BLASTX nr result

ID: Glycyrrhiza23_contig00020795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020795
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncat...   158   5e-37

>ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncatula]
            gi|355523916|gb|AET04370.1| Pre-mRNA-processing factor
            [Medicago truncatula]
          Length = 1215

 Score =  158 bits (399), Expect = 5e-37
 Identities = 97/178 (54%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
 Frame = +3

Query: 3    VVVPDQASRDSSSNLLVHLPQQN-----KKVSLEKCCDTQSDATNDGLLLMENHVTRFND 167
            V +P+Q  RD SSNL  H+ +       +  ++E     + DA    LL+ E       D
Sbjct: 596  VAMPNQEPRDPSSNLEDHIIRSYDTNTARLQTVESDDKVEDDARELPLLVSEEP----RD 651

Query: 168  TDMVRLQIMESDDKGEDNARELPLSVSEEPRDNDPEKNLASADLXXXXXXXXXXXXNFKN 347
             D  RLQ MESDDK EDNAR+L LSVSEEPR+NDPE+NL+S DL            NFK 
Sbjct: 652  IDTARLQTMESDDKAEDNARDLSLSVSEEPRNNDPERNLSSIDLVGAKEESTKIK-NFKK 710

Query: 348  KWSESDVSSENLLHQTASANQHLQALQASSNENAVFSQGKCELQTEELKPLSVTSMSL 521
              SESD+SSENLLHQ A  NQ  QALQASSNE +V SQGKCEL+TEELKPLSVTS  L
Sbjct: 711  DCSESDISSENLLHQIAIVNQPSQALQASSNEKSVSSQGKCELKTEELKPLSVTSAPL 768


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