BLASTX nr result
ID: Glycyrrhiza23_contig00020728
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00020728
(1851 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO23078.1| polyprotein [Glycine max] 431 0.0
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera] 302 e-131
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 296 e-127
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [... 291 e-124
gb|ACY01928.1| hypothetical protein [Beta vulgaris] 288 e-122
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 431 bits (1107), Expect(3) = 0.0
Identities = 199/300 (66%), Positives = 245/300 (81%)
Frame = +2
Query: 2 PEQQACLHKFIGFDFKIEHKPGKDNLAADALSRVCYMAWSEPQHEFLQKLRQELLQHSEW 181
PEQQA LHKF+G+DFKIE+KPGKDN AADALSR+ +AWSEP FL++LR L+
Sbjct: 974 PEQQAWLHKFLGYDFKIEYKPGKDNQAADALSRMFMLAWSEPHSIFLEELRARLISDPHL 1033
Query: 182 AAVMKSCQENKCQDPHYSTRDGLLYWKGRLLLPSQSPLIHKVLLEYHSSPIGAHSGITRT 361
+M++ ++ HY+ R+GLLYWK R+++P++ +++K+L EYHSSPIG H+GITRT
Sbjct: 1034 KQLMETYKQG-ADASHYTVREGLLYWKDRVVIPAEEEIVNKILQEYHSSPIGGHAGITRT 1092
Query: 362 LARISAQFYWHNMRTDIRQFIHQCAVCQQAKTPNQLSAGLLQPLPIPQQVWEDVAMDFIT 541
LAR+ AQFYW M+ D++ +I +C +CQQAK+ N L AGLLQPLPIPQQVWEDVAMDFIT
Sbjct: 1093 LARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLPIPQQVWEDVAMDFIT 1152
Query: 542 GLPLSFGCSVIMVVVDRLTKYGHFFALKSDYDSKKVAEVFLKNVVKLHGMPKSIVSDQDK 721
GLP SFG SVIMVV+DRLTKY HF LK+DY+SK VAE F+ ++VKLHG+P+SIVSD+D+
Sbjct: 1153 GLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDR 1212
Query: 722 VFTSKFWQHLFHLSGTTLAMSTAYHPQSDGQSEALNKCLEMYLRCLTFQRPKQWYKALPW 901
VFTS FWQHLF L GTTLAMS+AYHPQSDGQSE LNKCLEMYLRC T++ PK W KALPW
Sbjct: 1213 VFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPW 1272
Score = 288 bits (736), Expect(3) = 0.0
Identities = 134/224 (59%), Positives = 168/224 (75%)
Frame = +3
Query: 909 WYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRDEILQLLKQNLFRA 1088
WYNT+YHMS GMTPF+ALYG++PPTLTR S DDP +V+ QLT RD +L LK NL RA
Sbjct: 1276 WYNTAYHMSLGMTPFRALYGREPPTLTRQACSIDDPAEVREQLTDRDALLAKLKINLTRA 1335
Query: 1089 QQTMKAQADKKRQHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRYFGPFSIVAKVGAV 1268
QQ MK QADKKR + F +GD VLVKLQPYRQ S LRK+QKL MRYFGPF ++AK+G V
Sbjct: 1336 QQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDV 1395
Query: 1269 AYKLQLPSAAKIHPIFHVLQLKLFRGSVDAPYLPLPFTTSEEGPILQPAAVLQRRTVLQG 1448
AYKL+LPSAA+IHP+FHV QLK F G+ PYLPLP T +E GP++QP +L R +++G
