSGWNILLCDLE 361

Query: 340  TKTVEIVNYQGRGATISWESSKVVPYFL 257
            TKTVEIVNYQGRG TISWESSKVVPYFL
Sbjct: 362  TKTVEIVNYQGRGGTISWESSKVVPYFL 389


>ref|XP_004139251.1| PREDICTED: F-box protein At5g03970-like [Cucumis sativus]
            gi|449483040|ref|XP_004156477.1| PREDICTED: F-box protein
            At5g03970-like [Cucumis sativus]
          Length = 410

 Score =  456 bits (1174), Expect = e-126
 Identities = 223/395 (56%), Positives = 292/395 (73%), Gaps = 4/395 (1%)
 Frame = -1

Query: 1411 TNSVYAVLNCDDILHEILLQIPPSTISKLIIVSKRWLHVICSSSFRRRYLSQWGQDFRLL 1232
            ++S+++ L CDDIL EILL++P  +I KLI+VSKRWL +IC+ SF R Y  QWG   RL 
Sbjct: 3    SDSIHSALACDDILTEILLRLPEKSIFKLILVSKRWLSLICNFSFHRSYEKQWGAHTRLF 62

Query: 1231 GFFVCNFLYLGRPRDGYRRPSWEPALQFLSTCKEGDDLKLSGILKKRGYFIDCSNGIILS 1052
            GFFVCNFLY+ RP+DG RRP  EPAL  LSTC+E DDL  SGIL+K GYFID S+G++L 
Sbjct: 63   GFFVCNFLYIDRPQDGVRRPRSEPALPLLSTCQESDDLVSSGILRKLGYFIDYSDGLLLC 122

Query: 1051 GTHPKTYYVYNTMTKQQYQLPEPQQFYKTLCMALIVEE-YLD-GDICYKVIRAKCECKLK 878
            G HPK YYV++++TK + QLP+PQ+ YK LC A I E+  LD GDI Y+V+RA CEC++ 
Sbjct: 123  GRHPKHYYVWDSVTKYRRQLPQPQKHYKYLCTAFITEDPGLDCGDIVYRVVRANCECRVD 182

Query: 877  ERNTVSVETFSSKTGTWKQSTLMCSTSFALRPRTVGMVVGGVVHWFAIWGKLAIYDPRLG 698
              NT+S+ETFSS+T TWKQSTL+CS+ FAL P TVG V+ GV+HWF  +  LAIYDP  G
Sbjct: 183  VINTISIETFSSRTWTWKQSTLVCSSDFALSPWTVGTVIKGVIHWFGTYRSLAIYDPGFG 242

Query: 697  DRQIALVKLPEGELSLEHEESVLGESSDGLLQYGQSNNLGMEIWVLEKEAGANPSIYSN- 521
            +R+I  +KLP G+L+ ++E+S+LG SSDGLLQYGQS  LG+E WVL KE   + S Y+  
Sbjct: 243  ERRITSIKLPTGKLTQDYEDSILGVSSDGLLQYGQSGKLGLETWVLYKEHDDSSSSYTME 302

Query: 520  -CTHLRYKWILRWRLNFKAIWKQVPSLSMHFKETQILSFLPQNSTSVFIRLGWNIILCDL 344
              TH  Y+W+LR +L++K +WKQ P+  +  KETQILSF+ +NS SVFIRLG +I  C++
Sbjct: 303  LDTHYEYRWMLRHKLSYKDLWKQNPNSGLRSKETQILSFIRRNSDSVFIRLGTSIYQCNI 362

Query: 343  ETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLS 239
            ++KT+E+  Y     +I W+  KVVPYF   WP S
Sbjct: 363  KSKTLEVTPYHHGDFSIPWDFCKVVPYFQKIWPQS 397


>ref|XP_002332007.1| predicted protein [Populus trichocarpa] gi|222875232|gb|EEF12363.1|
            predicted protein [Populus trichocarpa]
          Length = 407

 Score =  422 bits (1084), Expect = e-115
 Identities = 218/396 (55%), Positives = 277/396 (69%), Gaps = 5/396 (1%)
 Frame = -1

Query: 1408 NSVYAVLNCDDILHEILLQIPPSTISKLIIVSKRWLHVICSSSFRRRYLSQWGQDFRLLG 1229
            + V A L+ DDIL EILL++PP T+  LIIVSKRWLHVICSS F + YL +W   +R+LG
Sbjct: 6    DGVNAALSSDDILCEILLRVPPETVFSLIIVSKRWLHVICSSVFCQHYLRRWPLAYRMLG 65

Query: 1228 FFVCNFLYLGRPRDGYRRPSWEPALQFLSTCKEGDDLKLSGILKKRGYFIDCSNGIILSG 1049
            FFVCN LYLGR ++G RRP  EPA+  LSTCKEGDDLK S  LK+ GYFID SNG++L G
Sbjct: 66   FFVCNNLYLGRGQNGVRRPRTEPAMPLLSTCKEGDDLKFSKTLKQYGYFIDSSNGLLLCG 125

Query: 1048 THPKTYYVYNTMTKQQYQLPEPQQFYKTLCMALIVEEYLDGDICYKVIRAKCECKLKE-R 872
             HPK Y+V+N +TKQ Y++P+P+ +++ LCMA + E++   D+CYKVIRAKC+  L E  
Sbjct: 126  RHPKRYFVWNPITKQHYKIPKPRVYFEDLCMAFLAEDHPSVDMCYKVIRAKCDFSLDEDM 185

Query: 871  NTVSVETFSSKTGTWKQSTLMCSTSFALRPRTVGMVVGGVVHWFAIWGKLAIYDPRLGDR 692
             TV +ETF+SKT TW  STL C  S +L P +V  VV GVVHW+A    LAIYDP  G+R
Sbjct: 186  KTVPIETFNSKTSTWNFSTLTCVPSLSLCPWSVATVVKGVVHWYAAQRNLAIYDPHNGER 245

Query: 691  QIALVKLPEGELSLEHEESVLGESSDGLLQYGQSNNLGMEIWVLEKEAGANPSIYSNCTH 512
            +++ +KLP    S++ EE VLGES DG LQYG S   G+EIWVLEKE   + +  S+  +
Sbjct: 246  RLSSIKLPG---SIDFEERVLGESFDGRLQYGWSCKSGLEIWVLEKEEAGHATTPSDDGY 302

Query: 511  LRYKWILRWRLNFKAIWKQVPSL----SMHFKETQILSFLPQNSTSVFIRLGWNIILCDL 344
                W LR+RLNFK +WK+ P+      +  KETQILSFL +NS SV IR G +I L  L
Sbjct: 303  PNKGWNLRYRLNFKTMWKKNPTFMTKSCLRDKETQILSFLHRNSKSVCIRSGPDIFLLHL 362

Query: 343  ETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLSS 236
              + VE V Y GRG++ISW+ S+V PYF P WP SS
Sbjct: 363  VNQKVEAVLYNGRGSSISWDFSRVAPYFRPDWPHSS 398


Top