BLASTX nr result

ID: Glycyrrhiza23_contig00020768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020768
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28567.1| Homeodomain-like [Medicago truncatula]                 206   7e-51
ref|XP_003534528.1| PREDICTED: uncharacterized protein LOC100792...   206   7e-51
gb|ACU17223.1| unknown [Glycine max]                                  203   3e-50
ref|XP_003624115.1| F-box/kelch-repeat protein [Medicago truncat...   202   6e-50
gb|AEJ72573.1| putative chromatin remodeling complex subunit [Ma...    67   4e-09

>gb|ABD28567.1| Homeodomain-like [Medicago truncatula]
          Length = 906

 Score =  206 bits (523), Expect = 7e-51
 Identities = 105/159 (66%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
 Frame = +1

Query: 58   YNNNIDNCELGFFNSPGSLSISRENSYSNDYPFNCSTAKSNLPHWLREAVITPPMSVEPN 237
            YNNNID  ELGFF+SPGS SISRENSYSNDYPFNCSTAK+NLP WLREA+ TPPMSVEPN
Sbjct: 760  YNNNIDKFELGFFSSPGSSSISRENSYSNDYPFNCSTAKNNLPQWLREAINTPPMSVEPN 819

Query: 238  LSAAVSLSSHPEMLGATDHCFNA-GKSCFVPQNQSSGLKANELHMSNASHYSTYSRRKYG 414
            LSA              +HCF+A GKS F+PQN  +GLK NE+H+SNASHYSTYSRRKYG
Sbjct: 820  LSA--------------EHCFDAGGKSGFLPQNHLTGLKTNEVHISNASHYSTYSRRKYG 865

Query: 415  MMKVNKSLEHHVSKQNDLXXXXXXXXXXXXXXXXHRASL 531
             +K+NKSLEHHVSKQ++L                HRASL
Sbjct: 866  TLKMNKSLEHHVSKQDNLIVIDSDTSSEETISDDHRASL 904


>ref|XP_003534528.1| PREDICTED: uncharacterized protein LOC100792279 [Glycine max]
          Length = 601

 Score =  206 bits (523), Expect = 7e-51
 Identities = 100/156 (64%), Positives = 118/156 (75%)
 Frame = +1

Query: 64  NNIDNCELGFFNSPGSLSISRENSYSNDYPFNCSTAKSNLPHWLREAVITPPMSVEPNLS 243
           NNID  ELGFFNSPGSL ISRENSYSNDY FNCS   ++LPHWLREAV TPP  ++PN+S
Sbjct: 448 NNIDKYELGFFNSPGSLGISRENSYSNDYSFNCSAVTNSLPHWLREAVNTPP--IQPNMS 505

Query: 244 AAVSLSSHPEMLGATDHCFNAGKSCFVPQNQSSGLKANELHMSNASHYSTYSRRKYGMMK 423
           AA+SLSSHPE+ G +D CF+AGKSCFVPQN  +GL  NE++MSN SHYSTYSRRKYG++K
Sbjct: 506 AAISLSSHPEIPGTSDRCFSAGKSCFVPQNWFNGLTPNEIYMSNGSHYSTYSRRKYGVVK 565

Query: 424 VNKSLEHHVSKQNDLXXXXXXXXXXXXXXXXHRASL 531
           +NKSLE  V K ++L                HR+SL
Sbjct: 566 MNKSLEQRVHKPDNLIIIDSDTSSEETISDDHRSSL 601


>gb|ACU17223.1| unknown [Glycine max]
          Length = 210

 Score =  203 bits (517), Expect = 3e-50
 Identities = 99/156 (63%), Positives = 117/156 (75%)
 Frame = +1

Query: 64  NNIDNCELGFFNSPGSLSISRENSYSNDYPFNCSTAKSNLPHWLREAVITPPMSVEPNLS 243
           NNID  ELGF NSPGSL ISRENSYSNDY FNCS   ++LPHWLREAV TPP  ++PN+S
Sbjct: 57  NNIDKYELGFLNSPGSLGISRENSYSNDYSFNCSAVTNSLPHWLREAVNTPP--IQPNMS 114

Query: 244 AAVSLSSHPEMLGATDHCFNAGKSCFVPQNQSSGLKANELHMSNASHYSTYSRRKYGMMK 423
           AA+SLSSHPE+ G +D CF+AGKSCFVPQN  +GL  NE++MSN SHYSTYSRRKYG++K
Sbjct: 115 AAISLSSHPEIPGTSDRCFSAGKSCFVPQNWFNGLTPNEIYMSNGSHYSTYSRRKYGVVK 174

Query: 424 VNKSLEHHVSKQNDLXXXXXXXXXXXXXXXXHRASL 531
           +NKSLE  V K ++L                HR+SL
Sbjct: 175 MNKSLEQRVHKPDNLIIIDSDTSSEETISDDHRSSL 210


>ref|XP_003624115.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355499130|gb|AES80333.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 1144

 Score =  202 bits (515), Expect = 6e-50
 Identities = 103/157 (65%), Positives = 116/157 (73%), Gaps = 1/157 (0%)
 Frame = +1

Query: 58   YNNNIDNCELGFFNSPGSLSISRENSYSNDYPFNCSTAKSNLPHWLREAVITPPMSVEPN 237
            YNNNID  ELGFF+SPGS SISRENSYSNDYPFNCSTAK+NLP WLREA+ TPPMSVEPN
Sbjct: 760  YNNNIDKFELGFFSSPGSSSISRENSYSNDYPFNCSTAKNNLPQWLREAINTPPMSVEPN 819

Query: 238  LSAAVSLSSHPEMLGATDHCFNA-GKSCFVPQNQSSGLKANELHMSNASHYSTYSRRKYG 414
            LSA              +HCF+A GKS F+PQN  +GLK NE+H+SNASHYSTYSRRKYG
Sbjct: 820  LSA--------------EHCFDAGGKSGFLPQNHLTGLKTNEVHISNASHYSTYSRRKYG 865

Query: 415  MMKVNKSLEHHVSKQNDLXXXXXXXXXXXXXXXXHRA 525
             +K+NKSLEHHVSKQ++L                HRA
Sbjct: 866  TLKMNKSLEHHVSKQDNLIVIDSDTSSEETISDDHRA 902


>gb|AEJ72573.1| putative chromatin remodeling complex subunit [Malus x domestica]
          Length = 823

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
 Frame = +1

Query: 109  SLSISRENSYSNDYPFNCSTAKSNLPHWLREAVITPPMSVEPNLSAAVSLSSHPEMLGAT 288
            S +I R    S D P  C  AK NLPHWLREAV +PP    P + + VS  +H + L  T
Sbjct: 684  SRTIRRGKLLSTDGPTTCVGAKGNLPHWLREAVASPP----PTVPSTVSSIAHSDRLNLT 739

Query: 289  DHCFNAGKSCFVPQNQ----SSGLKANELHMSNASHYSTYSRRKYGMMKVNKSLEHHVSK 456
               F+   S   P+N+      GL+ N+    + +    YS    G+ K+ +   HH  K
Sbjct: 740  LLRFDPRGSHLAPRNEMQFTCGGLRVNDSQPLSTAPLFNYSSVGLGIGKLRRDSSHHAGK 799

Query: 457  QN 462
            Q+
Sbjct: 800  QD 801


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