Sbjct: 1396 AYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASRIIIRG 1455
Query: 1449 FVTVPQVLIQWTGLDEASATWEDQADVQLSYPNFNLVERLILKG 1580
+ Q+L+QW + ATWED D++ SYP FNL ++++ KG
Sbjct: 1456 HNQIEQILVQWENGLQDEATWEDIEDIKASYPTFNLEDKVVFKG 1499
Score = 25.4 bits (54), Expect(3) = 0.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 1562 KVNFKGEGNVRMPLNQGVPHDDESVEKEELGQLRGKLVTDLNIAGVRKSKR 1714
KV FKGEGNV +++G ++ + E G L KL + ++ K+
Sbjct: 1494 KVVFKGEGNVTNGMSRGEKVNNTAESSSERG-LHNKLADFEELGRGKREKK 1543
>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
Length = 1593
Score = 302 bits (774), Expect(2) = e-131
Identities = 148/304 (48%), Positives = 198/304 (65%), Gaps = 4/304 (1%)
Frame = +2
Query: 2 PEQQACLHKFIGFDFKIEHKPGKDNLAADALSR----VCYMAWSEPQHEFLQKLRQELLQ 169
PEQQ + K +G+D++I +KPGK N AADALSR C + PQ + ++R E
Sbjct: 810 PEQQKWMSKLVGYDYEIVYKPGKTNQAADALSRNMTSPCLNVFFVPQVQVWDEIRHEANS 869
Query: 170 HSEWAAVMKSCQENKCQDPHYSTRDGLLYWKGRLLLPSQSPLIHKVLLEYHSSPIGAHSG 349
+ + + + Q Y R+GL+ + R+++P SPLIH +L E+H +P+G HS
Sbjct: 870 NPYMQRIGQLATKQPRQP--YQWRNGLVCYNNRIVVPPGSPLIHCLLREFHDTPMGGHSR 927
Query: 350 ITRTLARISAQFYWHNMRTDIRQFIHQCAVCQQAKTPNQLSAGLLQPLPIPQQVWEDVAM 529
I RT R+S QFYW +MR + Q++ C VCQ+AK AGLLQPLPIP QVW+D+ M
Sbjct: 928 ILRTYKRLSQQFYWPSMRRSVHQYVAACDVCQKAKAETMSPAGLLQPLPIPCQVWDDITM 987
Query: 530 DFITGLPLSFGCSVIMVVVDRLTKYGHFFALKSDYDSKKVAEVFLKNVVKLHGMPKSIVS 709
DFI GLP S G + IMVVVDRL+K HF A+ Y +K +A F++ VVKLHGMP+SI+S
Sbjct: 988 DFIDGLPRSDGKTSIMVVVDRLSKSAHFIAIAHPYTAKTLANKFVEGVVKLHGMPRSIIS 1047
Query: 710 DQDKVFTSKFWQHLFHLSGTTLAMSTAYHPQSDGQSEALNKCLEMYLRCLTFQRPKQWYK 889
D+D VF S FWQ LSGT L M++AYHPQSDGQ+E +N+C+E YLRC +P+ W
Sbjct: 1048 DRDPVFISNFWQEFLKLSGTKLRMTSAYHPQSDGQTEVVNRCIEQYLRCFVHHKPRHWNS 1107
Query: 890 ALPW 901
LPW
Sbjct: 1108 LLPW 1111
Score = 194 bits (494), Expect(2) = e-131
Identities = 101/219 (46%), Positives = 134/219 (61%)
Frame = +3
Query: 909 WYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRDEILQLLKQNLFRA 1088
WYNT+YH S GMTPF+ALYG+ PP + Y+ ++ Q+T+R+E+LQ LK +L A
Sbjct: 1115 WYNTTYHSSTGMTPFQALYGRPPPAIPSYEIGSCPIEELDDQMTARNELLQELKAHLHAA 1174
Query: 1089 QQTMKAQADKKRQHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRYFGPFSIVAKVGAV 1268
MK ADKKR+ ++F VGD V ++LQPYRQ SV R KL RY+GP+ I ++G V
Sbjct: 1175 NNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLSNRYYGPYEIEERIGPV 1234
Query: 1269 AYKLQLPSAAKIHPIFHVLQLKLFRGSVDAPYLPLPFTTSEEGPILQPAAVLQRRTVLQG 1448
AYKL+L ++IHP+FHV LK G V LP T E LQP VL R V +G
Sbjct: 1235 AYKLKLSPGSRIHPVFHVSLLKKKIGEVAIANDELPPLTEEGVIRLQPRKVLSTRWVNKG 1294
Query: 1449 FVTVPQVLIQWTGLDEASATWEDQADVQLSYPNFNLVER 1565
+ + L+ W GL E ATWED + S+PN NL ++
Sbjct: 1295 STSASESLVLWEGLPEEEATWEDSQQLLRSFPNLNLEDK 1333
>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 296 bits (758), Expect(2) = e-127
Identities = 146/312 (46%), Positives = 200/312 (64%), Gaps = 13/312 (4%)
Frame = +2
Query: 5 EQQACLHKFIGFDFKIEHKPGKDNLAADALSR-------------VCYMAWSEPQHEFLQ 145
E Q + K +G+DF+I +KPG N ADALSR V + W+E
Sbjct: 1069 EFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVELGAIVAVQGVEWAE------- 1121
Query: 146 KLRQELLQHSEWAAVMKSCQENKCQDPHYSTRDGLLYWKGRLLLPSQSPLIHKVLLEYHS 325
LR+E+ S V K QE + H++ DG L +KGR ++PS S +I K+L EYH
Sbjct: 1122 -LRREITGDSFLTQVRKELQEGRTPS-HFTLVDGNLLFKGRYVIPSSSTIIPKLLYEYHD 1179
Query: 326 SPIGAHSGITRTLARISAQFYWHNMRTDIRQFIHQCAVCQQAKTPNQLSAGLLQPLPIPQ 505
+P+G H+G +T R++A++YW MR ++ +++HQC +CQQ K Q GLLQPLPIP
Sbjct: 1180 APMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPIPS 1239
Query: 506 QVWEDVAMDFITGLPLSFGCSVIMVVVDRLTKYGHFFALKSDYDSKKVAEVFLKNVVKLH 685
VWED++MDFI GLP+S G I+V+VDRL+KY HF L+ + + VA++F+K VV+LH
Sbjct: 1240 LVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVADLFVKEVVRLH 1299
Query: 686 GMPKSIVSDQDKVFTSKFWQHLFHLSGTTLAMSTAYHPQSDGQSEALNKCLEMYLRCLTF 865
G P SIVSD+D++F S FW+ LF L GTTL S+AYHPQ+DGQ+E +N+ LE YLRC
Sbjct: 1300 GFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNRALETYLRCFVG 1359
Query: 866 QRPKQWYKALPW 901
P+ W K LPW
Sbjct: 1360 GHPRSWAKWLPW 1371
Score = 186 bits (473), Expect(2) = e-127
Identities = 97/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Frame = +3
Query: 912 YNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRDEILQLLKQNLFRAQ 1091
YNTS H S M+PFK LYG+DPP + R ++ L RD I+ L+ NL RAQ
Sbjct: 1376 YNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQ 1435
Query: 1092 QTMKAQADKKRQHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRYFGPFSIVAKVGAVA 1271
Q MK AD R ++F VGD V ++LQPYRQ S+A R +KL R++GPF+++ ++GA A
Sbjct: 1436 QRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATA 1495
Query: 1272 YKLQLPSAAKIHPIFHVLQLKLFRGSVDAPYLPL--PFTTSEEGPILQPAAVLQRRTVLQ 1445
YKLQLP ++KIHP+FHV LK G + P LP P + +++P +L R + Q
Sbjct: 1496 YKLQLPPSSKIHPVFHVSLLKKVVG--NTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQ 1553
Query: 1446 GFVTVPQVLIQWTGLDEASATWEDQADVQLSYPNFNLVERLILKG 1580
G T + LI+W GL ATWED + + L +P+F+L +++ + G
Sbjct: 1554 GKQTFTECLIKWKGLPAFEATWEDMSPIHLRFPSFHLEDKVNVWG 1598
>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 291 bits (745), Expect(2) = e-124
Identities = 139/304 (45%), Positives = 195/304 (64%), Gaps = 6/304 (1%)
Frame = +2
Query: 8 QQACLHKFIGFDFKIEHKPGKDNLAADALSR------VCYMAWSEPQHEFLQKLRQELLQ 169
QQ K G ++IE+KPG DN ADALSR + + + P L L+ E+ Q
Sbjct: 1094 QQRWASKLSGLKYRIEYKPGVDNKVADALSRRPPTEALSQLTITGPPTIDLTALKAEIQQ 1153
Query: 170 HSEWAAVMKSCQENKCQDPHYSTRDGLLYWKGRLLLPSQSPLIHKVLLEYHSSPIGAHSG 349
E + ++K+ + D ++ DGL+Y KG L++P SP I K+L ++H+SPIG H G
Sbjct: 1154 DHELSQILKNWAQGDHHDSDFTVADGLIYRKGCLVIPVGSPFIPKMLEKFHTSPIGGHEG 1213
Query: 350 ITRTLARISAQFYWHNMRTDIRQFIHQCAVCQQAKTPNQLSAGLLQPLPIPQQVWEDVAM 529
+T R++++ YW +R D+ +I C +CQ+ K AGLL PLPIPQQ+W DV++
Sbjct: 1214 ALKTFKRLTSEVYWRGLRKDVVNYIKGCQICQENKYSTLSPAGLLSPLPIPQQIWSDVSL 1273
Query: 530 DFITGLPLSFGCSVIMVVVDRLTKYGHFFALKSDYDSKKVAEVFLKNVVKLHGMPKSIVS 709
DF+ GLP S + I+VVVDRL+KY HF LK + +K V E F+++VVKLHG P ++VS
Sbjct: 1274 DFVEGLPSSNRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDVVKLHGFPNTLVS 1333
Query: 710 DQDKVFTSKFWQHLFHLSGTTLAMSTAYHPQSDGQSEALNKCLEMYLRCLTFQRPKQWYK 889
D+D++F S FW LF L GT L STAYHPQ+DGQ+E +N+CLE YLRC +RP W++
Sbjct: 1334 DRDRIFLSGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQ 1393
Query: 890 ALPW 901
LPW
Sbjct: 1394 WLPW 1397
Score = 182 bits (462), Expect(2) = e-124
Identities = 99/235 (42%), Positives = 143/235 (60%), Gaps = 9/235 (3%)
Frame = +3
Query: 909 WYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRDEILQLLKQNLFRA 1088
WYNTSYH + TPF+A+YG++PP L RY P + +V+ L RD +L L++NL A
Sbjct: 1401 WYNTSYHSATKTTPFQAVYGREPPVLLRYGDIPTNNANVEELLKDRDGMLVELRENLEIA 1460
Query: 1089 QQTMKAQADKKRQHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRYFGPFSIVAKVGAV 1268
Q MK ADK R+ + F + + V +KL+PYRQ+SVA RK++KL RYFGPF ++ ++G V
Sbjct: 1461 QAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNEKLSQRYFGPFKVLHRIGQV 1520
Query: 1269 AYKLQLPSAAKIHPIFHVLQLKLFRGSVDAPYLPLPFTTSEEGPILQPAAVLQRRTVLQG 1448
AYKLQLP + IHP+FHV QLK +P FT E IL P L+ T +
Sbjct: 1521 AYKLQLPEHSTIHPVFHVSQLK--------RAVPPSFTPQELPKILSP--TLEWNTGPEK 1570
Query: 1449 FVTV--------PQVLIQWTGLDEASATWEDQADVQLSYPNFNLVERL-ILKGRV 1586
+ + P+VL+QW+GL +TWE + YP+F+L +++ +L+G +
Sbjct: 1571 LLDIRQSNTNSGPEVLVQWSGLSTLESTWEPLLTLVQQYPDFDLEDKVSLLRGSI 1625
>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
Length = 1583
Score = 288 bits (738), Expect(2) = e-122
Identities = 148/310 (47%), Positives = 192/310 (61%), Gaps = 10/310 (3%)
Frame = +2
Query: 2 PEQQACLHKFIGFDFKIEHKPGKDNLAADALSR---------VCYMAWSEPQHEFLQKLR 154
P Q + K +GFDF+I++KPG N ADALSR + + S Q Q +R
Sbjct: 1000 PAYQKWVGKLLGFDFEIKYKPGGHNKVADALSRKHPPEAEYNLLTSSHSPHQELIAQAIR 1059
Query: 155 QEL-LQHSEWAAVMKSCQENKCQDPHYSTRDGLLYWKGRLLLPSQSPLIHKVLLEYHSSP 331
Q+ LQH +M + ++ GLL + GRL++P PL +L EYHSSP
Sbjct: 1060 QDADLQH-----LMAEVTAGRTPLQGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSP 1114
Query: 332 IGAHSGITRTLARISAQFYWHNMRTDIRQFIHQCAVCQQAKTPNQLSAGLLQPLPIPQQV 511
+G HSGI +T R++ ++YW M+ D+ F+ C +CQQ KT AGLLQPLPIP +
Sbjct: 1115 MGGHSGIFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAI 1174
Query: 512 WEDVAMDFITGLPLSFGCSVIMVVVDRLTKYGHFFALKSDYDSKKVAEVFLKNVVKLHGM 691
WED++MDF+ GLP S G I+VVVDRL+KY HF LK + + VA VF+K +VKLHG
Sbjct: 1175 WEDISMDFVEGLPKSQGWDTILVVVDRLSKYAHFITLKHPFTAPTVAAVFIKEIVKLHGF 1234
Query: 692 PKSIVSDQDKVFTSKFWQHLFHLSGTTLAMSTAYHPQSDGQSEALNKCLEMYLRCLTFQR 871
P +IVSD+DKVF S FW+ LF L GT L STAYHPQSDGQ+E +NK LE YLRC R
Sbjct: 1235 PSTIVSDRDKVFMSLFWKELFKLQGTLLHRSTAYHPQSDGQTEVVNKSLEAYLRCFCNGR 1294
Query: 872 PKQWYKALPW 901
PK W + + W
Sbjct: 1295 PKAWAQWISW 1304
Score = 177 bits (450), Expect(2) = e-122
Identities = 93/222 (41%), Positives = 138/222 (62%), Gaps = 1/222 (0%)
Frame = +3
Query: 909 WYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRDEILQLLKQNLFRA 1088
WYNTS H S+ TPFK +YG+D P L R++ ++ QL RD L LK +L A
Sbjct: 1308 WYNTSTHSSSHFTPFKIVYGRDSPPLFRFEKGSTAIFSLEEQLLDRDATLDELKFHLLEA 1367
Query: 1089 QQTMKAQADKKRQHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRYFGPFSIVAKVGAV 1268
Q +MK Q DK R+ + F G V +K+QPYR S+A ++++KL R++GPFS++ ++G V
Sbjct: 1368 QNSMKIQEDKHRRAVHFEPGAMVYLKIQPYRHQSLAKKRNEKLAPRFYGPFSVLKRIGQV 1427
Query: 1269 AYKLQLPSAAKIHPIFHVLQLKLFRGSV-DAPYLPLPFTTSEEGPILQPAAVLQRRTVLQ 1445
AY+LQLP AK+HP+FH+ QLK GS+ +P +P P T++ QP ++L R+ Q
Sbjct: 1428 AYQLQLPLGAKLHPVFHISQLKKAVGSLQSSPTIP-PQLTNDLVLDAQPESLLNIRSHPQ 1486
Query: 1446 GFVTVPQVLIQWTGLDEASATWEDQADVQLSYPNFNLVERLI 1571
V +VLI+W L ATWED A +P+F+L ++++
Sbjct: 1487 KPAEVTEVLIKWLNLPAFEATWEDAALFNARFPDFHLEDKVL 1528